Rv0001 - c.600T>A
Drug resistance types
0 Sensitive
0 RR-TB
8 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 4 |
| lineage4.9 | 5 |
| 8 | |
| La1.2.BCG;La1.8.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.3 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage3 | 2 |
| lineage4.1.3 | 2 |
| lineage2.1 | 1 |
| lineage2.1;lineage4.9 | 8 |
| lineage4 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814352 | Other | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR9786604 | Other | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR3675275 | Other | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR6789626 | Other | None | ERR4797588 | MDR-TB | lineage3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4800341 | Other | lineage3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR9787197 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2027263 | Other | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675236 | Other | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR9117709 | Other | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR9786671 | Other | None | SRR3675572 | Other | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR18213713 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None |
|---|
