Rv0006 - c.387C>T
Drug resistance types
12 Sensitive
0 RR-TB
6 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 11 |
| lineage4.8 | 1 |
| lineage4 | 1 |
| 3 | |
| lineage4.3.3 | 1 |
| lineage4.9;lineage6.3 | 5 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7;lineage4.9 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.9 | 4 |
| La3;lineage4.9 | 3 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13292317 | Sensitive | lineage4.1.2.1 | None | ERR12015083 | Other | lineage4.8 | None | ERR2027263 | Other | lineage4 | None | SRR6789626 | Other | None | SRR29127029 | Sensitive | lineage4.3.3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4815340 | Sensitive | lineage4.1.2.1 | gb | SRR1184381 | MDR-TB | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4407463 | HR-TB | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR21710667 | Sensitive | lineage4.1.2.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR16370278 | Sensitive | lineage4.1.2.1 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | ERR13292051 | Sensitive | lineage4.1.2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR29052700 | Sensitive | lineage4.1.2.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR18911560 | Sensitive | lineage4.1.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR16115070 | Sensitive | lineage4.1.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR21728708 | Sensitive | lineage4.1.2.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None |
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