lineage | Count |
---|---|
27 | |
lineage4.9 | 4 |
lineage1.2.1.2.1 | 3 |
lineage4 | 4 |
lineage4.3.2.1 | 1 |
La1.2 | 1 |
lineage2.2 | 3 |
lineage2.2.1 | 2 |
lineage1.1.3.1 | 1 |
La1.8.1 | 1 |
spoligotype | Count |
---|---|
None | 47 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675270 | HR-TB | None | SRR5341418 | Other | None | SRR3675550 | Other | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR768000 | Sensitive | lineage1.2.1.2.1 | th | SRR5535933 | HR-TB | None | SRR5341330 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | SRR6046046 | Other | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045399 | Other | None | SRR6046482 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6896390 | Sensitive | lineage4.3.2.1 | None | ERR4831117 | HR-TB | None | ERR502889 | Other | None | ERR3283055 | HR-TB | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR4769450 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798406 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR5864140 | MDR-TB | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR6866410 | Sensitive | None | SRR10808399 | Sensitive | lineage4 | None | SRR14782405 | HR-TB | None | SRR11972440 | Sensitive | lineage1.2.1.2.1 | None | SRR12199403 | Sensitive | lineage1.2.1.2.1 | None | SRR3675502 | Other | None | SRR1657056 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR158583 | HR-TB | None |
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