lineage | Count |
---|---|
lineage4.9 | 72 |
lineage3 | 14 |
La1.7.1 | 1 |
lineage2.2.1 | 4 |
2 | |
lineage1.1.2 | 11 |
lineage4.1.2.1 | 1 |
lineage4.6.3 | 1 |
lineage1.2.2.2 | 4 |
lineage4.6.1 | 2 |
lineage4.1.2 | 2 |
lineage5.1.1 | 1 |
lineage4.6.1.1 | 3 |
lineage4.6.1.2 | 1 |
lineage4 | 2 |
lineage4.8 | 1 |
lineage2.2 | 2 |
lineage4.9;lineage2.2.1 | 2 |
lineage2.2.2 | 1 |
lineage4.9;lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 128 |
ID | Drug resistance | Lineage | Country iso2 | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861508 | RR-TB | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861542 | RR-TB | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861713 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861695 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861676 | Sensitive | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SAMN02599090 | MDR-TB | lineage3 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR18391667 | Other | La1.7.1 | None | SRR19303931 | Other | lineage2.2.1 | None | ERR4816062 | Sensitive | lineage4.9 | None | SRR3105762 | HR-TB | None | SAMN02599094 | Sensitive | lineage1.1.2 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR1034791 | RR-TB | None | SAMN02599061 | MDR-TB | lineage3 | None | SAMN02599089 | MDR-TB | lineage3 | None | SAMN02598978 | HR-TB | lineage1.1.2 | None | SAMN02599179 | MDR-TB | lineage1.1.2 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR2747607 | Sensitive | lineage4.9 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | ERR4829196 | Other | lineage4.1.2 | None | SRR7131114 | Other | lineage4.1.2 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR1013530 | HR-TB | lineage4.9 | None | ERR473340 | Sensitive | lineage1.1.2 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1106670 | Other | lineage4.9 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172840 | Sensitive | lineage1.1.2 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1172848 | MDR-TB | lineage1.1.2 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1172873 | MDR-TB | lineage1.1.2 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173656 | Sensitive | lineage1.1.2 | None | SRR1173445 | Sensitive | lineage3 | None | SRR1173566 | Other | lineage1.1.2 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR1174327 | Sensitive | lineage1.2.2.2 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR1175025 | Sensitive | lineage2.2.1 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR1175132 | HR-TB | lineage3 | None | SRR1175165 | Sensitive | lineage2.2.1 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1180479 | Other | lineage1.1.2 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861178 | RR-TB | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861207 | Other | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861378 | RR-TB | lineage4.9 | None | SRR13861344 | RR-TB | lineage4.9 | None | SRR13861353 | Other | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861385 | Sensitive | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861402 | Other | lineage4.9 | None |
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