Rv0668 - c.61_63delAGGinsCC
Drug resistance types
43 Sensitive
1 RR-TB
30 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 71 |
| La3;lineage4 | 1 |
| lineage4.1.1.2 | 1 |
| La3;lineage4.9 | 9 |
| lineage4.1.2.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.8.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4 | 2 |
| lineage4.3.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage2.2.1 | 4 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.2.2.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.8 | 1 |
| La1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.2.BCG | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 112 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819241 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | SRR6046210 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR926156 | Other | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1063855 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None |
|---|
