lineage | Count |
---|---|
62 | |
lineage3.1 | 2 |
lineage4 | 30 |
lineage4.4.1.2 | 1 |
lineage4;lineage3.1 | 1 |
lineage4.3.4 | 1 |
lineage2.2.2 | 1 |
lineage4.3.2 | 1 |
lineage2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.3 | 1 |
lineage1.1.3.1 | 1 |
lineage2.2.1 | 2 |
lineage4.9 | 5 |
lineage4.1 | 1 |
lineage2.1 | 1 |
lineage4.4.1 | 1 |
lineage2.2 | 1 |
lineage4.1.1.2 | 1 |
lineage3 | 1 |
lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323063 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR4811105 | HR-TB | None | ERR3797083 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797044 | Other | None | ERR387051 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4810741 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR736875 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9117709 | HR-TB | None | SRR1239337 | Other | None | SRR069989 | HR-TB | lineage2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173484 | Other | lineage4 | None | SRR11972322 | HR-TB | lineage1.1.3.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181050 | MDR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR3675465 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR19304036 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675221 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | ERR1750938 | Other | lineage4.4.1 | None | ERR176643 | HR-TB | None | ERR212034 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675387 | Sensitive | None | ERR4816999 | Other | None | ERR234659 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341387 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4820059 | Other | lineage3 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR2693231 | Other | None | ERR2693257 | Other | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045555 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045158 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6045399 | Other | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325444 | HR-TB | None | ERR4830353 | Other | None | SRR6046497 | Other | lineage4.9 | None | SRR6325448 | HR-TB | None | ERR294248 | HR-TB | None |
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