Rv1305 - c.-141C>T
Drug resistance types
11 Sensitive
0 RR-TB
10 HR-TB
15 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 1 |
| lineage1.1.2 | 11 |
| lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.4.2.1 | 8 |
| lineage4.9 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| 1 | |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR4797050 | MDR-TB | lineage1.1.2 | in | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4820018 | Sensitive | lineage1.1.2 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR4816156 | Sensitive | lineage1.1.2 | gb | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR4821886 | Sensitive | lineage1.1.2 | gb | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR036203 | HR-TB | lineage4.3.4.2.1 | mw | SRR1183111 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR212006 | HR-TB | lineage4.3.4.2.1 | mw | ERR4796638 | Sensitive | lineage1.1.2 | in | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4817305 | Sensitive | lineage1.1.2 | gb | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR036226 | HR-TB | lineage4.3.4.2.1 | mw | ERR4818148 | Sensitive | lineage1.1.2 | None | ERR176477 | HR-TB | lineage4.3.4.2.1 | mw | ERR190352 | HR-TB | lineage4.3.4.2.1 | mw | SRR1180226 | HR-TB | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2514149 | Sensitive | lineage1.1.2 | gb | ERR176765 | HR-TB | lineage4.3.4.2.1 | mw | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR037475 | HR-TB | lineage4.3.4.2.1 | mw | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR987722 | MDR-TB | None | SRR18289201 | Sensitive | lineage1.1.2 | None | SRR30182523 | Sensitive | lineage1.1.2 | None | ERR181768 | Sensitive | lineage4.3.4.2.1 | mw | ERR4817653 | Sensitive | lineage1.1.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
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