lineage | Count |
---|---|
lineage4.3.3 | 47 |
lineage1.2.2.1 | 1 |
lineage4.3.4.1 | 29 |
lineage2.2.1 | 25 |
lineage1.2.2.2 | 9 |
lineage1.1.2 | 12 |
lineage4.4.1.1 | 35 |
lineage4.5 | 5 |
lineage4.8 | 4 |
lineage1.2.1.2.1 | 6 |
lineage4.6.1.2 | 2 |
lineage3 | 1 |
lineage1.2.1.2 | 1 |
lineage4.1.2 | 3 |
lineage4 | 2 |
lineage2.2.1.1 | 1 |
lineage1.1.1 | 1 |
lineage4.4.2 | 1 |
lineage4.1.2.1 | 4 |
lineage1.2.1.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.8.1 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 193 |
ID | Drug resistance | Lineage | Country iso2 | ERR4812621 | MDR-TB | lineage4.3.3 | pe | ERR8975566 | HR-TB | lineage1.2.2.1 | None | ERR4813870 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4798212 | Pre-XDR-TB | lineage2.2.1 | in | ERR4813966 | MDR-TB | lineage4.3.4.1 | br | ERR751458 | MDR-TB | lineage4.3.3 | pe | ERR4799589 | MDR-TB | lineage1.2.2.2 | in | SRR7517815 | MDR-TB | lineage4.3.3 | pe | ERR4799766 | MDR-TB | lineage1.1.2 | in | ERR2516560 | MDR-TB | lineage4.3.3 | pe | ERR7911014 | MDR-TB | lineage4.3.3 | None | ERR2516408 | MDR-TB | lineage4.3.3 | pe | ERR2513358 | HR-TB | lineage1.1.2 | gb | SRR5818699 | MDR-TB | lineage1.1.2 | dj | ERR8975948 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR779912 | MDR-TB | lineage4.3.3 | pe | ERR2515224 | XDR-TB | lineage2.2.1 | za | ERR7911437 | MDR-TB | lineage4.4.1.1 | za | ERR1035357 | MDR-TB | lineage4.3.4.1 | br | SAMN02586000 | MDR-TB | lineage4.4.1.1 | za | ERR4798658 | Pre-XDR-TB | lineage2.2.1 | in | ERR4831945 | HR-TB | lineage4.5 | None | ERR751448 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2707180 | MDR-TB | lineage4.3.4.1 | cd | ERR4813950 | Pre-XDR-TB | lineage4.8 | br | ERR3287727 | MDR-TB | lineage4.3.3 | pe | ERR1352355 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4830499 | MDR-TB | lineage4.4.1.1 | za | ERR2510338 | MDR-TB | lineage1.1.2 | pk | ERR1555059 | MDR-TB | lineage4.8 | None | ERR4812814 | MDR-TB | lineage4.3.3 | None | ERR4813894 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR6152883 | MDR-TB | lineage1.2.1.2.1 | ca | ERR751568 | MDR-TB | lineage4.3.3 | pe | ERR4813932 | MDR-TB | lineage4.3.4.1 | br | ERR1199126 | MDR-TB | lineage4.6.1.2 | cd | ERR4812366 | MDR-TB | lineage4.3.3 | pe | ERR4809173 | MDR-TB | lineage4.4.1.1 | za | SRR2099967 | HR-TB | lineage1.1.2 | None | ERR4799562 | MDR-TB | lineage1.2.2.2 | in | ERR1352353 | Pre-XDR-TB | lineage2.2.1 | cn | ERR751767 | MDR-TB | lineage2.2.1 | th | SRR5073947 | HR-TB | lineage4.5 | vn | SAMN02053774 | MDR-TB | lineage4.4.1.1 | za | ERR2514633 | MDR-TB | lineage4.3.4.1 | gb | ERR5918113 | Pre-XDR-TB | lineage2.2.1 | za | SRR8380872 | MDR-TB | lineage1.1.2 | in | ERR7911446 | MDR-TB | lineage4.4.1.1 | za | ERR4799898 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR2707230 | MDR-TB | lineage4.3.4.1 | cd | ERR8975810 | Pre-XDR-TB | lineage4.4.1.1 | None | SAMN02586002 | MDR-TB | lineage4.4.1.1 | za | ERR1035341 | MDR-TB | lineage4.3.4.1 | br | ERR4813808 | Pre-XDR-TB | lineage4.3.4.1 | br | SAMN02414986 | MDR-TB | lineage2.2.1 | se | ERR4799110 | HR-TB | lineage3 | in | ERR1035280 | MDR-TB | lineage4.3.4.1 | br | SAMN02403494 | MDR-TB | lineage4.4.1.1 | za | ERR3256135 | MDR-TB | lineage1.2.1.2 | ph | ERR4809298 | MDR-TB | lineage4.4.1.1 | za | ERR3256164 | MDR-TB | lineage1.2.1.2.1 | ph | ERR4812971 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4797547 | Pre-XDR-TB | lineage2.2.1 | in | ERR3287664 | MDR-TB | lineage4.3.3 | pe | ERR3256171 | HR-TB | lineage1.2.1.2.1 | ph | SRR2099960 | HR-TB | lineage1.1.2 | None | ERR4813529 | MDR-TB | lineage4.3.3 | None | ERR779915 | MDR-TB | lineage4.3.3 | pe | ERR4829054 | MDR-TB | lineage1.2.2.2 | it | SRR5065670 | HR-TB | lineage2.2.1 | vn | ERR4813949 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR1035330 | MDR-TB | lineage4.3.4.1 | br | ERR2677468 | MDR-TB | lineage1.1.2 | de | ERR1035109 | HR-TB | lineage4.1.2 | vn | ERR4813878 | MDR-TB | lineage4.3.4.1 | br | ERR4813451 | MDR-TB | lineage4.3.3 | pe | ERR2517124 | MDR-TB | lineage1.2.1.2.1 | gb | ERR4799075 | MDR-TB | lineage1.2.2.2 | in | ERR4812973 | Pre-XDR-TB | lineage4.3.3 | pe | SAMEA2534766 | MDR-TB | lineage4.3.3 | uz | ERR4813805 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR5067390 | HR-TB | lineage2.2.1 | vn | ERR1352352 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4816576 | HR-TB | lineage1.1.2 | None | ERR4828816 | MDR-TB | lineage4 | None | SAMN02053771 | MDR-TB | lineage4.4.1.1 | za | SRR7496513 | MDR-TB | lineage1.2.1.2.1 | us | SRR5341368 | MDR-TB | lineage1.1.2 | None | ERR4830871 | MDR-TB | lineage2.2.1.1 | sz | SAMN02586004 | MDR-TB | lineage4.4.1.1 | za | SRR5074115 | HR-TB | lineage1.1.1 | vn | SAMN02403514 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR2707203 | MDR-TB | lineage4.3.4.1 | cd | ERR3287868 | MDR-TB | lineage4.3.3 | pe | SAMN02403515 | MDR-TB | lineage4.4.1.1 | za | ERR3287551 | HR-TB | lineage4.3.3 | None | SAMN02403581 | MDR-TB | lineage4.4.1.1 | za | SAMN02586037 | MDR-TB | lineage4.4.1.1 | za | ERR4813392 | MDR-TB | lineage4.3.3 | pe | ERR1352358 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2516465 | MDR-TB | lineage4.3.3 | pe | ERR1555062 | MDR-TB | lineage4.8 | None | SRR847797 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR4813208 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4831261 | MDR-TB | lineage1.1.2 | de | ERR751587 | MDR-TB | lineage4.3.3 | pe | ERR3287425 | MDR-TB | lineage4.3.3 | pe | ERR4812881 | MDR-TB | lineage4.3.3 | pe | ERR4822345 | MDR-TB | lineage4.4.2 | None | ERR4813445 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975509 | XDR-TB | lineage4.4.1.1 | None | ERR4831753 | HR-TB | lineage4.1.2.1 | vn | SAMN02403535 | MDR-TB | lineage4.4.1.1 | za | ERR4828973 | MDR-TB | lineage4.4.1.1 | None | ERR4813859 | MDR-TB | lineage4.3.4.1 | br | ERR4828848 | MDR-TB | lineage4.3.3 | None | ERR2707176 | MDR-TB | lineage4.3.4.1 | cd | ERR2517031 | MDR-TB | lineage1.2.1.1 | gb | ERR4831627 | MDR-TB | lineage4.5 | vn | ERR2706973 | MDR-TB | lineage4.3.4.1 | cd | ERR2516024 | MDR-TB | lineage2.2.1 | za | ERR2516558 | MDR-TB | lineage4.3.3 | pe | ERR502927 | MDR-TB | lineage2.2.1 | None | ERR2707089 | MDR-TB | lineage4.3.4.1 | cd | SRR5073788 | HR-TB | lineage4.1.2.1 | vn | ERR3276241 | MDR-TB | lineage2.2.1 | nl | ERR4800417 | HR-TB | lineage1.2.2.2 | in | ERR1035039 | MDR-TB | lineage4.3.2.1 | za | ERR4822350 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975817 | Pre-XDR-TB | lineage4.8.1 | None | SAMN02053755 | MDR-TB | lineage4.4.1.1 | za | ERR775374 | MDR-TB | lineage4.3.3 | pe | ERR4796979 | Pre-XDR-TB | lineage2.2.1 | in | ERR2706933 | MDR-TB | lineage4.3.4.1 | cd | ERR751553 | MDR-TB | lineage4.3.3 | pe | ERR2707168 | MDR-TB | lineage4.6.1.2 | cd | ERR4812972 | Pre-XDR-TB | lineage4.3.3 | pe | ERR5917967 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR4830490 | MDR-TB | lineage4.4.1.1 | za | ERR1555058 | MDR-TB | lineage4.8 | None | ERR2707187 | MDR-TB | lineage4.3.4.1 | cd | ERR4813332 | MDR-TB | lineage4.3.3 | None | ERR3287594 | HR-TB | lineage4.3.3 | None | ERR1465741 | HR-TB | lineage4.1.2.1 | pe | ERR2707208 | MDR-TB | lineage4.3.4.1 | cd | ERR4830561 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR1352356 | Pre-XDR-TB | lineage2.2.1 | cn | ERR779855 | HR-TB | lineage4.3.3 | pe | SRR6398042 | HR-TB | lineage1.2.1.2.1 | ca | ERR4813801 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR2864246 | MDR-TB | lineage4.3.4.1 | pt | ERR2515636 | MDR-TB | lineage4.4.1.1 | za | SRR5074141 | HR-TB | lineage4.1.2 | vn | ERR3287789 | MDR-TB | lineage4.3.3 | pe | ERR4797319 | MDR-TB | lineage1.1.2 | in | ERR2516462 | MDR-TB | lineage4.3.3 | pe | ERR1193902 | MDR-TB | lineage4.3.3 | tm | ERR4831743 | HR-TB | lineage4.1.2.1 | None | ERR1352354 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1034720 | MDR-TB | lineage4 | pe | SRR7898216 | MDR-TB | lineage1.2.2.2 | in | ERR4830562 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR3287463 | MDR-TB | lineage4.3.3 | pe | SRR7517767 | MDR-TB | lineage4.3.3 | pe | ERR779922 | MDR-TB | lineage4.3.3 | pe | ERR7911203 | MDR-TB | lineage4.4.1.1 | za | ERR3287552 | HR-TB | lineage4.3.3 | None | ERR1352350 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4812036 | MDR-TB | lineage4.3.3 | pe | SAMN02403495 | MDR-TB | lineage4.4.1.1 | za | ERR1035313 | MDR-TB | lineage4.3.4.1 | br | ERR4800581 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796725 | MDR-TB | lineage1.2.2.2 | in | ERR4813942 | MDR-TB | lineage4.3.4.1 | br | ERR7911438 | MDR-TB | lineage4.4.1.1 | za | ERR1035342 | MDR-TB | lineage4.3.4.1 | br | ERR751354 | MDR-TB | lineage4.3.3 | pe | ERR2707215 | MDR-TB | lineage4.1.2 | cd | ERR1352351 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4832030 | MDR-TB | lineage4.5 | vn | SAMN02403580 | MDR-TB | lineage4.4.1.1 | za | ERR4813770 | MDR-TB | lineage4.3.4.1 | br | SAMN02350492 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR1352357 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02350474 | MDR-TB | lineage4.4.1.1 | za | ERR751628 | MDR-TB | lineage4.3.3 | pe | SRR7517770 | MDR-TB | lineage4.3.3 | pe | ERR4831852 | HR-TB | lineage4.5 | vn | ERR502890 | MDR-TB | lineage2.2.1 | None | ERR161060 | HR-TB | lineage4.3.4.2.1 | mw | ERR8975512 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR2515242 | MDR-TB | lineage4.4.1.1 | za | ERR4799942 | HR-TB | lineage1.2.2.2 | in |
---|