Rv1484 - p.Ile21Thr
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
68 HR-TB
402 MDR-TB
101 Pre-XDR-TB
32 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2.BCG | 4 |
| lineage2.2.1 | 78 |
| lineage4.4.1.1 | 165 |
| lineage4.1.2 | 15 |
| lineage1.1.1.1 | 3 |
| lineage4 | 10 |
| lineage1.1.2 | 23 |
| lineage4.3.3 | 116 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 12 |
| lineage2.2.2 | 6 |
| lineage1.2.1.2 | 6 |
| lineage4.6.2.2 | 3 |
| lineage4.3.4.1 | 64 |
| lineage4.4.2 | 10 |
| lineage1.2.2.2 | 23 |
| lineage4.6.1.2 | 4 |
| lineage4.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.2.1.2.1 | 11 |
| lineage4.3.2;lineage4.3.3 | 1 |
| lineage4.1.2.1 | 9 |
| lineage4.5 | 5 |
| lineage2.2.1;lineage2.2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage3 | 1 |
| lineage1.1.3.1 | 7 |
| lineage1.2.2.1 | 4 |
| lineage4.8.1 | 2 |
| 2 | |
| lineage5.1.1 | 1 |
| lineage1.1.1 | 2 |
| lineage4.7 | 1 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.3;lineage4.3.4.1 | 1 |
| lineage1.1.1.1;lineage4.5 | 1 |
| lineage2.2;lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 603 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6930897 | XDR-TB | La1.2.BCG | None | SRR21276941 | Pre-XDR-TB | lineage2.2.1 | None | SRR1140899 | MDR-TB | lineage4.4.1.1 | None | SRR29056148 | MDR-TB | lineage4.4.1.1 | None | SRR29539857 | HR-TB | lineage4.1.2 | None | SRR28868581 | HR-TB | lineage1.1.1.1 | None | ERR7737688 | MDR-TB | lineage4.4.1.1 | None | SRR29273803 | MDR-TB | lineage4 | None | SRR29274063 | MDR-TB | lineage4 | None | SRR15014679 | MDR-TB | lineage1.1.2 | None | SRR16156786 | HR-TB | lineage2.2.1 | None | SRR9738486 | MDR-TB | lineage4 | None | ERR13260226 | MDR-TB | lineage4.3.3 | None | SRR1196486 | MDR-TB | lineage4.4.1.1 | None | SRR9971130 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR161060 | HR-TB | lineage4.3.4.2.1 | mw | ERR3276241 | MDR-TB | lineage2.2.1 | nl | ERR9119890 | MDR-TB | lineage4.3.3 | None | ERR13285037 | MDR-TB | lineage4.8 | None | ERR9119941 | Pre-XDR-TB | lineage2.2.2 | None | ERR4813693 | MDR-TB | lineage4.3.3 | None | SRR5341368 | MDR-TB | lineage1.1.2 | None | SRR28868626 | HR-TB | lineage1.2.1.2 | None | SRR998762 | MDR-TB | lineage4.1.2 | None | ERR13284468 | MDR-TB | lineage4.6.2.2 | None | ERR13260892 | MDR-TB | lineage4.4.1.1 | None | SRR29231673 | MDR-TB | lineage4.3.4.1 | None | SRR3732576 | MDR-TB | lineage4.3.3 | None | ERR1352354 | XDR-TB | lineage2.2.1 | cn | SRR1140924 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR13283999 | MDR-TB | lineage4.1.2 | None | ERR3077942 | MDR-TB | lineage1.1.2 | None | SRR1196553 | MDR-TB | lineage4.4.1.1 | None | SRR1173339 | MDR-TB | lineage4.4.1.1 | None | SRR16156809 | HR-TB | lineage2.2.1 | None | SRR13870390 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748445 | MDR-TB | lineage4.4.1.1 | None | SRR1184385 | MDR-TB | lineage4.4.1.1 | None | ERR4827664 | HR-TB | lineage2.2.1 | None | SRR924221 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971171 | MDR-TB | lineage4.4.1.1 | None | SRR10525364 | MDR-TB | lineage4 | None | SRR28393730 | HR-TB | lineage4.3.3 | None | SRR12072591 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR25340907 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR9907793 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR29231320 | MDR-TB | lineage4.6.1.2 | None | ERR13290656 | MDR-TB | lineage2.2.1 | None | ERR13260271 | MDR-TB | lineage4.3.3 | None | SRR29772513 | MDR-TB | lineage1.1.2 | None | ERR7737747 | MDR-TB | lineage4.4.1.1 | None | ERR12118066 | MDR-TB | lineage4.3.3 | None | SRR1173321 | MDR-TB | lineage4.4.1.1 | None | SRR18002927 | XDR-TB | lineage2.2.1 | None | ERR13261056 | HR-TB | lineage4.8 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR9907754 | MDR-TB | lineage4.3.4.1 | None | ERR13260239 | MDR-TB | lineage4.3.3 | None | SRR10040323 | MDR-TB | lineage2.2.1 | None | ERR7911014 | MDR-TB | lineage4.3.3 | None | SRR1169220 | MDR-TB | lineage4.4.1.1 | None | ERR9907766 | MDR-TB | lineage4.3.4.1 | None | ERR9907798 | MDR-TB | lineage4.3.4.1 | None | ERR13261625 | MDR-TB | lineage4.3.3 | None | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | ERR6362780 | Pre-XDR-TB | lineage2.2.2 | None | ERR9907778 | MDR-TB | lineage4.3.4.1 | None | ERR6362661 | Pre-XDR-TB | lineage2.2.2 | None | SRR9971164 | MDR-TB | lineage4.4.1.1 | None | SRR29341518 | MDR-TB | lineage4.3 | None | SRR29289427 | XDR-TB | La1.2.BCG | None | ERR1035039 | MDR-TB | lineage4.3.2.1 | za | ERR1035280 | MDR-TB | lineage4.3.4.1 | br | ERR1035313 | MDR-TB | lineage4.3.4.1 | br | ERR10748180 | MDR-TB | lineage4.4.1.1 | None | ERR11775627 | MDR-TB | lineage2.2.1 | None | SRR1172777 | MDR-TB | lineage4.4.1.1 | None | ERR11774892 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR13285318 | HR-TB | lineage1.2.1.2.1 | None | ERR4796979 | Pre-XDR-TB | lineage2.2.1 | in | ERR13260557 | MDR-TB | lineage4.3.3 | None | SRR1167345 | MDR-TB | lineage4.4.1.1 | None | ERR4797319 | MDR-TB | lineage1.1.2 | in | SRR29231748 | MDR-TB | lineage4.3.4.1 | None | ERR11081996 | MDR-TB | lineage4.6.2.2 | None | ERR4799589 | MDR-TB | lineage1.2.2.2 | in | ERR4799562 | MDR-TB | lineage1.2.2.2 | in | ERR4799075 | MDR-TB | lineage1.2.2.2 | in | SRR28393586 | MDR-TB | lineage4.3.2;lineage4.3.3 | None | SRR9971027 | MDR-TB | lineage4.4.1.1 | None | ERR8774260 | Pre-XDR-TB | lineage2.2.2 | None | SRR29539173 | MDR-TB | lineage4.3.3 | None | ERR11488438 | HR-TB | lineage4.4.1.1 | None | ERR4822345 | MDR-TB | lineage4.4.2 | None | ERR4822350 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865994 | MDR-TB | lineage4.3.3 | None | SAMN02403580 | MDR-TB | lineage4.4.1.1 | za | SRR16156784 | HR-TB | lineage2.2.1 | None | SRR1165500 | MDR-TB | lineage2.2.1 | None | SRR998763 | MDR-TB | lineage4.1.2 | None | ERR4813208 | Pre-XDR-TB | lineage4.3.3 | pe | ERR9907762 | MDR-TB | lineage4.3.4.1 | None | ERR4813894 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR3287425 | MDR-TB | lineage4.3.3 | pe | ERR3287868 | MDR-TB | lineage4.3.3 | pe | ERR11775971 | MDR-TB | lineage1.2.1.2 | None | ERR3287727 | MDR-TB | lineage4.3.3 | pe | SRR28394094 | MDR-TB | lineage4.3.3 | None | SRR1002693 | HR-TB | lineage4.3.3 | None | SRR10040237 | MDR-TB | lineage2.2.1 | None | SRR28393771 | MDR-TB | lineage4.3.3 | None | ERR3287551 | HR-TB | lineage4.3.3 | None | SRR28393983 | MDR-TB | lineage4.3.3 | None | SRR28393458 | MDR-TB | lineage4.3.3 | None | ERR4812972 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4812973 | Pre-XDR-TB | lineage4.3.3 | pe | SRR6398042 | HR-TB | lineage1.2.1.2.1 | ca | ERR751628 | MDR-TB | lineage4.3.3 | pe | ERR779922 | MDR-TB | lineage4.3.3 | pe | SRR28351527 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1162870 | MDR-TB | lineage2.2.1 | None | SRR1173317 | MDR-TB | lineage4.4.1.1 | None | SRR6152883 | MDR-TB | lineage1.2.1.2.1 | ca | ERR4813932 | MDR-TB | lineage4.3.4.1 | br | ERR4813949 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR4831743 | HR-TB | lineage4.1.2.1 | None | ERR4809298 | MDR-TB | lineage4.4.1.1 | za | ERR4831852 | HR-TB | lineage4.5 | vn | ERR4832030 | MDR-TB | lineage4.5 | vn | ERR4828848 | MDR-TB | lineage4.3.3 | None | SRR9971286 | MDR-TB | lineage4.4.1.1 | None | ERR2706973 | MDR-TB | lineage4.3.4.1 | cd | ERR2707208 | MDR-TB | lineage4.3.4.1 | cd | ERR2707203 | MDR-TB | lineage4.3.4.1 | cd | ERR4812814 | MDR-TB | lineage4.3.3 | None | ERR2707176 | MDR-TB | lineage4.3.4.1 | cd | ERR4813445 | Pre-XDR-TB | lineage4.3.3 | None | ERR12118026 | MDR-TB | lineage4.3.3 | None | ERR751587 | MDR-TB | lineage4.3.3 | pe | ERR7911437 | MDR-TB | lineage4.4.1.1 | za | ERR7911438 | MDR-TB | lineage4.4.1.1 | za | ERR4813878 | MDR-TB | lineage4.3.4.1 | br | ERR779912 | MDR-TB | lineage4.3.3 | pe | ERR1555058 | MDR-TB | lineage4.8 | None | ERR4830499 | MDR-TB | lineage4.4.1.1 | za | ERR779855 | HR-TB | lineage4.3.3 | pe | ERR552610 | MDR-TB | lineage4.3.3 | None | SAMN02231157 | MDR-TB | lineage4.1.2 | None | SRR10315510 | MDR-TB | lineage4.4.1.1 | None | ERR8975512 | XDR-TB | lineage4.4.1.1 | None | SRR10869281 | Pre-XDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR8975810 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR6362510 | MDR-TB | lineage4.3.3 | None | ERR1193902 | MDR-TB | lineage4.3.3 | tm | SRR7898216 | MDR-TB | lineage1.2.2.2 | in | ERR4812366 | MDR-TB | lineage4.3.3 | pe | ERR2514633 | MDR-TB | lineage4.3.4.1 | gb | ERR2515242 | MDR-TB | lineage4.4.1.1 | za | SRR28393254 | MDR-TB | lineage4.3.3 | None | SRR29230794 | MDR-TB | lineage4.3.4.1 | None | ERR13439853 | HR-TB | lineage4.1.2.1 | None | SRR1167376 | MDR-TB | lineage4.4.1.1 | None | SAMN02053755 | MDR-TB | lineage4.4.1.1 | za | SRR7517815 | MDR-TB | lineage4.3.3 | pe | SRR1184309 | MDR-TB | lineage4.4.1.1 | None | ERR13276352 | MDR-TB | lineage1.2.2.2 | None | SRR5065670 | HR-TB | lineage2.2.1 | vn | SRR5067390 | HR-TB | lineage2.2.1 | vn | ERR2677468 | MDR-TB | lineage1.1.2 | de | SRR29273603 | MDR-TB | lineage4 | None | SRR29273895 | MDR-TB | lineage4 | None | SRR7592368 | MDR-TB | lineage4 | None | SRR16156808 | HR-TB | lineage2.2.1 | None | SRR10040157 | Pre-XDR-TB | lineage4.4.2 | None | ERR9907717 | MDR-TB | lineage4.3.4.1 | None | ERR9907787 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR10748251 | MDR-TB | lineage4.4.1.1 | None | SRR1165620 | MDR-TB | lineage4.4.1.1 | None | ERR13290930 | MDR-TB | lineage2.2.1 | None | ERR270677 | HR-TB | lineage1.1.2 | None | SRR29772777 | MDR-TB | lineage1.2.2.2 | None | ERR11043755 | MDR-TB | lineage4.1.2 | None | SRR19276635 | MDR-TB | lineage4.3.2 | None | SRR26399837 | HR-TB | lineage1.1.1.1 | None | SRR12882734 | HR-TB | lineage1.2.1.2 | None | ERR10748185 | MDR-TB | lineage4.4.1.1 | None | ERR9992640 | XDR-TB | lineage4.4.1.1 | None | ERR9907681 | MDR-TB | lineage4.3.4.1 | None | ERR9993151 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR7737649 | MDR-TB | lineage4.4.1.1 | None | ERR9993071 | XDR-TB | lineage4.4.1.1 | None | ERR13288934 | XDR-TB | lineage4.4.1.1 | None | SRR16100723 | MDR-TB | lineage2.2.1 | None | ERR13260413 | Pre-XDR-TB | lineage4.3.3 | None | ERR10610092 | MDR-TB | lineage4.4.1.1 | None | ERR4024607 | MDR-TB | lineage4.3.3 | None | SRR29231836 | MDR-TB | lineage4.3.4.1 | None | SRR29126670 | HR-TB | lineage6.3.1 | None | SRR7782647 | MDR-TB | lineage4.3.3 | None | SRR11348136 | MDR-TB | lineage1.1.2 | None | SRR3732578 | MDR-TB | lineage4.3.3 | None | ERR13258437 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR13285137 | MDR-TB | lineage1.2.2.2 | None | ERR13260539 | MDR-TB | lineage4.3.3 | None | ERR4813821 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR25340924 | HR-TB | lineage1.2.2.2 | None | SRR10315463 | MDR-TB | lineage4.4.1.1 | None | ERR10610045 | MDR-TB | lineage4.4.1.1 | None | ERR10748268 | MDR-TB | lineage4.4.1.1 | None | ERR11080929 | MDR-TB | lineage4.8 | None | SRR1169217 | MDR-TB | lineage4.4.1.1 | None | ERR13283980 | MDR-TB | lineage4.1.2 | None | SRR1169310 | MDR-TB | lineage4.4.1.1 | None | ERR13260272 | MDR-TB | lineage4.3.3 | None | SRR25340814 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR25207265 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510338 | MDR-TB | lineage1.1.2 | pk | ERR1035330 | MDR-TB | lineage4.3.4.1 | br | ERR9907730 | MDR-TB | lineage4.3.4.1 | None | ERR9806649 | MDR-TB | lineage4.4.1.1 | None | SRR29289208 | XDR-TB | La1.2.BCG | None | ERR13253355 | MDR-TB | lineage4.4.2 | None | SRR15600389 | MDR-TB | lineage2.2.1.1 | None | ERR1352350 | XDR-TB | lineage2.2.1 | cn | SRR1019160 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9217357 | MDR-TB | lineage1.2.2.2 | None | SRR1173187 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4799898 | MDR-TB | lineage1.2.2.2 | in | ERR4800417 | HR-TB | lineage1.2.2.2 | in | ERR1035342 | MDR-TB | lineage4.3.4.1 | br | ERR4799942 | HR-TB | lineage1.2.2.2 | in | ERR9907795 | MDR-TB | lineage4.3.4.1 | None | ERR4799110 | HR-TB | lineage3 | in | SRR1173150 | MDR-TB | lineage4.4.1.1 | None | SRR21277291 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937075 | HR-TB | lineage2.2.1 | None | ERR502890 | MDR-TB | lineage2.2.1 | None | SRR6511607 | MDR-TB | lineage4.3.4.1 | None | SAMN02403535 | MDR-TB | lineage4.4.1.1 | za | ERR7362006 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02586002 | MDR-TB | lineage4.4.1.1 | za | SAMN02586037 | MDR-TB | lineage4.4.1.1 | za | SAMN02403581 | MDR-TB | lineage4.4.1.1 | za | ERR13191363 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR24498058 | MDR-TB | lineage1.1.3.1 | None | ERR2864246 | MDR-TB | lineage4.3.4.1 | pt | ERR4813805 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR4809173 | MDR-TB | lineage4.4.1.1 | za | ERR3287463 | MDR-TB | lineage4.3.3 | pe | ERR4813942 | MDR-TB | lineage4.3.4.1 | br | ERR3287552 | HR-TB | lineage4.3.3 | None | ERR4812036 | MDR-TB | lineage4.3.3 | pe | SRR22461660 | MDR-TB | lineage4 | None | SRR5306022 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812621 | MDR-TB | lineage4.3.3 | pe | SRR28045492 | XDR-TB | lineage1.2.2.2 | None | SRR28393539 | MDR-TB | lineage4.1.2.1 | None | SRR28394302 | MDR-TB | lineage4.3.3 | None | SRR28393324 | MDR-TB | lineage4.3.3 | None | ERR751354 | MDR-TB | lineage4.3.3 | pe | ERR9992627 | XDR-TB | lineage4.4.1.1 | None | ERR4813859 | MDR-TB | lineage4.3.4.1 | br | ERR4831945 | HR-TB | lineage4.5 | None | ERR5918113 | Pre-XDR-TB | lineage2.2.1 | za | ERR2707187 | MDR-TB | lineage4.3.4.1 | cd | ERR4830490 | MDR-TB | lineage4.4.1.1 | za | ERR4828973 | MDR-TB | lineage4.4.1.1 | None | ERR2707215 | MDR-TB | lineage4.1.2 | cd | ERR4830871 | MDR-TB | lineage2.2.1.1 | sz | ERR4828816 | MDR-TB | lineage4 | None | ERR502927 | MDR-TB | lineage2.2.1 | None | ERR1555059 | MDR-TB | lineage4.8 | None | ERR7911203 | MDR-TB | lineage4.4.1.1 | za | ERR751568 | MDR-TB | lineage4.3.3 | pe | ERR4813801 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR779915 | MDR-TB | lineage4.3.3 | pe | ERR4812881 | MDR-TB | lineage4.3.3 | pe | SRR29772468 | MDR-TB | lineage1.2.2.1 | None | ERR4830561 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4830562 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4813332 | MDR-TB | lineage4.3.3 | None | ERR751448 | Pre-XDR-TB | lineage4.3.3 | pe | SRR1184317 | MDR-TB | lineage4.4.1.1 | None | SRR6797288 | MDR-TB | lineage1.1.3.1 | None | ERR8975817 | Pre-XDR-TB | lineage4.8.1 | None | ERR8975566 | HR-TB | lineage1.2.2.1 | None | SRR28393642 | MDR-TB | lineage4.1.2.1 | None | SRR1184372 | MDR-TB | None | SRR21276932 | Pre-XDR-TB | lineage2.2.1 | None | SRR832977 | MDR-TB | lineage4.4.1.1 | None | ERR1199126 | MDR-TB | lineage4.6.1.2 | cd | ERR1465741 | HR-TB | lineage4.1.2.1 | pe | ERR2707089 | MDR-TB | lineage4.3.4.1 | cd | ERR2707168 | MDR-TB | lineage4.6.1.2 | cd | ERR2516465 | MDR-TB | lineage4.3.3 | pe | ERR2516560 | MDR-TB | lineage4.3.3 | pe | ERR2516462 | MDR-TB | lineage4.3.3 | pe | ERR2515224 | XDR-TB | lineage2.2.1 | za | ERR2516024 | MDR-TB | lineage2.2.1 | za | ERR2515636 | MDR-TB | lineage4.4.1.1 | za | ERR7911350 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165645 | MDR-TB | lineage4.4.1.1 | None | ERR1352351 | XDR-TB | lineage2.2.1 | cn | ERR1352355 | XDR-TB | lineage2.2.1 | cn | SRR16156806 | HR-TB | lineage2.2.1 | None | SRR8380872 | MDR-TB | lineage1.1.2 | in | SRR3732580 | MDR-TB | lineage4.3.3 | None | SRR26056461 | HR-TB | lineage1.2.2.2 | None | SAMN02053771 | MDR-TB | lineage4.4.1.1 | za | SAMN02053774 | MDR-TB | lineage4.4.1.1 | za | ERR11776027 | MDR-TB | lineage4.3.3 | None | SRR7517767 | MDR-TB | lineage4.3.3 | pe | SRR7517770 | MDR-TB | lineage4.3.3 | pe | SRR29231559 | MDR-TB | lineage4.3.4.1 | None | ERR4816576 | HR-TB | lineage1.1.2 | None | SRR12062492 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971188 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR28394027 | MDR-TB | lineage4.1.2.1 | None | ERR4162002 | HR-TB | lineage5.1.1 | None | SAMN02403514 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02403515 | MDR-TB | lineage4.4.1.1 | za | ERR6866073 | MDR-TB | lineage4.3.3 | None | SRR9971052 | MDR-TB | lineage4.4.1.1 | None | SRR9971177 | MDR-TB | lineage4.4.1.1 | None | SRR5074115 | HR-TB | lineage1.1.1 | vn | SRR5818699 | MDR-TB | lineage1.1.2 | dj | SRR1167316 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4025079 | MDR-TB | lineage4.3.3 | None | ERR1035357 | MDR-TB | lineage4.3.4.1 | br | ERR9907693 | MDR-TB | lineage4.3.4.1 | None | SRR6832793 | MDR-TB | lineage4.3.3 | None | SRR16156764 | HR-TB | lineage2.2.1 | None | ERR4813529 | MDR-TB | lineage4.3.3 | None | SRR1173095 | MDR-TB | lineage4.4.1.1 | None | SRR28239961 | HR-TB | lineage4.3.3 | None | SRR6930921 | MDR-TB | lineage1.2.1.2 | None | SRR29772668 | MDR-TB | lineage1.2.2.1 | None | ERR4797547 | Pre-XDR-TB | lineage2.2.1 | in | SRR29017592 | MDR-TB | lineage1.1.3.1 | None | SRR29055912 | MDR-TB | lineage4.7 | None | SRR19276634 | MDR-TB | lineage4.3.3 | None | ERR9907756 | MDR-TB | lineage4.3.4.1 | None | ERR13261080 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR12117919 | MDR-TB | lineage4.3.3 | None | SRR1184384 | MDR-TB | lineage4.4.1.1 | None | SRR6257066 | HR-TB | lineage4.3.3 | None | ERR13291939 | MDR-TB | lineage2.2.1 | None | SRR12062494 | Pre-XDR-TB | lineage4.4.2 | None | ERR13298139 | MDR-TB | lineage4.4.2 | None | ERR2197001 | MDR-TB | lineage4.5 | None | SRR14801644 | MDR-TB | lineage4.8 | None | SRR29772715 | Pre-XDR-TB | lineage1.2.2.1 | None | SRR1173786 | MDR-TB | lineage4.4.1.1 | None | ERR7363120 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR29055610 | MDR-TB | lineage2.2.1 | None | SRR29539176 | MDR-TB | lineage4.3.3 | None | ERR4813843 | Pre-XDR-TB | lineage4.8 | None | ERR13260081 | XDR-TB | La1.2.BCG | None | SRR29230785 | MDR-TB | lineage4.3.4.1 | None | DRR130115 | MDR-TB | lineage4.4.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR28045264 | HR-TB | lineage1.2.2.2 | None | ERR13290922 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | ERR13260348 | MDR-TB | lineage4.3.3 | None | ERR12115304 | MDR-TB | lineage1.1.3.1 | None | ERR9124906 | HR-TB | lineage1.2.1.2.1 | None | SRR15368986 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737904 | MDR-TB | lineage4.4.1.1 | None | SRR1165244 | MDR-TB | lineage4.4.1.1 | None | SRR1173499 | MDR-TB | lineage4.4.1.1 | None | SRR1175355 | MDR-TB | lineage4.4.1.1 | None | ERR11043530 | MDR-TB | lineage1.2.2.2 | None | SRR12062529 | Pre-XDR-TB | lineage4.4.2 | None | ERR9119940 | Pre-XDR-TB | lineage2.2.2 | None | SRR1196716 | MDR-TB | lineage4.4.1.1 | None | ERR11773735 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR6856035 | MDR-TB | lineage4.4.1.1 | None | ERR11488439 | MDR-TB | lineage4.4.1.1 | None | SRR1165254 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR19276637 | MDR-TB | lineage4.3.3 | None | ERR9907725 | MDR-TB | lineage4.3.4.1 | None | ERR9907709 | MDR-TB | lineage4.3.4.1 | None | ERR13260653 | MDR-TB | lineage4.3.3 | None | ERR13284780 | MDR-TB | lineage4.8 | None | ERR4553479 | MDR-TB | lineage1.1.3.1 | None | SRR9971105 | XDR-TB | lineage4.4.1.1 | None | ERR13261699 | MDR-TB | lineage4.3.3 | None | SRR29914410 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799902 | MDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR29231848 | MDR-TB | lineage4.3.4.1 | None | ERR4796725 | MDR-TB | lineage1.2.2.2 | in | ERR4423635 | Pre-XDR-TB | lineage2.2.2 | None | ERR4799766 | HR-TB | lineage1.1.2 | in | ERR13261608 | MDR-TB | lineage4.3.3 | None | ERR13261564 | MDR-TB | lineage4.3.3 | None | ERR9993107 | XDR-TB | lineage4.4.1.1 | None | SRR1173595 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR833117 | MDR-TB | lineage4.4.1.1 | None | ERR4800581 | Pre-XDR-TB | lineage2.2.1 | in | SRR29231686 | MDR-TB | lineage4.1.2 | None | SRR998761 | MDR-TB | lineage4.1.2 | None | SAMN02414986 | MDR-TB | lineage2.2.1 | se | ERR13290653 | MDR-TB | lineage2.2.1 | None | ERR7737843 | MDR-TB | lineage4.4.1.1 | None | ERR10748179 | Pre-XDR-TB | lineage4.8.1 | None | SRR1172090 | MDR-TB | lineage4.4.1.1 | None | ERR9907719 | MDR-TB | lineage4.3.4.1 | None | DRR130109 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865563 | MDR-TB | lineage4.3.3 | None | ERR4813770 | MDR-TB | lineage4.3.4.1 | br | SRR1167344 | MDR-TB | lineage4.4.1.1 | None | ERR4813950 | Pre-XDR-TB | lineage4.8 | br | ERR3287594 | HR-TB | lineage4.3.3 | None | ERR751767 | MDR-TB | lineage2.2.1 | th | SRR28393889 | MDR-TB | lineage4.3.3 | None | SRR28393916 | HR-TB | lineage4.3.3 | None | ERR3287664 | MDR-TB | lineage4.3.3 | pe | SRR28394283 | MDR-TB | lineage4.3.3 | None | SRR22461616 | HR-TB | lineage4.3.3 | None | SRR28394214 | MDR-TB | lineage4.3.3 | None | SRR1165559 | MDR-TB | lineage2.2.1 | None | ERR11774887 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR10748274 | MDR-TB | lineage4.4.1.1 | None | ERR11775609 | MDR-TB | lineage2.2.1 | None | SRR28393550 | MDR-TB | lineage4.3.3 | None | ERR4813808 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR10315616 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR2707180 | MDR-TB | lineage4.3.4.1 | cd | ERR2707230 | MDR-TB | lineage4.3.4.1 | cd | ERR2706933 | MDR-TB | lineage4.3.4.1 | cd | SRR28394206 | MDR-TB | lineage4.3.3 | None | ERR775374 | MDR-TB | lineage4.3.3 | pe | ERR4829054 | MDR-TB | lineage1.2.2.2 | it | ERR7911446 | MDR-TB | lineage4.4.1.1 | za | ERR1555062 | MDR-TB | lineage4.8 | None | ERR751553 | MDR-TB | lineage4.3.3 | pe | ERR751458 | MDR-TB | lineage4.3.3 | pe | ERR5917967 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR11068959 | MDR-TB | lineage4.8 | None | ERR11080830 | MDR-TB | lineage1.1.2 | None | SRR28393352 | MDR-TB | lineage4.3.3 | None | ERR10748224 | MDR-TB | lineage4.4.1.1 | None | SRR21887747 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196558 | MDR-TB | lineage4.4.1.1 | None | SRR833017 | MDR-TB | lineage4.4.1.1 | None | ERR8975948 | XDR-TB | lineage4.4.1.1 | None | SAMEA2534766 | MDR-TB | lineage4.3.3 | uz | SRR2099960 | HR-TB | lineage1.1.2 | None | SRR2099967 | HR-TB | lineage1.1.2 | None | ERR2517031 | MDR-TB | lineage1.2.1.1 | gb | ERR2517124 | MDR-TB | lineage1.2.1.2.1 | gb | ERR2516408 | MDR-TB | lineage4.3.3 | pe | ERR2516558 | MDR-TB | lineage4.3.3 | pe | ERR2513358 | HR-TB | lineage1.1.2 | gb | ERR1352357 | XDR-TB | lineage2.2.1 | cn | ERR1352356 | XDR-TB | lineage2.2.1 | cn | ERR1352358 | XDR-TB | lineage2.2.1 | cn | ERR1352353 | XDR-TB | lineage2.2.1 | cn | ERR11773748 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR28858366 | MDR-TB | lineage4.3.3 | None | ERR6866155 | MDR-TB | lineage4.3.3 | None | ERR1034720 | MDR-TB | lineage4 | pe | ERR1035109 | HR-TB | lineage4.1.2 | vn | SRR847797 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02350474 | MDR-TB | lineage4.4.1.1 | za | SAMN02350492 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02586000 | MDR-TB | lineage4.4.1.1 | za | SAMN02586004 | MDR-TB | lineage4.4.1.1 | za | SRR28394282 | MDR-TB | lineage4.3.3 | None | SRR29231669 | MDR-TB | lineage4.3.4.1 | None | ERR4796577 | HR-TB | None | ERR13290654 | MDR-TB | lineage2.2.1 | None | SRR7496513 | MDR-TB | lineage1.2.1.2.1 | us | SRR1167324 | MDR-TB | lineage4.4.1.1 | None | SRR1172353 | MDR-TB | lineage4.4.1.1 | None | SRR28119722 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02403494 | MDR-TB | lineage4.4.1.1 | za | SAMN02403495 | MDR-TB | lineage4.4.1.1 | za | ERR9907670 | MDR-TB | lineage4.3.4.1 | None | SRR833014 | MDR-TB | lineage4.4.1.1 | None | SRR1173782 | MDR-TB | lineage4.4.1.1 | None | SRR9971251 | MDR-TB | lineage4.4.1.1 | None | ERR4800668 | MDR-TB | lineage1.1.2 | None | SRR28393444 | MDR-TB | lineage4.3.3 | None | ERR9992983 | XDR-TB | lineage4.4.1.1 | None | ERR9907682 | MDR-TB | lineage4.3.4.1 | None | SRR10315532 | MDR-TB | lineage4.4.1.1 | None | SRR21276944 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR552611_ERR552610 | MDR-TB | lineage4.3.3 | None | ERR13290655 | MDR-TB | lineage2.2.1 | None | ERR1654697 | MDR-TB | lineage4.6.1.2 | None | SRR28393321 | MDR-TB | lineage4.3.3 | None | ERR4798658 | Pre-XDR-TB | lineage2.2.1 | in | SRR21887740 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286090 | MDR-TB | lineage2.2.1 | None | ERR7737738 | MDR-TB | lineage4.4.1.1 | None | ERR13288788 | XDR-TB | lineage4.4.1.1 | None | ERR9992837 | XDR-TB | lineage4.4.1.1 | None | SRR27450293 | HR-TB | lineage1.1.1.1 | None | ERR4831261 | MDR-TB | lineage1.1.2 | de | ERR4831753 | HR-TB | lineage4.1.2.1 | vn | ERR4813392 | MDR-TB | lineage4.3.3 | pe | ERR7737920 | MDR-TB | lineage4.4.1.1 | None | ERR7737802 | MDR-TB | lineage4.4.1.1 | None | SRR1169314 | MDR-TB | lineage4.4.1.1 | None | ERR11488717 | MDR-TB | lineage4.4.1.1 | None | ERR9907752 | MDR-TB | lineage4.3.4.1 | None | SRR28393806 | MDR-TB | lineage4.3.3 | None | ERR552611 | MDR-TB | lineage4.3.3 | None | ERR9907740 | MDR-TB | lineage4.3.4.1 | None | ERR3256135 | MDR-TB | lineage1.2.1.2 | ph | SRR9971365 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971316 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR21887650 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050560 | HR-TB | lineage4.1.2 | None | SRR28393252 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None | ERR7363053 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR998760 | MDR-TB | lineage4.1.2 | None | ERR7737788 | MDR-TB | lineage4.4.1.1 | None | SRR833018 | MDR-TB | lineage4.4.1.1 | None | SAMN01925652 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29231751 | MDR-TB | lineage4.3.4.1 | None | SRR9971191 | MDR-TB | lineage4.4.1.1 | None | ERR7737900 | MDR-TB | lineage2.2.1 | None | ERR2984783 | MDR-TB | lineage4.3.4.1 | None | ERR13288783 | MDR-TB | lineage2.2.1 | None | SRR1162959 | MDR-TB | lineage2.2.1 | None | SRR13870378 | Pre-XDR-TB | lineage4.3.3 | None | SRR28394051 | MDR-TB | lineage4.3.3 | None | SRR28409724 | MDR-TB | lineage2.2.1 | None | ERR10748259 | MDR-TB | lineage4.4.1.1 | None | ERR4798212 | Pre-XDR-TB | lineage2.2.1 | in | ERR4024889 | MDR-TB | lineage4.3.3 | None | ERR13289309 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR3105750 | MDR-TB | lineage1.2.2.2 | None | ERR13286150 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992789 | XDR-TB | lineage4.4.1.1 | None | SRR9971199 | MDR-TB | lineage4.4.1.1 | None | SRR1019153 | MDR-TB | lineage4.4.1.1 | None | ERR270667 | HR-TB | lineage1.1.2 | None | ERR8975509 | XDR-TB | lineage4.4.1.1 | None | ERR4813966 | MDR-TB | lineage4.3.4.1 | br | SRR9971366 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR7911349 | Pre-XDR-TB | lineage4.3.3 | None | SRR11972428 | Pre-XDR-TB | lineage2.2.1 | None | SRR14520113 | HR-TB | lineage1.1.1 | None | ERR7737666 | MDR-TB | lineage4.4.1.1 | None | SRR28393448 | MDR-TB | lineage4.1.2.1 | None | SRR21727758 | HR-TB | lineage1.2.1.2 | None | SRR21689849 | HR-TB | lineage1.2.1.2.1 | None | ERR12118005 | MDR-TB | lineage4.3.3 | None | SRR21747038 | MDR-TB | lineage1.1.3.1 | None | ERR1035341 | MDR-TB | lineage4.3.4.1 | br | ERR1352352 | XDR-TB | lineage2.2.1 | cn | ERR11488816 | MDR-TB | lineage2.2.1 | None | SRR1165266 | MDR-TB | lineage4.4.1.1 | None | SRR1167304 | MDR-TB | lineage4.4.1.1 | None | SRR5073947 | HR-TB | lineage1.1.1.1;lineage4.5 | vn | SRR5073788 | HR-TB | lineage4.1.2.1 | vn | SRR1169148 | MDR-TB | lineage4.4.1.1 | None | SRR5074141 | HR-TB | lineage4.1.2 | vn | ERR4813832 | Pre-XDR-TB | lineage4.8 | None | SRR27069458 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830004 | MDR-TB | lineage4.6.2.2 | None | ERR13289266 | MDR-TB | lineage4.4.1.1 | None | SRR25206980 | MDR-TB | lineage2.2.1 | None | SRR1173353 | MDR-TB | lineage4.4.1.1 | None | ERR13288782 | MDR-TB | lineage2.2.1 | None | ERR13289310 | MDR-TB | lineage4.4.1.1 | None | SRR28393629 | MDR-TB | lineage4.3.3 | None | ERR9993129 | XDR-TB | lineage4.4.1.1 | None | ERR9992643 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9907792 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR9992632 | XDR-TB | lineage4.4.1.1 | None | ERR11488976 | MDR-TB | lineage4.4.1.1 | None | SRR21887722 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488919 | MDR-TB | lineage4.4.1.1 | None | SRR1165668 | MDR-TB | lineage4.4.1.1 | None | ERR4813870 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR3287789 | MDR-TB | lineage4.3.3 | pe | ERR4831763 | HR-TB | lineage2.2;lineage4.5 | None | ERR4831627 | MDR-TB | lineage4.5 | vn | ERR4813451 | MDR-TB | lineage4.3.3 | pe | SRR1165653 | MDR-TB | lineage4.4.1.1 | None | ERR13258707 | MDR-TB | lineage1.1.3.1 | None | ERR13259986 | MDR-TB | lineage1.2.1.2.1 | None | ERR3256164 | MDR-TB | lineage1.2.1.2.1 | ph | ERR3256171 | HR-TB | lineage1.2.1.2.1 | ph | SRR26112621 | HR-TB | lineage1.2.1.2.1 | None | SRR832997 | MDR-TB | lineage4.4.1.1 | None | ERR9029377 | MDR-TB | lineage4.4.1.1 | None | SRR1167342 | MDR-TB | lineage4.4.1.1 | None | ERR9806836 | MDR-TB | lineage4.4.1.1 | None | ERR11043907 | MDR-TB | lineage4.1.2 | None | SRR21690876 | MDR-TB | lineage2.2.1 | None | SRR1169150 | MDR-TB | lineage4.4.1.1 | None | SRR15014724 | HR-TB | lineage1.1.2 | None | SRR12062528 | Pre-XDR-TB | lineage4.4.2 | None | ERR7902750 | MDR-TB | lineage1.1.2 | None |
|---|
