Rv1644 - c.24G>A
Drug resistance types
245 Sensitive
9 RR-TB
13 HR-TB
45 MDR-TB
3 Pre-XDR-TB
3 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 324 |
| La1.8.1 | 5 |
| lineage4.1.1.1;lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2;lineage4.1.1.1 | 1 |
| 2 | |
| lineage1.2.2.2;lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 338 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29053163 | Sensitive | lineage4.1.1.1 | None | SRR11342652 | MDR-TB | lineage4.1.1.1 | None | SAMN02585905 | Sensitive | lineage4.1.1.1 | za | ERR2515865 | Sensitive | lineage4.1.1.1 | za | ERR11465773 | Sensitive | lineage4.1.1.1 | None | SRR19226959 | Sensitive | lineage4.1.1.1 | None | SRR2101227 | Sensitive | lineage4.1.1.1 | None | ERR4816789 | Sensitive | lineage4.1.1.1 | None | SRR6650263 | Sensitive | lineage4.1.1.1 | None | SRR6982215 | Sensitive | lineage4.1.1.1 | None | SRR1183119 | Sensitive | lineage4.1.1.1 | None | SRR7069048 | Sensitive | lineage4.1.1.1 | None | SRR4034767 | Sensitive | lineage4.1.1.1 | za | SRR6797779 | Sensitive | lineage4.1.1.1 | None | SRR4034776 | Sensitive | lineage4.1.1.1 | za | SRR1180167 | Sensitive | lineage4.1.1.1 | None | SRR6045455 | Sensitive | lineage4.1.1.1 | gb | ERR4816593 | Other | lineage4.1.1.1 | None | SRR18213871 | Sensitive | lineage4.1.1.1 | None | SRR6982301 | Sensitive | lineage4.1.1.1 | None | SRR6856025 | Sensitive | lineage4.1.1.1 | None | SRR20969556 | HR-TB | lineage4.1.1.1 | None | SRR7240200 | Other | La1.8.1 | None | SRR28045424 | HR-TB | lineage4.1.1.1 | None | ERR9117688 | Sensitive | lineage4.1.1.1 | None | ERR4800283 | Sensitive | lineage4.1.1.1 | in | SRR28389876 | Sensitive | lineage4.1.1.1 | None | SRR6650123 | Sensitive | lineage4.1.1.1 | None | ERR8975990 | Sensitive | lineage4.1.1.1 | None | ERR2512805 | Sensitive | lineage4.1.1.1;lineage4.1.2.1 | gb | SRR4034792 | Sensitive | lineage4.1.1.1 | za | ERR9117821 | Sensitive | lineage4.1.1.1 | None | SRR4034777 | Sensitive | lineage4.1.1.1 | za | ERR11050863 | HR-TB | lineage4.1.1.1 | None | ERR4828952 | MDR-TB | lineage4.1.1.1 | None | SRR6982353 | Sensitive | lineage4.1.1.1 | None | SRR1165557 | MDR-TB | lineage4.1.1.1 | None | ERR072017 | MDR-TB | lineage4.1.1.1 | None | ERR039329 | Sensitive | lineage4.1.1.1 | gb | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR24222967 | Sensitive | lineage4.1.1.1 | None | ERR8975152 | Sensitive | lineage4.1.1.1 | None | ERR2515820 | Sensitive | lineage4.1.1.1 | za | ERR4818654 | Sensitive | lineage4.1.1.1 | gb | SRR13355782 | MDR-TB | lineage4.1.1.1 | None | SRR7782651 | MDR-TB | lineage4.1.1.1 | None | SRR19314676 | Sensitive | lineage4.1.1.1 | None | ERR4816268 | Sensitive | lineage4.1.1.1 | gb | SRR2100864 | Sensitive | lineage4.1.1.1 | None | ERR2513300 | Sensitive | lineage4.1.1.1 | gb | SRR11972445 | MDR-TB | lineage4.1.1.1 | None | SRR4034784 | Sensitive | lineage4.1.1.1 | za | SRR4034805 | Sensitive | lineage4.1.1.1 | za | SRR29096585 | RR-TB | lineage4.1.1.1 | None | ERR13290219 | Sensitive | lineage4.1.1.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR1791954 | Other | La1.8.1 | None | ERR9125906 | HR-TB | lineage4.1.1.1 | None | SRR16115862 | Other | lineage4.1.1.1 | None | ERR3273094 | MDR-TB | lineage4.1.1.1 | None | SRR11348160 | Sensitive | lineage4.1.1.1 | None | SRR4034780 | Sensitive | lineage4.1.1.1 | za | SRR29772742 | HR-TB | lineage4.1.1.1 | None | SRR4034771 | Sensitive | lineage4.1.1.1 | za | ERR8699147 | Sensitive | lineage4.1.1.1 | None | ERR2515630 | Sensitive | lineage4.1.1.1 | None | SRR1162886 | MDR-TB | lineage4.1.1.1 | None | ERR046738 | Sensitive | lineage4.1.1.1 | gb | SRR4034797 | Sensitive | lineage4.1.1.1 | za | ERR046735 | Sensitive | lineage4.1.1.1 | gb | ERR046971 | Sensitive | lineage4.1.1.1 | gb | ERR10748171 | MDR-TB | lineage4.1.1.1 | None | SRR4034773 | Sensitive | lineage4.1.1.1 | za | SRR2101674 | Sensitive | lineage4.1.1.1 | None | ERR4820236 | Sensitive | lineage4.1.1.1 | gb | SRR5818583 | MDR-TB | lineage4.1.1.1 | dj | SRR26800477 | Sensitive | lineage4.1.1.1 | None | SRR4034781 | Sensitive | lineage4.1.1.1 | za | SRR4034782 | Sensitive | lineage4.1.1.1 | za | SRR7070033 | Sensitive | lineage4.1.1.1 | None | SRR21675937 | Sensitive | lineage4.1.1.1 | None | ERR2513722 | Sensitive | lineage4.1.1.1 | gb | SRR6650291 | Sensitive | lineage4.1.1.1 | None | ERR046986 | MDR-TB | lineage4.1.1.1 | gb | ERR11465305 | Sensitive | lineage4.1.1.1 | None | SRR22249844 | Sensitive | lineage4.1.1.1 | None | ERR046842 | Sensitive | lineage4.1.1.1 | gb | SRR4034783 | Sensitive | lineage4.1.1.1 | za | SRR28389907 | Sensitive | lineage4.1.1.1 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR2514855 | Sensitive | lineage4.1.1.1 | gb | ERR13260715 | Sensitive | lineage4.1.1.1 | None | ERR13289684 | Sensitive | lineage4.1.1.1 | None | SRR2100070 | Sensitive | lineage4.1.1.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR2514378 | Sensitive | lineage4.1.1.1 | gb | SRR6045243 | Sensitive | lineage4.1.1.1 | gb | ERR4798848 | Sensitive | lineage4.1.1.1 | in | ERR11466028 | Sensitive | lineage4.1.1.1 | None | SRR28389898 | Sensitive | lineage4.1.1.1 | None | ERR040109 | Sensitive | lineage4.1.1.1 | gb | SRR28409385 | Sensitive | lineage4.1.1.1 | None | ERR4553913 | MDR-TB | lineage4.1.1.1 | None | ERR8975634 | HR-TB | lineage4.1.1.1 | None | ERR9992869 | XDR-TB | lineage4.1.1.1 | None | ERR1034961 | Sensitive | lineage4.1.1.1 | za | SRR11349202 | MDR-TB | lineage4.1.1.1 | None | ERR4553996 | MDR-TB | lineage4.1.1.1 | None | SRR4034802 | Sensitive | lineage4.1.1.1 | za | SRR2469378 | MDR-TB | lineage4.1.1.1 | None | ERR8975154 | RR-TB | lineage4.1.1.1 | None | ERR2510795 | Sensitive | lineage4.3.4.1 | it | ERR11081805 | Sensitive | lineage4.1.1.1 | None | ERR11465063 | Sensitive | lineage4.1.1.1 | None | ERR046736 | Sensitive | lineage4.1.1.1 | gb | SRR1181301 | Sensitive | lineage4.1.1.1 | None | SRR4034786 | Sensitive | lineage4.1.1.1 | za | SRR4034788 | Sensitive | lineage4.1.1.1 | za | SRR4034804 | Sensitive | lineage4.1.1.1 | za | SRR6896418 | Sensitive | lineage4.1.1.1 | None | ERR046744 | Sensitive | lineage4.1.1.1 | gb | SRR6650171 | Sensitive | lineage1.1.3.1 | None | ERR046819 | Sensitive | lineage4.1.1.1 | gb | ERR9807025 | Sensitive | lineage4.1.1.1 | None | ERR4817786 | Sensitive | lineage4.1.1.1 | None | ERR11044017 | MDR-TB | lineage4.1.1.1 | None | ERR2513059 | Sensitive | lineage4.1.1.1 | gb | ERR2515900 | Sensitive | lineage4.1.1.1 | za | SRR22250041 | Sensitive | lineage4.1.1.1 | None | SRR2100332 | HR-TB | lineage4.1.1.1 | None | ERR11081572 | MDR-TB | lineage4.1.1.1 | None | SRR5818579 | MDR-TB | lineage4.1.1.1 | dj | SRR21661631 | Sensitive | lineage4.1.1.1 | None | ERR4821999 | Sensitive | lineage4.1.1.1 | gb | ERR13285383 | Sensitive | lineage4.1.1.1 | None | ERR4816711 | Sensitive | lineage4.1.1.1 | gb | SRR2101318 | Sensitive | lineage4.1.1.1 | None | ERR3470566 | Sensitive | lineage4.1.1.1 | None | SRR4034807 | Sensitive | lineage4.1.1.1 | za | ERR4553955 | MDR-TB | lineage4.1.1.1 | None | SRR28389838 | Sensitive | lineage4.1.1.1 | None | ERR046745 | Sensitive | lineage4.1.1.1 | gb | ERR2515788 | Sensitive | lineage4.1.1.1 | None | ERR046743 | Sensitive | lineage4.1.1.1 | gb | ERR2513311 | Sensitive | lineage4.1.1.1 | gb | SRR16370644 | Sensitive | lineage4.1.1.1 | None | ERR2513236 | Sensitive | lineage4.1.1.1 | gb | ERR4796358 | Other | lineage3.1.2;lineage4.1.1.1 | None | ERR046825 | RR-TB | lineage4.1.1.1 | gb | ERR2515783 | Sensitive | lineage4.1.1.1 | za | ERR13289737 | Sensitive | lineage4.1.1.1 | None | SRR6856039 | Sensitive | lineage4.1.1.1 | None | SRR29342490 | Sensitive | lineage4.1.1.1 | None | ERR4553971 | MDR-TB | None | ERR7911456 | Sensitive | lineage4.1.1.1 | za | ERR8975984 | Sensitive | lineage4.1.1.1 | None | ERR4816540 | Sensitive | lineage4.1.1.1 | gb | SRR7240202 | Other | La1.8.1 | None | SRR4034808 | Sensitive | lineage4.1.1.1 | za | SRR16103893 | Sensitive | lineage4.1.1.1 | None | SRR28859905 | Sensitive | lineage4.1.1.1 | None | SRR29053237 | Sensitive | lineage4.1.1.1 | None | ERR13260766 | Sensitive | lineage4.1.1.1 | None | ERR039328 | Sensitive | lineage4.1.1.1 | gb | ERR046733 | Sensitive | lineage4.1.1.1 | gb | ERR11465165 | Sensitive | lineage4.1.1.1 | None | ERR046943 | RR-TB | lineage4.1.1.1 | gb | ERR4818947 | Sensitive | lineage4.1.1.1 | None | ERR3470683 | Other | lineage4.1.1.1 | None | SRR6896367 | Sensitive | lineage4.1.1.1 | None | SRR4034775 | Sensitive | lineage4.1.1.1 | za | SRR11348149 | Sensitive | lineage4.1.1.1 | None | ERR8686560 | Sensitive | lineage4.1.1.1 | None | ERR4817920 | Sensitive | lineage4.1.1.1 | gb | SRR6045749 | Other | lineage4.1.1.1 | gb | SRR2101042 | Sensitive | lineage4.1.1.1 | None | ERR11465693 | Sensitive | lineage4.1.1.1 | None | ERR7737660 | Sensitive | lineage4.1.1.1 | None | SRR4034766 | Sensitive | lineage4.1.1.1 | za | ERR11774846 | Sensitive | lineage4.1.1.1 | None | ERR9992765 | XDR-TB | lineage4.1.1.1 | None | ERR13290523 | MDR-TB | lineage4.1.1.1 | None | ERR13290525 | MDR-TB | lineage4.1.1.1 | None | SRR30182379 | Sensitive | lineage4.1.1.1 | None | SRR30182399 | Other | lineage4.1.1.1 | None | SRR30182722 | Sensitive | lineage4.1.1.1 | None | ERR039327 | Sensitive | lineage4.1.1.1 | gb | ERR1035021 | RR-TB | lineage4.1.1.1 | za | ERR228118 | Sensitive | lineage4.1.1.1 | None | ERR2514532 | Sensitive | lineage4.1.1.1 | gb | SRR28389904 | Sensitive | lineage4.1.1.1 | None | ERR046840 | Sensitive | lineage4.1.1.1 | gb | ERR983250 | RR-TB | lineage4.1.1.1 | None | SRR2101795 | Sensitive | lineage4.1.1.1 | None | SRR4034791 | Sensitive | lineage4.1.1.1 | za | ERR4796809 | Sensitive | lineage4.1.1.1 | in | ERR11044028 | MDR-TB | lineage4.1.1.1 | None | ERR11049799 | Sensitive | lineage4.1.1.1 | None | ERR4818179 | Other | lineage4.1.1.1 | None | ERR4553978 | MDR-TB | None | ERR4821839 | Sensitive | lineage4.1.1.1 | gb | ERR2513947 | Sensitive | lineage4.1.1.1 | gb | ERR270762 | Sensitive | lineage4.1.1.1 | None | SRR29094010 | RR-TB | lineage4.1.1.1 | None | SRR29217210 | Sensitive | lineage4.1.1.1 | None | ERR351889 | Sensitive | lineage4.1.1.1 | None | ERR046841 | Sensitive | lineage4.1.1.1 | gb | SRR7069834 | Sensitive | lineage4.1.1.1 | None | ERR4276862 | MDR-TB | lineage4.1.1.1 | None | SRR7240533 | Other | La1.8.1 | None | SRR29017008 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR046740 | Sensitive | lineage4.1.1.1 | None | SRR4034785 | Sensitive | lineage4.1.1.1 | za | SRR4034794 | Sensitive | lineage4.1.1.1 | za | ERR7911763 | Sensitive | lineage4.1.1.1 | za | ERR2515914 | Sensitive | lineage4.1.1.1 | za | SRR27332323 | Sensitive | lineage4.1.1.1 | None | SRR29017626 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR7911754 | Sensitive | lineage4.1.1.1 | za | ERR4816635 | Other | lineage4.1.1.1 | gb | SRR1181316 | Sensitive | lineage4.1.1.1 | None | ERR718453 | Sensitive | lineage4.1.1.1 | th | ERR11465594 | Sensitive | lineage4.1.1.1 | None | SRR12634606 | Other | lineage4.1.1.1 | None | SRR4034803 | Sensitive | lineage4.1.1.1 | za | ERR1035053 | MDR-TB | lineage4.1.1.1 | za | SRR6046256 | Sensitive | lineage4.1.1.1 | gb | SRR7069895 | Sensitive | lineage4.1.1.1 | None | SRR6797587 | Sensitive | lineage4.1.1.1 | None | SRR29056238 | Sensitive | lineage4.1.1.1 | None | ERR4553984 | MDR-TB | lineage4.1.1.1 | None | ERR8975470 | Sensitive | lineage4.1.1.1 | None | ERR4828854 | MDR-TB | lineage4.1.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR6046434 | Sensitive | lineage4.1.1.1 | None | SRR16157100 | Sensitive | lineage4.1.1.1 | None | ERR4817245 | Sensitive | lineage4.1.1.1 | gb | SRR21736383 | Sensitive | lineage4.1.1.1 | None | ERR2515211 | Other | lineage4.1.1.1 | za | SRR6797794 | Sensitive | lineage4.1.1.1 | None | SRR7070065 | Other | lineage4.1.1.1 | None | SRR16370699 | Sensitive | lineage4.1.1.1 | None | ERR4799531 | Sensitive | lineage4.1.1.1 | None | SRR4034787 | Sensitive | lineage4.1.1.1 | za | ERR386821 | Sensitive | lineage4.1.1.1 | None | ERR551386 | Sensitive | lineage4.1.1.1 | cg | ERR046746 | Sensitive | lineage4.1.1.1 | gb | SRR27450383 | Sensitive | lineage4.1.1.1 | None | SRR7131235 | Sensitive | lineage4.3.4.1 | None | SRR6896568 | Sensitive | lineage4.1.1.1 | None | ERR046737 | Sensitive | lineage4.1.1.1 | gb | ERR4796391 | Other | lineage4.1.1.1 | in | SRR4034772 | Sensitive | lineage4.1.1.1 | za | ERR2513817 | Sensitive | lineage4.1.1.1 | gb | SRR6982491 | Sensitive | lineage4.1.1.1 | None | SRR6797780 | Sensitive | lineage4.1.1.1 | None | ERR9117725 | Other | lineage4.1.1.1 | None | ERR046964 | Sensitive | lineage4.1.1.1 | gb | SRR6855863 | Sensitive | lineage4.1.1.1 | None | SRR4034765 | Sensitive | lineage4.1.1.1 | za | ERR11465062 | Sensitive | lineage4.1.1.1 | None | ERR046960 | Sensitive | lineage4.1.1.1 | gb | SRR7069830 | Sensitive | lineage4.1.1.1 | None | SRR18912549 | Other | lineage4.1.1.1 | None | SRR4034806 | Sensitive | lineage4.1.1.1 | za | SRR21690310 | Sensitive | lineage4.1.1.1 | None | SRR4034789 | Sensitive | lineage4.1.1.1 | za | SAMN02414939 | MDR-TB | lineage4.1.1.1 | se | ERR4276904 | MDR-TB | lineage4.1.1.1 | None | ERR046924 | Sensitive | lineage4.1.1.1 | gb | ERR11775530 | Sensitive | lineage4.1.1.1 | None | SRR2100481 | Sensitive | lineage4.1.1.1 | None | ERR046923 | Sensitive | lineage4.1.1.1 | gb | SRR1165525 | MDR-TB | lineage4.1.1.1 | None | SRR27332305 | HR-TB | lineage4.1.1.1 | None | ERR294252 | Sensitive | lineage4.1.1.1 | None | ERR2515950 | MDR-TB | lineage4.1.1.1 | za | ERR4799615 | Sensitive | lineage4.1.1.1 | in | ERR2514415 | Sensitive | lineage4.1.1.1 | gb | SRR28357663 | Sensitive | lineage4.1.1.1 | None | SRR29055714 | Sensitive | lineage4.1.1.1 | None | SRR6797628 | Sensitive | lineage4.1.1.1 | None | ERR11465943 | Sensitive | lineage4.1.1.1 | None | SRR6797541 | Sensitive | lineage1.2.2.2;lineage4.1.1.1 | None | SRR21732288 | Sensitive | lineage4.1.1.1 | None | ERR046734 | Sensitive | lineage4.1.1.1 | gb | SRR10868987 | Sensitive | lineage4.1.1.1 | None | SRR16058245 | HR-TB | lineage4.1.1.1 | None | ERR4817026 | Sensitive | lineage4.1.1.1 | gb | ERR551387 | Sensitive | lineage4.1.1.1 | cg | ERR2515497 | Sensitive | lineage4.1.1.1 | za | ERR046950 | Sensitive | lineage4.1.1.1 | gb | ERR13292075 | Sensitive | lineage4.1.1.1 | None | ERR4821191 | Sensitive | lineage4.1.1.1 | gb | ERR970446 | RR-TB | lineage4.1.1.1 | None | SRR4034793 | Sensitive | lineage4.1.1.1 | za | SRR4034799 | Sensitive | lineage4.1.1.1 | za | SRR28409424 | Sensitive | lineage4.1.1.1 | None | SRR28859979 | Sensitive | lineage4.1.1.1 | None | ERR11775592 | Sensitive | lineage4.1.1.1 | None | SRR6855852 | Sensitive | lineage4.1.1.1 | None | ERR11050889 | HR-TB | lineage4.1.1.1 | None | SRR29056289 | Sensitive | lineage4.1.1.1 | None | SRR30296333 | MDR-TB | lineage4.1.1.1 | None | ERR4820884 | Other | lineage4.1.1.1 | gb | ERR8699815 | Sensitive | lineage4.1.1.1 | None | SRR1791760 | Other | La1.8.1 | None | SRR6896562 | Sensitive | lineage4.1.1.1 | None | SRR22249571 | Sensitive | lineage4.1.1.1 | None | ERR13093885 | Sensitive | lineage4.1.1.1 | None | SRR21239915 | Sensitive | lineage4.1.1.1 | None | SRR6981987 | Sensitive | lineage4.1.1.1 | None | SRR29093313 | Sensitive | lineage4.1.1.1 | None | ERR4822308 | MDR-TB | lineage4.1.1.1 | de | SRR1166926 | MDR-TB | lineage4.1.1.1 | None | ERR7911453 | Sensitive | lineage4.1.1.1 | za | SRR6046098 | Sensitive | lineage4.1.1.1 | gb | ERR2516571 | MDR-TB | lineage4.1.1.1 | nl | SRR6325449 | Sensitive | lineage4.1.1.1 | us | SRR6797625 | Sensitive | lineage4.1.1.1 | None | SRR4034774 | Sensitive | lineage4.1.1.1 | za | ERR2516028 | Sensitive | lineage4.1.1.1 | None | ERR2516689 | MDR-TB | lineage4.1.1.1 | nl | SRR2100460 | Sensitive | lineage4.1.1.1 | None | SRR4034778 | Sensitive | lineage4.1.1.1 | za | SRR4034798 | Sensitive | lineage4.1.1.1 | za | ERR4822315 | MDR-TB | lineage4.1.1.1 | de | ERR2513712 | Sensitive | lineage4.1.1.1 | gb | ERR2514268 | Sensitive | lineage4.1.1.1 | gb | ERR2514367 | Sensitive | lineage4.1.1.1 | gb | SRR29017465 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR13289712 | Sensitive | lineage4.1.1.1 | None | ERR114484 | HR-TB | lineage4.1.1.1 | None | ERR970459 | RR-TB | lineage4.1.1.1 | None | SRR22424940 | HR-TB | lineage4.1.1.1 | None | ERR10748172 | MDR-TB | lineage4.1.1.1 | None | ERR10465735 | MDR-TB | lineage4.1.1.1 | None | ERR9993255 | XDR-TB | lineage4.1.1.1 | None |
|---|
