lineage | Count |
---|---|
74 | |
lineage4.1.2 | 1 |
lineage4.1.2.1 | 7 |
lineage3.1 | 2 |
lineage4.3.4.2.1 | 2 |
lineage4 | 4 |
La1.8.1 | 1 |
La1 | 1 |
lineage4.9 | 2 |
lineage2.2.2 | 2 |
lineage4.3.2 | 1 |
lineage2.2.1 | 4 |
La3 | 1 |
lineage2.2.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2 | 1 |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 108 |
ID | Drug resistance | Lineage | Country iso2 | ERR1035162 | Other | None | SRR5341418 | Other | None | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045952 | HR-TB | None | SRR6046133 | HR-TB | None | ERR5311090 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | ERR5917755 | Sensitive | lineage4.1.2 | by | ERR323036 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323055 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR3283032 | HR-TB | None | ERR133986 | HR-TB | None | ERR1034652 | Other | None | ERR133825 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR3797083 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3468644 | HR-TB | La1.8.1 | None | ERR3797014 | Other | None | ERR3797061 | Other | None | ERR3439432 | Other | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4188350 | HR-TB | None | ERR4798406 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736839 | Other | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR8976043 | HR-TB | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1169306 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR13861434 | RR-TB | lineage4.9 | None | ERR1035239 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675558 | HR-TB | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR176643 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None |
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