lineage | Count |
---|---|
lineage4.4.1.1 | 21 |
lineage4.3.2.1 | 27 |
lineage4.9.1 | 7 |
lineage4.3.4.1 | 26 |
lineage4.7 | 2 |
lineage4.8 | 43 |
lineage1.1.2 | 4 |
lineage1.2.2.2 | 5 |
lineage4.1.2.1 | 21 |
lineage4.3.3 | 10 |
lineage4.3.4.2.1 | 49 |
lineage4.6.5 | 2 |
lineage4.8.1 | 8 |
lineage3 | 8 |
lineage2.2.1 | 12 |
lineage4.1.1.3 | 7 |
lineage4.9 | 2 |
lineage1.2.2.1 | 6 |
lineage1.1.3.2 | 2 |
lineage4.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.2.2.2 | 2 |
lineage1.1.3.1 | 1 |
lineage1.1.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4.4.1.2 | 1 |
lineage4.4.1.1;lineage4.9.1 | 1 |
lineage4.1.1.2 | 1 |
lineage4.1.1.1 | 2 |
lineage4.3.2 | 2 |
lineage4.6 | 1 |
lineage3.1.1 | 1 |
lineage4.2.1.1 | 1 |
2 | |
lineage4.5 | 2 |
lineage1.2.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 287 |
ID | Drug resistance | Lineage | Country iso2 | ERR11466465 | Sensitive | lineage4.4.1.1 | None | ERR11466484 | Sensitive | lineage4.4.1.1 | None | ERR11465677 | Sensitive | lineage4.3.2.1 | None | ERR11465322 | Sensitive | lineage4.9.1 | None | ERR11465733 | Sensitive | lineage4.4.1.1 | None | ERR11465259 | Sensitive | lineage4.3.4.1 | None | ERR11466462 | Sensitive | lineage4.7 | None | ERR2229625 | Sensitive | lineage4.8 | dk | ERR11465858 | Sensitive | lineage4.3.2.1 | None | ERR11465357 | Sensitive | lineage4.3.2.1 | None | ERR11465630 | Sensitive | lineage4.3.2.1 | None | ERR11465407 | Sensitive | lineage4.4.1.1 | None | ERR2229151 | Other | lineage4.8 | dk | ERR11465532 | RR-TB | lineage1.1.2 | None | ERR11465737 | Sensitive | lineage4.4.1.1 | None | ERR11465559 | Sensitive | lineage4.3.4.1 | None | ERR11466223 | HR-TB | lineage1.2.2.2 | None | ERR11466247 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR2229155 | Sensitive | lineage4.8 | None | ERR11465780 | Sensitive | lineage4.1.2.1 | None | ERR11465546 | RR-TB | lineage1.1.2 | None | ERR11466469 | Sensitive | lineage4.3.2.1 | None | ERR11465872 | Sensitive | lineage4.3.3 | None | ERR11465919 | Sensitive | lineage4.3.4.2.1 | None | ERR11081688 | MDR-TB | lineage4.6.5 | None | ERR11465016 | Sensitive | lineage4.3.4.2.1 | None | ERR11465286 | Sensitive | lineage4.3.2.1 | None | ERR2229729 | Sensitive | lineage4.8 | None | ERR11465239 | Sensitive | lineage4.8.1 | None | SRR7070467 | Sensitive | lineage3 | None | ERR2229117 | Sensitive | lineage4.8 | dk | ERR11466565 | Sensitive | lineage4.3.4.2.1 | None | SRR24466761 | Sensitive | lineage4.1.2.1 | None | ERR11465782 | Other | lineage4.4.1.1 | None | ERR9117778 | HR-TB | lineage3 | None | ERR11466436 | Sensitive | lineage4.3.4.1 | None | ERR11465790 | Sensitive | lineage4.3.4.2.1 | None | ERR11465369 | Sensitive | lineage4.3.4.2.1 | None | SRR24466781 | Sensitive | lineage4.8 | None | ERR11465616 | Sensitive | lineage4.8 | None | ERR11465053 | Sensitive | lineage4.3.4.2.1 | None | ERR2229432 | Sensitive | lineage4.8 | dk | ERR11465203 | MDR-TB | lineage4.3.4.2.1 | None | ERR11465220 | RR-TB | lineage4.4.1.1 | None | ERR11465474 | Sensitive | lineage4.1.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR11083014 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465644 | Sensitive | lineage4.3.3 | None | ERR11465508 | Sensitive | lineage4.3.4.2.1 | None | ERR11465784 | Sensitive | lineage4.1.2.1 | None | ERR11465414 | Sensitive | lineage4.3.4.2.1 | None | ERR11465547 | Sensitive | lineage4.9.1 | None | ERR11465623 | Sensitive | lineage4.1.1.3 | None | SRR23862027 | MDR-TB | lineage4.8 | None | ERR11465584 | Sensitive | lineage4.1.2.1 | None | ERR11465431 | Sensitive | lineage4.3.2.1 | None | ERR11465814 | Sensitive | lineage4.3.2.1 | None | ERR11465900 | Sensitive | lineage4.3.4.2.1 | None | ERR11465811 | Sensitive | lineage4.1.2.1 | None | ERR11465648 | MDR-TB | lineage4.1.1.3 | None | SRR28646065 | Sensitive | lineage4.8 | None | SRR22461661 | MDR-TB | lineage4.3.3 | None | ERR11465854 | Sensitive | lineage4.3.4.2.1 | None | ERR11464996 | Sensitive | lineage4.9 | None | ERR11465820 | Sensitive | lineage4.3.4.2.1 | None | ERR11465421 | Sensitive | lineage4.1.1.3 | None | ERR11465293 | Sensitive | lineage4.1.2.1 | None | ERR11466495 | Sensitive | lineage4.1.2.1 | None | ERR2229297 | Sensitive | lineage4.8 | dk | ERR11465660 | Sensitive | lineage4.3.4.1 | None | ERR11465864 | Sensitive | lineage4.3.4.1 | None | ERR11466143 | Sensitive | lineage4.4.1.1 | None | ERR11465247 | Sensitive | lineage1.2.2.1 | None | ERR11465868 | Sensitive | lineage4.3.4.2.1 | None | ERR11466267 | Sensitive | lineage1.1.2 | None | ERR11465318 | Sensitive | lineage4.3.4.2.1 | None | ERR11465199 | Sensitive | lineage4.4.1.1 | None | ERR11465704 | Sensitive | lineage4.3.4.2.1 | None | ERR2229252 | Sensitive | lineage4.8 | dk | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR11465774 | Sensitive | lineage4.3.2.1 | None | ERR11465227 | Sensitive | lineage4.8 | None | ERR2229286 | Sensitive | lineage4.8 | dk | ERR11465176 | Sensitive | lineage4.3.4.1 | None | ERR11465861 | Sensitive | lineage4.8.1 | None | ERR11465551 | Sensitive | lineage4.3.2.1 | None | ERR2229387 | Sensitive | lineage4.8 | None | ERR11466464 | Sensitive | lineage1.1.3.2 | None | ERR11465779 | Sensitive | lineage4.4.1.1 | None | ERR11465057 | Sensitive | lineage4.1.1.3 | None | SRR16088468 | MDR-TB | lineage4.3.3 | None | ERR11465539 | Sensitive | lineage4.3.4.2.1 | None | SRR7069481 | HR-TB | lineage3 | None | ERR11465866 | Sensitive | lineage1.1.3.2 | None | ERR11465632 | Sensitive | lineage4.3.4.2.1 | None | ERR11465554 | Sensitive | lineage4.3.4.1 | None | ERR2229207 | Sensitive | lineage4.8 | dk | ERR11465216 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR11465592 | Sensitive | lineage4.3.2.1 | None | SRR1002693 | HR-TB | lineage4.3.3 | None | ERR11465032 | Sensitive | lineage4.3.4.2.1 | None | SRR18714906 | HR-TB | lineage4.2.1 | None | ERR11466141 | Sensitive | lineage4.3.4.2.1 | None | ERR11466323 | Sensitive | lineage4.6.1.1 | None | ERR4822304 | MDR-TB | lineage4.1.2.1 | de | ERR11466112 | Sensitive | lineage4.3.4.1 | None | ERR2229564 | Sensitive | lineage4.8 | dk | ERR2229521 | Sensitive | lineage4.8 | None | SRR22249658 | Sensitive | lineage2.2.1.1 | None | ERR2229262 | Sensitive | lineage4.8 | dk | ERR2229592 | Sensitive | lineage4.8 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR11465585 | Sensitive | lineage4.3.4.1 | None | ERR2229367 | Sensitive | lineage4.8 | dk | ERR11466499 | Other | lineage4.3.4.1 | None | ERR11465728 | Sensitive | lineage4.4.1.1 | None | SRR23861736 | Sensitive | lineage4.3.3 | None | ERR11465338 | Sensitive | lineage4.2.2.2 | None | ERR11466409 | Sensitive | lineage4.9.1 | None | SRR6257066 | HR-TB | lineage4.3.3 | None | ERR2229574 | Sensitive | lineage4.8 | None | ERR11465874 | Sensitive | lineage4.3.4.1 | None | ERR11466459 | Sensitive | lineage4.9.1 | None | ERR11466424 | HR-TB | lineage4.3.4.2.1 | None | ERR11465599 | Sensitive | lineage4.3.2.1 | None | ERR11466466 | Sensitive | lineage4.3.4.2.1 | None | ERR11465589 | Sensitive | lineage1.2.2.1 | None | ERR11465606 | Sensitive | lineage4.4.1.1 | None | ERR11466502 | MDR-TB | lineage4.1.2.1 | None | ERR11466136 | Sensitive | lineage4.8.1 | None | ERR11465659 | Sensitive | lineage4.8.1 | None | ERR11465749 | Sensitive | lineage4.3.2.1 | None | ERR11465741 | Sensitive | lineage4.3.4.2.1 | None | ERR2229222 | Sensitive | lineage4.8 | dk | ERR11464984 | Sensitive | lineage4.8 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR11465745 | Sensitive | lineage4.3.4.2.1 | None | SRR28646078 | MDR-TB | lineage4.1.2.1 | None | SRR29440689 | Sensitive | lineage4.2.2.2 | None | SRR29440937 | Sensitive | lineage1.1.3.1 | None | SRR29440977 | Sensitive | lineage4.4.1.1 | None | SRR29441044 | Sensitive | lineage1.1.1 | None | SRR29441091 | Sensitive | lineage4.6.2.2 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | ERR11043111 | MDR-TB | lineage4.6.5 | None | ERR11466489 | Sensitive | lineage4.3.4.1 | None | ERR11465848 | Sensitive | lineage4.4.1.1 | None | ERR11465657 | Sensitive | lineage4.4.1.2 | None | ERR11465568 | Sensitive | lineage1.2.2.1 | None | ERR11465321 | Sensitive | lineage4.8.1 | None | SRR14088365 | XDR-TB | lineage3 | None | ERR11466505 | Sensitive | lineage4.4.1.1;lineage4.9.1 | None | ERR11465536 | Sensitive | lineage4.3.4.2.1 | None | ERR11465560 | MDR-TB | lineage1.1.2 | None | SRR6484925 | MDR-TB | lineage2.2.1 | None | ERR2229467 | Sensitive | lineage4.8 | dk | ERR11466021 | Sensitive | lineage4.8.1 | None | ERR4814511 | Sensitive | lineage3 | gb | ERR11465875 | Sensitive | lineage4.1.1.2 | None | ERR11466511 | MDR-TB | lineage4.3.2.1 | None | ERR11465840 | Sensitive | lineage4.3.4.2.1 | None | ERR11465252 | Sensitive | lineage4.3.4.1 | None | ERR11465619 | Sensitive | lineage4.3.4.1 | None | ERR11465456 | MDR-TB | lineage4.1.1.1 | None | ERR11465706 | Sensitive | lineage1.2.2.2 | None | ERR4819991 | Sensitive | lineage3 | gb | ERR11465993 | Sensitive | lineage4.1.2.1 | None | ERR11466133 | Sensitive | lineage4.3.2.1 | None | ERR11465202 | MDR-TB | lineage4.3.4.2.1 | None | ERR2677390 | Pre-XDR-TB | lineage2.2.1 | de | ERR11465855 | Sensitive | lineage4.4.1.1 | None | ERR4815885 | Sensitive | lineage3 | gb | ERR11465787 | Sensitive | lineage4.4.1.1 | None | ERR11465756 | Sensitive | lineage4.3.3 | None | ERR11466587 | Sensitive | lineage2.2.1 | None | ERR11465857 | Sensitive | lineage4.3.3 | None | ERR11466082 | Sensitive | lineage4.3.4.2.1 | None | SRR24466785 | Sensitive | lineage4.8 | None | ERR11465614 | Sensitive | lineage4.4.1.1 | None | SRR24466789 | MDR-TB | lineage4.8 | None | ERR11465009 | Sensitive | lineage4.3.4.2.1 | None | ERR11466542 | Sensitive | lineage4.3.2 | None | ERR2229553 | Sensitive | lineage4.8 | None | ERR11465382 | Sensitive | lineage4.1.2.1 | None | ERR11466311 | MDR-TB | lineage4.3.4.2.1 | None | ERR11466521 | Sensitive | lineage4.1.2.1 | None | ERR11466160 | Sensitive | lineage4.4.1.1 | None | ERR11465803 | Sensitive | lineage2.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR11466473 | Sensitive | lineage4.3.4.1 | None | ERR11465304 | Sensitive | lineage4.3.3 | None | ERR4827932 | MDR-TB | lineage2.2.1 | None | ERR11464956 | Sensitive | lineage4.1.1.3 | None | ERR11465726 | Sensitive | lineage3.1.1 | None | ERR2229598 | Sensitive | lineage4.8 | dk | ERR2229393 | Sensitive | lineage4.8 | None | ERR2229685 | Sensitive | lineage4.8 | None | ERR11465981 | Sensitive | lineage4.3.4.1 | None | ERR11465007 | Sensitive | lineage4.3.4.2.1 | None | ERR11465830 | Sensitive | lineage4.9 | None | ERR11466435 | Sensitive | lineage4.3.4.1 | None | ERR11466431 | Sensitive | lineage4.7 | None | ERR11465609 | Sensitive | lineage4.1.2.1 | None | ERR11466430 | Sensitive | lineage2.2.1 | None | ERR11465671 | Sensitive | lineage4.3.4.2.1 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | ERR11465192 | Sensitive | lineage4.3.4.2.1 | None | ERR11465804 | Sensitive | lineage4.8 | None | ERR2229372 | Sensitive | lineage4.8 | dk | ERR2510682 | Pre-XDR-TB | lineage2.2.1 | it | ERR11464963 | Sensitive | lineage4.4.1.1 | None | ERR11465383 | HR-TB | lineage4.3.4.2.1 | None | ERR11465208 | Sensitive | lineage4.3.4.1 | None | ERR11465052 | Sensitive | lineage4.3.4.2.1 | None | ERR2229370 | RR-TB | lineage4.8 | None | ERR11465729 | Sensitive | lineage4.3.4.2.1 | None | ERR11465058 | Sensitive | lineage4.8 | None | ERR11466134 | Sensitive | lineage4.3.2.1 | None | ERR11465158 | Sensitive | lineage4.3.2.1 | None | SRR18715345 | Sensitive | lineage4.1.2.1 | None | ERR11465396 | Sensitive | lineage1.2.2.2 | None | ERR11466570 | Sensitive | lineage1.2.2.1 | None | ERR11465725 | Sensitive | lineage4.3.4.2.1 | None | ERR11465664 | Sensitive | lineage4.3.2.1 | None | ERR11465507 | Sensitive | lineage4.3.4.2.1 | None | ERR11466385 | Sensitive | lineage4.4.1.1 | None | ERR11466475 | Sensitive | lineage4.1.2.1 | None | ERR11465637 | Sensitive | lineage4.3.4.2.1 | None | ERR11465847 | Sensitive | lineage4.3.4.2.1 | None | ERR2229595 | Sensitive | lineage4.8 | dk | ERR11049797 | Sensitive | lineage4.8 | None | ERR11465738 | Sensitive | lineage4.3.2.1 | None | ERR11466139 | Sensitive | lineage4.1.2.1 | None | ERR11465899 | Sensitive | lineage4.3.4.2.1 | None | ERR11465620 | MDR-TB | lineage4.1.1.3 | None | ERR11465251 | Sensitive | lineage4.3.4.2.1 | None | ERR11465379 | Sensitive | lineage4.8.1 | None | ERR11465720 | Sensitive | lineage4.3.2.1 | None | ERR11465596 | Sensitive | lineage4.3.2 | None | SRR23862015 | Sensitive | lineage4.2.1.1 | None | ERR11465368 | Sensitive | lineage4.3.4.2.1 | None | ERR11466360 | Sensitive | lineage4.3.4.2.1 | None | ERR2229445 | Sensitive | lineage4.8 | None | ERR2659167 | Sensitive | None | ERR2659170 | Sensitive | None | SRR28646091 | Pre-XDR-TB | lineage2.2.1 | None | SRR29440881 | Sensitive | lineage4.5 | None | SRR29440891 | Sensitive | lineage1.2.1 | None | SRR29440935 | Other | lineage1.2.2.1 | None | SRR29441050 | HR-TB | lineage1.2.1.2.1 | None | SRR29441057 | HR-TB | lineage4.5 | None | SRR29441080 | Other | lineage3 | None | ERR11464953 | Sensitive | lineage4.1.1.3 | None | ERR11465593 | Sensitive | lineage4.3.4.1 | None | ERR11466179 | Sensitive | lineage4.9.1 | None | ERR11464958 | Sensitive | lineage4.3.4.1 | None | ERR11465205 | Sensitive | lineage4.3.2.1 | None | ERR2229174 | Sensitive | lineage4.8 | None | ERR11465587 | Sensitive | lineage4.3.4.1 | None | SRR6485155 | Sensitive | lineage2.2.1 | None | ERR2229290 | Sensitive | lineage4.8 | None | ERR11465480 | Sensitive | lineage4.1.2 | None | ERR11465865 | Sensitive | lineage4.3.4.2.1 | None | ERR11466152 | Sensitive | lineage4.8.1 | None | ERR11465816 | Sensitive | lineage4.3.4.1 | None | ERR11465346 | Sensitive | lineage4.3.4.2.1 | None | ERR11465027 | Sensitive | lineage4.3.2.1 | None | ERR11466275 | Sensitive | lineage4.3.2.1 | None | ERR11465594 | Sensitive | lineage4.1.1.1 | None | ERR11466417 | Sensitive | lineage4.3.4.1 | None | ERR11466575 | Sensitive | lineage4.3.2.1 | None | ERR11466485 | Sensitive | lineage1.2.2.1 | None | ERR4822302 | Pre-XDR-TB | lineage2.2.1 | de | ERR11465769 | Sensitive | lineage4.3.2.1 | None | ERR11465775 | Sensitive | lineage4.3.2.1 | None | ERR2229293 | Sensitive | lineage4.8 | None | ERR2229289 | Sensitive | lineage4.8 | None | ERR2229811 | Other | lineage4.8 | dk | ERR11465497 | Sensitive | lineage4.3.2.1 | None | ERR11465740 | Sensitive | lineage4.3.4.2.1 | None | ERR11466509 | Sensitive | lineage4.3.4.1 | None | ERR11465761 | Sensitive | lineage4.9.1 | None | ERR11465739 | Sensitive | lineage4.4.1.1 | None | ERR11465601 | Sensitive | lineage4.1.2.1 | None | ERR11466228 | Sensitive | lineage4.3.4.2.1 | None | ERR4827459 | Pre-XDR-TB | lineage2.2.1 | None |
---|