lineage | Count |
---|---|
lineage1.1.1 | 1 |
lineage2.2.1 | 11 |
lineage1.2.1.2 | 1 |
La1.7 | 1 |
lineage4.4.1.1 | 9 |
La1.2 | 1 |
lineage1.1.3.1 | 2 |
lineage4.8 | 47 |
lineage4.5 | 5 |
lineage4.3.4.2.1 | 18 |
lineage4.8.1 | 5 |
lineage3 | 6 |
lineage4.1.2.1 | 13 |
lineage4.3.2.1 | 9 |
lineage4.3.4.1 | 8 |
lineage4.1.1.3 | 3 |
lineage1.1.2 | 3 |
lineage1.1.1.1 | 3 |
lineage4.3.3 | 6 |
lineage1.2.1.2.1 | 6 |
lineage4.3 | 1 |
lineage1.2.2.2 | 8 |
lineage4.6.2.2 | 2 |
lineage4.6.5 | 1 |
lineage1.1.3.2 | 2 |
lineage4.9.1 | 4 |
lineage4.9 | 2 |
lineage4.2.1.1 | 1 |
lineage4.2.2.2 | 2 |
lineage4.4.2 | 1 |
lineage4.1.4 | 1 |
lineage1.2.2 | 1 |
lineage4.3.2 | 2 |
lineage1.2.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage3.1 | 1 |
lineage4.4.1.1;lineage4.9.1 | 1 |
2 | |
lineage1.1.3.3 | 1 |
lineage2.2.1.1 | 1 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 195 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR29441044 | Sensitive | lineage1.1.1 | None |
SRR6785303 | Sensitive | lineage2.2.1 | None |
SRR29440819 | Sensitive | lineage1.2.1.2 | None |
SRR13986561 | Other | La1.7 | None |
SRR29126195 | Sensitive | lineage4.4.1.1 | None |
SRR13986568 | Other | La1.2 | None |
SRR11972305 | Sensitive | lineage1.1.3.1 | None |
ERR2229128 | Sensitive | lineage4.8 | dk |
SRR29440881 | Sensitive | lineage4.5 | None |
SRR29441054 | Other | lineage4.5 | None |
SRR6785536 | Other | lineage2.2.1 | None |
ERR11465637 | Sensitive | lineage4.3.4.2.1 | None |
ERR11466021 | Sensitive | lineage4.8.1 | None |
SRR14088365 | XDR-TB | lineage3 | None |
ERR11466495 | Sensitive | lineage4.1.2.1 | None |
ERR11466521 | Sensitive | lineage4.1.2.1 | None |
ERR11465664 | Sensitive | lineage4.3.2.1 | None |
ERR11465683 | Sensitive | lineage4.1.2.1 | None |
ERR11465981 | Sensitive | lineage4.3.4.1 | None |
ERR11465623 | Sensitive | lineage4.1.1.3 | None |
ERR11465619 | Sensitive | lineage4.3.4.1 | None |
ERR11465560 | MDR-TB | lineage1.1.2 | None |
ERR11465740 | Sensitive | lineage4.3.4.2.1 | None |
SRR29440928 | Sensitive | lineage4.8 | None |
ERR4821162 | Sensitive | lineage4.8 | None |
ERR11464953 | Sensitive | lineage4.1.1.3 | None |
ERR11465253 | Sensitive | lineage4.3.4.1 | None |
ERR11465782 | Other | lineage4.4.1.1 | None |
ERR11465539 | Sensitive | lineage4.3.4.2.1 | None |
ERR11465749 | Sensitive | lineage4.3.2.1 | None |
ERR11465993 | Sensitive | lineage4.1.2.1 | None |
ERR11465704 | Sensitive | lineage4.3.4.2.1 | None |
ERR11465007 | Sensitive | lineage4.3.4.2.1 | None |
ERR11465027 | Sensitive | lineage4.3.2.1 | None |
ERR11465321 | Sensitive | lineage4.8.1 | None |
ERR2229207 | Sensitive | lineage4.8 | dk |
ERR11465259 | Sensitive | lineage4.3.4.1 | None |
ERR11465205 | Sensitive | lineage4.3.2.1 | None |
ERR11465728 | Sensitive | lineage4.4.1.1 | None |
ERR11465850 | Sensitive | lineage4.8.1 | None |
ERR2229426 | Sensitive | lineage4.8 | dk |
ERR2229640 | Sensitive | lineage4.8 | dk |
ERR11466134 | Sensitive | lineage4.3.2.1 | None |
SRR11972363 | MDR-TB | lineage2.2.1 | None |
ERR11464984 | Sensitive | lineage4.8 | None |
ERR2229576 | Sensitive | lineage4.8 | None |
SRR29440769 | Other | lineage1.1.1.1 | None |
ERR11465032 | Sensitive | lineage4.3.4.2.1 | None |
SRR6257066 | HR-TB | lineage4.3.3 | None |
ERR11465783 | Sensitive | lineage4.3.4.2.1 | None |
SRR22249402 | Sensitive | lineage2.2.1 | None |
SRR29440607 | Sensitive | lineage4.4.1.1 | None |
SRR29441057 | HR-TB | lineage4.5 | None |
SRR29441071 | Sensitive | lineage1.2.1.2.1 | None |
SRR29440748 | Sensitive | lineage1.1.2 | None |
SRR29441049 | Sensitive | lineage4.3 | None |
SRR6785167 | Sensitive | lineage2.2.1 | None |
SRR28646065 | Sensitive | lineage4.8 | None |
ERR11466222 | HR-TB | lineage1.2.2.2 | None |
ERR11465176 | Sensitive | lineage4.3.4.1 | None |
ERR11465787 | Sensitive | lineage4.4.1.1 | None |
ERR2229370 | RR-TB | lineage4.8 | None |
SRR10272570 | Sensitive | lineage4.4.1.1 | None |
ERR2229471 | Sensitive | lineage4.8 | dk |
SRR29441091 | Sensitive | lineage4.6.2.2 | None |
ERR11465239 | Sensitive | lineage4.8.1 | None |
ERR11466502 | MDR-TB | lineage4.1.2.1 | None |
ERR11081688 | MDR-TB | lineage4.6.5 | None |
ERR11465383 | HR-TB | lineage4.3.4.2.1 | None |
ERR11466464 | Sensitive | lineage1.1.3.2 | None |
ERR11465322 | Sensitive | lineage4.9.1 | None |
SRR14088384 | MDR-TB | lineage3 | None |
ERR11466459 | Sensitive | lineage4.9.1 | None |
ERR11466409 | Sensitive | lineage4.9.1 | None |
SRR29441021 | Sensitive | lineage1.2.2.2 | None |
ERR11466179 | Sensitive | lineage4.9.1 | None |
ERR11466082 | Sensitive | lineage4.3.4.2.1 | None |
ERR11466473 | Sensitive | lineage4.3.4.1 | None |
SRR1002693 | HR-TB | lineage4.3.3 | None |
ERR11465601 | Sensitive | lineage4.1.2.1 | None |
ERR11466484 | Sensitive | lineage4.4.1.1 | None |
ERR2229764 | Sensitive | lineage4.8 | None |
ERR9117769 | RR-TB | lineage4.1.1.3 | None |
ERR2229262 | Sensitive | lineage4.8 | dk |
SRR22249395 | Sensitive | lineage1.2.1.2.1 | None |
SRR6257044 | MDR-TB | lineage2.2.1 | None |
ERR2229802 | Sensitive | lineage4.8 | None |
ERR11465745 | Sensitive | lineage4.3.4.2.1 | None |
ERR11465706 | Sensitive | lineage1.2.2.2 | None |
ERR11465830 | Sensitive | lineage4.9 | None |
SRR24466789 | MDR-TB | lineage4.8 | None |
SRR29126899 | Sensitive | lineage4.1.2.1 | None |
ERR11465861 | Sensitive | lineage4.8.1 | None |
ERR4822304 | MDR-TB | lineage4.1.2.1 | de |
SRR6785315 | Sensitive | lineage4.3.3 | None |
ERR4827932 | MDR-TB | lineage2.2.1 | None |
SRR29440937 | Sensitive | lineage1.1.3.1 | None |
ERR2229068 | Sensitive | lineage4.8 | dk |
SRR6785470 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2229257 | Sensitive | lineage4.8 | None |
SRR16088468 | MDR-TB | lineage4.3.3 | None |
SRR29440841 | Sensitive | lineage1.1.2 | None |
ERR11466424 | HR-TB | lineage4.3.4.2.1 | None |
SRR29126442 | Sensitive | lineage4.6.2.2 | None |
ERR13289476 | Pre-XDR-TB | lineage2.2.1 | None |
SRR12199423 | Sensitive | lineage1.2.2.2 | None |
SRR29441061 | Sensitive | lineage4.8 | None |
SRR23862015 | Sensitive | lineage4.2.1.1 | None |
ERR11465223 | Sensitive | lineage4.1.2.1 | None |
ERR2229765 | Sensitive | lineage4.8 | dk |
SRR29440689 | Sensitive | lineage4.2.2.2 | None |
ERR11466565 | Sensitive | lineage4.3.4.2.1 | None |
ERR2229620 | Sensitive | lineage4.8 | None |
SRR29440768 | Sensitive | lineage4.1.2.1 | None |
SRR29440832 | Sensitive | lineage4.4.2 | None |
ERR2229362 | Sensitive | lineage4.8 | None |
ERR11466489 | Sensitive | lineage4.3.4.1 | None |
ERR11465227 | Sensitive | lineage4.8 | None |
SRR29440863 | HR-TB | lineage4.1.4 | None |
ERR11466138 | Sensitive | lineage1.2.2.2 | None |
ERR2229296 | Sensitive | lineage4.8 | None |
ERR2229157 | Sensitive | lineage4.8 | None |
ERR2229251 | Sensitive | lineage4.8 | dk |
ERR2229271 | Sensitive | lineage4.8 | None |
SRR29273931 | RR-TB | lineage4.8 | None |
SRR29440888 | Sensitive | lineage1.2.2 | None |
SRR6785298 | HR-TB | lineage4.3.3 | None |
SRR29440648 | Sensitive | lineage2.2.1 | None |
ERR7975632 | MDR-TB | lineage4.1.2.1 | None |
SRR29440944 | HR-TB | lineage1.2.1.2.1 | None |
ERR11465396 | Sensitive | lineage1.2.2.2 | None |
ERR11465596 | Sensitive | lineage4.3.2 | None |
ERR2229174 | Sensitive | lineage4.8 | None |
ERR2229811 | Other | lineage4.8 | dk |
ERR11464996 | Sensitive | lineage4.9 | None |
ERR2229148 | Other | lineage4.8 | dk |
ERR2229604 | Sensitive | lineage4.8 | dk |
ERR11465775 | Sensitive | lineage4.3.2.1 | None |
ERR2206054 | Sensitive | lineage4.3.2 | None |
ERR2229483 | Sensitive | lineage4.8 | None |
ERR11465568 | Sensitive | lineage1.2.2.1 | None |
ERR2229139 | Sensitive | lineage4.8 | None |
ERR2229290 | Sensitive | lineage4.8 | None |
ERR2229359 | Sensitive | lineage4.8 | dk |
ERR2229472 | Sensitive | lineage4.8 | dk |
ERR11465599 | Sensitive | lineage4.3.2.1 | None |
ERR11465630 | Sensitive | lineage4.3.2.1 | None |
ERR11465657 | Sensitive | lineage4.4.1.2 | None |
ERR11465866 | Sensitive | lineage1.1.3.2 | None |
ERR11466511 | MDR-TB | lineage4.3.2.1 | None |
SRR29440635 | Sensitive | lineage3.1 | None |
ERR2229075 | Sensitive | lineage4.8 | dk |
ERR2229155 | Sensitive | lineage4.8 | None |
ERR2229222 | Sensitive | lineage4.8 | dk |
ERR2229595 | Sensitive | lineage4.8 | dk |
ERR2229685 | Sensitive | lineage4.8 | None |
ERR2229592 | Sensitive | lineage4.8 | None |
SRR1002690 | MDR-TB | lineage2.2.1 | None |
SRR7069090 | Sensitive | lineage3 | None |
ERR11466505 | Sensitive | lineage4.4.1.1;lineage4.9.1 | None |
ERR2659170 | Sensitive | None | |
ERR11465016 | Sensitive | lineage4.3.4.2.1 | None |
ERR11465053 | Sensitive | lineage4.3.4.2.1 | None |
ERR11465756 | Sensitive | lineage4.3.3 | None |
ERR2659167 | Sensitive | None | |
ERR11465351 | Sensitive | lineage4.1.2.1 | None |
ERR11465899 | Sensitive | lineage4.3.4.2.1 | None |
ERR11466385 | Sensitive | lineage4.4.1.1 | None |
ERR2229399 | Sensitive | lineage4.8 | None |
SRR29274118 | Pre-XDR-TB | lineage4.8 | None |
ERR11465216 | Pre-XDR-TB | lineage1.2.2.2 | None |
SRR6785474 | Sensitive | lineage4.8 | None |
SRR29440716 | HR-TB | lineage1.1.3.3 | None |
SRR29440971 | Sensitive | lineage1.2.1.2.1 | None |
ERR2229252 | Sensitive | lineage4.8 | dk |
SRR11972165 | HR-TB | lineage2.2.1.1 | None |
SRR29440776 | Sensitive | lineage3 | None |
ERR11465628 | Sensitive | lineage4.3.4.2.1 | None |
SRR29440911 | Sensitive | lineage1.2.1.2.1 | None |
SRR29440807 | MDR-TB | lineage1.2.1.2.1 | None |
ERR11465609 | Sensitive | lineage4.1.2.1 | None |
ERR11465407 | Sensitive | lineage4.4.1.1 | None |
ERR11465508 | Sensitive | lineage4.3.4.2.1 | None |
SRR29441010 | HR-TB | lineage1.1.1.1 | None |
ERR2229459 | Sensitive | lineage4.8 | dk |
ERR11465647 | Sensitive | lineage4.3.4.2.1 | None |
SRR29440569 | Sensitive | lineage4.5 | None |
SRR29441113 | Other | lineage1.1.1.1 | None |
SRR29441042 | Sensitive | lineage4.5 | None |
SRR29126173 | Sensitive | lineage3 | None |
ERR11465726 | Sensitive | lineage3.1.1 | None |
SRR29440555 | HR-TB | lineage1.2.2.2 | None |
ERR11465816 | Sensitive | lineage4.3.4.1 | None |
SRR29126179 | Sensitive | lineage3 | None |
SRR29126450 | Sensitive | lineage4.2.2.2 | None |