Rv1979c - c.-670_-607delNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG

Drug resistance types
157 Sensitive 10 RR-TB 47 HR-TB 54 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 9 Other
lineage Counts
lineage Count
lineage4.2.2 284
lineage2.2.1;lineage4.2.2 4
La1.6;La3;M.canetti;lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 289
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10040517 MDR-TB lineage4.2.2 None
SRR27069416 MDR-TB lineage4.2.2 None
SRR21277777 Sensitive lineage4.2.2 None
SRR15316598 Sensitive lineage4.2.2 None
ERR4811121 Sensitive lineage4.2.2 cn
SRR25628587 HR-TB lineage4.2.2 None
ERR3132098 MDR-TB lineage4.2.2 None
SRR13423561 MDR-TB lineage4.2.2 None
ERR3559298 HR-TB lineage4.2.2 None
SRR6824597 MDR-TB lineage4.2.2 cn
SRR20969745 Pre-XDR-TB lineage4.2.2 None
SRR15368850 Sensitive lineage4.2.2 None
ERR7339143 Sensitive lineage4.2.2 None
SRR10305799 Sensitive lineage4.2.2 None
SRR18914188 Other lineage4.2.2 None
SRR15316236 Sensitive lineage4.2.2 None
SRR21277686 Sensitive lineage4.2.2 None
ERR4818296 Sensitive lineage4.2.2 None
SRR28859888 Sensitive lineage4.2.2 None
ERR4811347 MDR-TB lineage4.2.2 cn
ERR2179744 HR-TB lineage4.2.2 cn
SRR20969929 Sensitive lineage4.2.2 None
ERR13263855 Sensitive lineage4.2.2 None
SRR17703710 Sensitive lineage4.2.2 None
ERR13291154 HR-TB lineage4.2.2 None
SRR21277032 Sensitive lineage4.2.2 None
SRR21277855 HR-TB lineage4.2.2 None
ERR11081173 Sensitive lineage4.2.2 None
SRR10040154 MDR-TB lineage2.2.1;lineage4.2.2 None
SRR15369054 Sensitive lineage4.2.2 None
ERR3559278 HR-TB lineage4.2.2 None
ERR13292065 RR-TB lineage4.2.2 None
SRR15368808 Sensitive lineage4.2.2 None
SRR20969452 MDR-TB lineage4.2.2 None
SRR29096197 HR-TB lineage4.2.2 None
SRR10040402 MDR-TB lineage4.2.2 None
SRR28868642 Sensitive lineage4.2.2 None
ERR13245219 MDR-TB lineage4.2.2 None
SRR10040548 MDR-TB lineage2.2.1;lineage4.2.2 None
SRR15368853 Sensitive lineage4.2.2 None
SRR20969690 Sensitive lineage4.2.2 None
ERR3559286 HR-TB lineage4.2.2 None
SRR15368713 Sensitive lineage4.2.2 None
SRR21887703 MDR-TB lineage4.2.2 None
ERR13272898 Sensitive lineage4.2.2 None
SRR7131217 HR-TB lineage4.2.2 None
SRR11662236 MDR-TB lineage4.2.2 None
ERR3559291 HR-TB lineage4.2.2 None
SRR20969422 MDR-TB lineage4.2.2 None
ERR3559295 HR-TB lineage4.2.2 None
SRR10040383 MDR-TB lineage4.2.2 None
SRR15315760 Sensitive lineage4.2.2 None
ERR4815971 Sensitive lineage4.2.2 None
SRR21722113 Sensitive lineage4.2.2 None
SRR671832 Sensitive lineage4.2.2 cn
SRR21277042 Sensitive lineage4.2.2 None
SRR21291116 Sensitive lineage4.2.2 None
SRR15316157 Sensitive lineage4.2.2 None
SRR15316227 Sensitive lineage4.2.2 None
SRR15316421 MDR-TB lineage4.2.2 None
SRR18549037 Sensitive lineage4.2.2 None
SRR18548986 Sensitive lineage4.2.2 None
SRR20969537 Sensitive lineage4.2.2 None
SRR29052941 Sensitive lineage4.2.2 None
SRR15315814 Sensitive lineage4.2.2 None
SRR15368912 Sensitive lineage4.2.2 None
ERR4828757 Sensitive lineage4.2.2 vn
SRR21277076 Sensitive lineage4.2.2 None
SRR29017282 Sensitive lineage4.2.2 None
SRR15316575 Sensitive lineage4.2.2 None
SRR20970048 Other lineage4.2.2 None
SRR16115071 Pre-XDR-TB lineage4.2.2 None
SRR15368911 Sensitive lineage4.2.2 None
ERR3559277 HR-TB lineage4.2.2 None
SRR21277547 Sensitive lineage4.2.2 None
ERR2179692 Sensitive lineage4.2.2 cn
ERR2179745 HR-TB lineage4.2.2 None
SRR10040251 MDR-TB lineage4.2.2 None
ERR3559299 HR-TB lineage4.2.2 None
SRR15316453 Sensitive lineage4.2.2 None
SRR21277239 Sensitive lineage4.2.2 None
ERR3561760 HR-TB lineage4.2.2 None
SRR15369045 HR-TB lineage4.2.2 None
ERR4821431 Sensitive lineage4.2.2 None
SRR15723231 HR-TB lineage4.2.2 None
SRR15368893 HR-TB lineage4.2.2 None
SRR15316064 Sensitive lineage4.2.2 None
SRR17712077 Sensitive lineage4.2.2 None
ERR13290938 Sensitive lineage4.2.2 None
SRR21576613 MDR-TB lineage4.2.2 None
SRR10305985 Sensitive lineage4.2.2 None
ERR3559296 HR-TB lineage4.2.2 None
ERR13193757 MDR-TB lineage4.2.2 None
ERR3559280 HR-TB lineage4.2.2 None
DRR261103 Sensitive lineage4.2.2 None
SRR15368979 Sensitive lineage4.2.2 None
SRR10040142 MDR-TB lineage4.2.2 None
SRR18911561 Pre-XDR-TB lineage4.2.2 None
SRR10333501 Sensitive lineage4.2.2 None
SRR21279463 Sensitive lineage4.2.2 None
SRR10333504 Sensitive lineage4.2.2 None
SRR10305686 Sensitive lineage4.2.2 None
SRR10305751 Sensitive lineage4.2.2 None
SRR1724005 RR-TB lineage4.2.2 None
SRR28409503 Sensitive lineage4.2.2 None
SRR8217896 Sensitive lineage4.2.2 None
ERR4178246 Sensitive lineage4.2.2 None
SRR25628592 MDR-TB lineage4.2.2 None
SRR21031707 Sensitive lineage4.2.2 None
ERR2179650 RR-TB lineage4.2.2 None
ERR3559274 HR-TB lineage4.2.2 None
SRR20969960 Sensitive lineage4.2.2 None
SRR21746998 MDR-TB lineage4.2.2 None
SRR17687535 Sensitive lineage4.2.2 None
SRR10305986 Other lineage4.2.2 None
ERR3559304 HR-TB lineage4.2.2 None
ERR11050450 Sensitive lineage4.2.2 None
SRR21277836 Other lineage4.2.2 None
ERR3559307 HR-TB lineage4.2.2 None
SRR3647353 MDR-TB lineage4.2.2 None
ERR3559297 HR-TB lineage4.2.2 None
SRR15316060 Sensitive lineage4.2.2 None
ERR6865863 Sensitive lineage4.2.2 None
SRR20632792 MDR-TB lineage4.2.2 None
SRR29051307 Sensitive lineage4.2.2 None
SRR15368848 Sensitive lineage4.2.2 None
SRR29053345 HR-TB lineage4.2.2 None
SRR11662499 MDR-TB lineage4.2.2 None
ERR3559306 HR-TB lineage4.2.2 None
SRR15368888 Sensitive lineage4.2.2 None
ERR4817275 Other lineage4.2.2 None
ERR2843471 Sensitive lineage4.2.2 None
SRR15723116 Sensitive lineage4.2.2 None
SRR10305629 Sensitive lineage4.2.2 None
SRR10305981 MDR-TB lineage4.2.2 None
SRR10333502 Sensitive lineage4.2.2 None
SRR10040265 MDR-TB lineage4.2.2 None
SRR10040458 Sensitive lineage4.2.2 None
SRR11662222 MDR-TB lineage4.2.2 None
SRR21711110 Sensitive lineage4.2.2 None
SRR21277197 Other lineage4.2.2 None
ERR3132297 Other lineage4.2.2 None
SRR10040438 MDR-TB lineage2.2.1;lineage4.2.2 None
SRR27069420 Pre-XDR-TB lineage4.2.2 None
SRR10809127 Sensitive lineage4.2.2 None
SRR11662362 Pre-XDR-TB lineage4.2.2 None
SRR20970018 Sensitive lineage4.2.2 None
SRR11662312 MDR-TB lineage4.2.2 None
SRR671782 Sensitive lineage4.2.2 cn
SRR10305648 Sensitive lineage4.2.2 None
SRR15723104 Sensitive lineage4.2.2 None
ERR2020068 Sensitive lineage4.2.2 None
SRR17732465 Sensitive lineage4.2.2 None
ERR3559285 HR-TB lineage4.2.2 None
ERR13291692 Sensitive lineage4.2.2 None
SRR10333496 Sensitive lineage4.2.2 None
ERR4820129 Sensitive lineage4.2.2 gb
SRR10230353 Sensitive lineage4.2.2 None
ERR9119323 Sensitive lineage4.2.2 None
ERR9119455 Other lineage4.2.2 None
SRR21277332 Other lineage4.2.2 None
SRR25628588 HR-TB lineage4.2.2 None
ERR3559281 HR-TB lineage4.2.2 None
ERR3559282 HR-TB lineage4.2.2 None
SRR15368841 HR-TB lineage4.2.2 None
SRR20969577 Sensitive lineage4.2.2 None
ERR3559294 HR-TB lineage4.2.2 None
SAMN03246713 RR-TB lineage4.2.2 cn
SRR15316263 Sensitive lineage4.2.2 None
SRR10040468 MDR-TB lineage4.2.2 None
SRR10333498 Sensitive lineage4.2.2 None
ERR3559300 HR-TB lineage4.2.2 None
SRR10333494 Sensitive lineage4.2.2 None
ERR2179723 Sensitive lineage4.2.2 cn
SRR10040356 Pre-XDR-TB lineage4.2.2 None
SRR11662415 MDR-TB lineage4.2.2 None
SRR12062501 MDR-TB lineage4.2.2 None
SRR15368718 Sensitive lineage4.2.2 None
SRR7069369 Sensitive lineage4.2.2 None
SRR20632784 MDR-TB lineage4.2.2 None
SRR20969373 Sensitive lineage4.2.2 None
SRR10040459 Pre-XDR-TB lineage4.2.2 None
SRR21277458 Sensitive lineage4.2.2 None
SRR10333500 Sensitive lineage4.2.2 None
SRR15315863 Sensitive lineage4.2.2 None
SRR15368880 Sensitive lineage4.2.2 None
ERR3273125 RR-TB lineage4.2.2 None
ERR3559290 HR-TB lineage4.2.2 None
SRR15316386 Sensitive lineage4.2.2 None
SRR21277659 Sensitive lineage4.2.2 None
SRR10040194 MDR-TB lineage4.2.2 None
SRR15722998 Pre-XDR-TB lineage4.2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR15316093 Sensitive lineage4.2.2 None
SRR20969397 Sensitive lineage4.2.2 None
SRR15316397 MDR-TB lineage4.2.2 None
ERR3559303 Sensitive lineage4.2.2 None
SRR1724002 RR-TB lineage4.2.2 None
ERR4819147 Sensitive lineage4.2.2 None
SRR8217885 Sensitive lineage4.2.2 None
SRR15316270 Sensitive lineage4.2.2 None
ERR2179637 MDR-TB lineage4.2.2 None
SRR11662458 MDR-TB lineage4.2.2 None
ERR11081775 Sensitive lineage4.2.2 None
ERR13292315 Pre-XDR-TB lineage4.2.2 None
SRR1724007 MDR-TB lineage4.2.2 None
ERR3559279 HR-TB lineage4.2.2 None
SRR29096641 Sensitive lineage4.2.2 None
SRR11662441 MDR-TB lineage4.2.2 None
ERR13252240 MDR-TB lineage4.2.2 None
ERR3559292 HR-TB lineage4.2.2 None
SRR10040391 MDR-TB lineage4.2.2 None
ERR13291079 HR-TB lineage4.2.2 None
SRR19612259 Sensitive lineage4.2.2 None
DRR261022 Sensitive lineage4.2.2 None
SRR15369038 Sensitive lineage4.2.2 None
SRR25628591 MDR-TB lineage4.2.2 None
SRR15316321 Sensitive lineage4.2.2 None
SRR15369049 Sensitive lineage4.2.2 None
SRR21277309 Sensitive lineage4.2.2 None
DRR261129 Sensitive lineage4.2.2 None
SRR10333495 Sensitive lineage4.2.2 None
ERR4829290 HR-TB lineage4.2.2 None
ERR3559301 HR-TB lineage4.2.2 None
SRR15316285 Sensitive lineage4.2.2 None
ERR3559305 HR-TB lineage4.2.2 None
SRR17703715 Sensitive lineage4.2.2 None
SRR12062502 MDR-TB lineage2.2.1;lineage4.2.2 None
SRR20969414 MDR-TB lineage4.2.2 None
SRR15369063 Pre-XDR-TB lineage4.2.2 None
SRR15722974 Sensitive lineage4.2.2 None
SRR29050806 Sensitive lineage4.2.2 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR20970033 Sensitive lineage4.2.2 None
ERR13290910 MDR-TB lineage4.2.2 None
SRR29096204 Sensitive lineage4.2.2 None
SRR29051388 Sensitive lineage4.2.2 None
SRR21277074 Sensitive lineage4.2.2 None
ERR9119246 Sensitive lineage4.2.2 None
SRR21663286 HR-TB lineage4.2.2 None
SRR15368909 Sensitive lineage4.2.2 None
SRR15316116 Sensitive lineage4.2.2 None
SRR15368780 Sensitive lineage4.2.2 None
SRR15723048 Sensitive lineage4.2.2 None
SRR5535719 MDR-TB lineage4.2.2 None
SRR21279415 Sensitive lineage4.2.2 None
SRR29050973 RR-TB lineage4.2.2 None
SRR14519742 HR-TB lineage4.2.2 None
ERR13291069 HR-TB lineage4.2.2 None
SRR10808889 Sensitive lineage4.2.2 None
SRR18511615 Sensitive lineage4.2.2 None
SRR18003017 MDR-TB lineage4.2.2 None
ERR3559284 HR-TB lineage4.2.2 None
ERR3559302 HR-TB lineage4.2.2 None
SRR29050918 Sensitive lineage4.2.2 None
SRR15315942 Sensitive lineage4.2.2 None
SRR1011519 Pre-XDR-TB lineage4.2.2 None
SRR15723050 Sensitive lineage4.2.2 None
SRR10305797 Sensitive lineage4.2.2 None
SRR11662576 MDR-TB lineage4.2.2 None
DRR261041 Sensitive lineage4.2.2 None
SRR21887716 MDR-TB lineage4.2.2 None
SRR21576546 RR-TB lineage4.2.2 None
SRR10040191 RR-TB lineage4.2.2 None
SRR20970007 HR-TB lineage4.2.2 None
ERR7361944 Sensitive lineage4.2.2 None
SRR18511604 Sensitive lineage4.2.2 None
SRR21277201 Sensitive lineage4.2.2 None
ERR4819837 Sensitive lineage4.2.2 None
ERR4828576 Sensitive lineage4.2.2 None
SRR16103895 RR-TB lineage4.2.2 None
SRR21277773 Sensitive lineage4.2.2 None
SRR21279447 Sensitive lineage4.2.2 None
SRR15316134 Sensitive lineage4.2.2 None
SRR15368852 MDR-TB lineage4.2.2 None
ERR2179799 Sensitive lineage4.2.2 cn
ERR4819875 Sensitive lineage4.2.2 gb
SRR15368942 Sensitive lineage4.2.2 None
SRR16370547 MDR-TB lineage4.2.2 None
SRR6480581 Sensitive lineage4.2.2 None
SRR21279429 Sensitive lineage4.2.2 None
SRR27450175 Sensitive lineage4.2.2 None
SRR18511637 Sensitive lineage4.2.2 None
SRR10305787 HR-TB lineage4.2.2 None
SRR10333499 Sensitive lineage4.2.2 None
SRR15368926 Sensitive lineage4.2.2 None
ERR4817796 Sensitive lineage4.2.2 None
SRR833217 Pre-XDR-TB lineage4.2.2 None
SRR21662821 Sensitive lineage4.2.2 None