SRR6832471
|
MDR-TB
|
lineage2.2.1;lineage4.3.4.2
|
None
|
SRR13583510
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29055508
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR12057460
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4817279
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR7363049
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR19221473
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3256259
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
ERR2707021
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR18897178
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1555053
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2512975
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
ERR7363054
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3132259
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2707179
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR29016873
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231801
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR13583322
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR4815824
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
SRR8866471
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164470
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR27980498
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164924
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR21727722
|
Other
|
lineage4.3.4.2
|
None
|
SRR15506892
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12931735
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29126859
|
Other
|
lineage4.3.4.2
|
None
|
SRR7276699
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR10762327
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR1193732
|
Sensitive
|
lineage4.3.4.2
|
np
|
ERR1193724
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
SRR28394016
|
RR-TB
|
lineage4.3.4.2
|
None
|
ERR12790845
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29051561
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR8866450
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR13291585
|
Other
|
lineage4.3.4.2
|
None
|
SRR29126560
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR775340
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR29441100
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11068924
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29539578
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29539851
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4816565
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29126482
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29126588
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR13110318
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR30180413
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR16915748
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017064
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29230773
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231861
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29051331
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR12931738
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR2100728
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29050638
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13266303
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR13284410
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13292145
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR234267
|
Sensitive
|
lineage4.3.4.2
|
us
|
ERR2512587
|
Sensitive
|
lineage4.3.4.2
|
gb
|
ERR4553762
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553931
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR7801217
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR7801219
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9125666
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR19324972
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR7276681
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164569
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164939
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR19303842
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165135
|
Other
|
lineage4.3.4.2
|
None
|
ERR4553517
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017211
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017459
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29050880
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29051592
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR123911
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR867565
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR27980483
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR26112063
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553563
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553943
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2516682
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
SRR22251297
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2884693
|
Sensitive
|
lineage4.3.4.2
|
es
|
SRR13583464
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR27980484
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR13265396
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2516857
|
MDR-TB
|
lineage4.3.4.2
|
gb
|
SRR21686600
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2653171
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR19315445
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017666
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR13583376
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13266242
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9786538
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12931799
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4819874
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR12311962
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11591425
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR10380218
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553934
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR19303795
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3639811
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR27980480
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017196
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231305
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR8773670
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2516640
|
MDR-TB
|
lineage4.3.4.2
|
nl
|
ERR3256256
|
HR-TB
|
lineage4.3.4.2
|
ph
|
ERR4553458
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR12931696
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553807
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4798348
|
Sensitive
|
lineage4.3.4.2
|
in
|
SRR15399205
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12830374
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR25827381
|
Pre-XDR-TB
|
lineage3;lineage4.3.4.2
|
None
|
ERR553032
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017208
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR19428584
|
Other
|
lineage4.3.4.2
|
None
|
ERR4814086
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2516954
|
MDR-TB
|
lineage4.3.4.2
|
gb
|
ERR3275762
|
Sensitive
|
lineage4.3.4.2
|
nl
|
ERR2653023
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6650144
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12931764
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553507
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2706992
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR11067882
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR21239905
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1193823
|
Sensitive
|
lineage4.3.4.2
|
de
|
SRR14164503
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29126229
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29126335
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017022
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017219
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164811
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2653170
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2512917
|
Sensitive
|
lineage4.3.4.2
|
gb
|
ERR2707162
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR6650145
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164758
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017109
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR6336778
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017125
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR12931797
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR275183
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR2706985
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR8866451
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR8866482
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017055
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017375
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11080926
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR16370238
|
Other
|
lineage4.3.4.2
|
None
|
SRR27107247
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29053523
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553642
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2707136
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR11049784
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2707103
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2677470
|
MDR-TB
|
lineage4.3.4.2
|
de
|
ERR4553684
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017660
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553508
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553813
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR234226
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16101267
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6650130
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28045247
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3256254
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
SRR26112082
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR025889
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2513656
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
SRR18909913
|
Other
|
lineage4.3.4.2
|
None
|
ERR2653100
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164537
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14801976
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR7801325
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4821343
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR18912066
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164951
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11049421
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR7363086
|
RR-TB
|
lineage4.3.4.2
|
None
|
ERR4820453
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
SRR29231311
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2706984
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR14164632
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6797413
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6930924
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR4423152
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553580
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28351206
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR6326067
|
Other
|
lineage4.3.4.2
|
None
|
SRR29231689
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR20969622
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR7801260
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2707059
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR1213869
|
Sensitive
|
lineage4.3.4.2
|
br
|
SRR13583498
|
HR-TB
|
lineage4.3.4.1;lineage4.3.4.2
|
None
|
ERR7363051
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29230790
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231680
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13285467
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11775861
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR22249820
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28409336
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR28045935
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553832
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13289680
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29440990
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29681240
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29772730
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29126298
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR30211213
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR30340072
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR30180371
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4195252
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12830367
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12830410
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164703
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164845
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR10969142
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28046344
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR14165042
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165141
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16370370
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR10969174
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11050307
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11082723
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28393330
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4816813
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164547
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164867
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165111
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16097543
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16115035
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2510195
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2652999
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2653077
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2653105
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553844
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7363050
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28044889
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017644
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11082719
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1555041
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4796927
|
Pre-XDR-TB
|
lineage4.3.4.2
|
in
|
SRR30182530
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR14164475
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165066
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29231041
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6797809
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11252584
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR30182781
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1213906
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR2514320
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR13583366
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3276264
|
Pre-XDR-TB
|
lineage4.3.4.2
|
nl
|
SRR14164841
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11082629
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9121800
|
Other
|
lineage4.3.4.2
|
None
|
SRR14164692
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR19428494
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164949
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR18665441
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR11648203
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR6650294
|
Other
|
lineage4.3.4.2
|
None
|
SRR29053092
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2706957
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR13180325
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR4829673
|
Sensitive
|
lineage4.3.4.2
|
it
|
ERR9907698
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR867552
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553958
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR4423169
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR7131104
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR29017249
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR2101010
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2600489
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR9121434
|
Other
|
lineage4.3.4.2
|
None
|
ERR4553436
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR11348141
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR30182659
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6896325
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR28409653
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4820577
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553864
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4828784
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11798636
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2516687
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4553967
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR6797699
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR551508
|
Sensitive
|
lineage4.3.4.2
|
de
|
ERR2513790
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR16115013
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR17856657
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR13583451
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR7910910
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR10969128
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR14165157
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9121456
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28044360
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7363100
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4195722
|
Other
|
lineage4.3.4.2
|
None
|
ERR7801218
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR4423168
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
DRR188917
|
Other
|
lineage4.3.4.2
|
None
|
ERR4813745
|
Sensitive
|
lineage4.3.4.2
|
br
|
SRR7276675
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3148170
|
Pre-XDR-TB
|
lineage4.3.4.2
|
mx
|
ERR11050799
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6832665
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR10969223
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4813759
|
HR-TB
|
lineage4.3.4.2
|
br
|
SRR12931796
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR18714946
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6442525
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7363083
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR8975135
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28170807
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR7517735
|
MDR-TB
|
lineage4.3.4.2
|
ch
|
SRR26112470
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4814020
|
Sensitive
|
lineage4.3.4.2
|
br
|
SRR14164749
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29231768
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017693
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3256236
|
MDR-TB
|
lineage4.3.4.1;lineage4.3.4.2
|
ph
|
ERR266576
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR15014681
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR751852
|
Sensitive
|
lineage4.3.4.2
|
th
|
ERR4553544
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164809
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR15368908
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28868781
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29126691
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR17658007
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2707171
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR3276260
|
Pre-XDR-TB
|
lineage4.3.4.2
|
nl
|
ERR2516329
|
MDR-TB
|
lineage4.3.4.2
|
be
|
ERR2653106
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR25395643
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164521
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR2100354
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4423716
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1034818
|
HR-TB
|
lineage4.3.4.2
|
pt
|
SRR13583482
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR12931792
|
Other
|
lineage4.3.3;lineage4.3.4.2
|
None
|
ERR9786870
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4829902
|
Sensitive
|
lineage4.3.4.2
|
it
|
ERR2707081
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR27980496
|
Other
|
lineage4.3.4.2
|
None
|
ERR11252476
|
Other
|
lineage4.3.4.2
|
None
|
SRR28389825
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2510755
|
Sensitive
|
lineage4.3.4.2
|
it
|
ERR2600572
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR751593
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
SRR29050888
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553522
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29127103
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29539464
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29538964
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017091
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1035278
|
MDR-TB
|
lineage4.3.4.2
|
br
|
ERR2706986
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2707204
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2884717
|
Sensitive
|
lineage4.3.4.2
|
es
|
ERR2653114
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2653082
|
RR-TB
|
lineage4.3.4.2
|
None
|
ERR9121381
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9125389
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR18714945
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR19241781
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6797339
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6797446
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6854705
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29231800
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231342
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4195647
|
Other
|
lineage4.3.4.2
|
None
|
SRR18213924
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2706951
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR6797754
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12830370
|
Sensitive
|
lineage4.3.3;lineage4.3.4
|
None
|
SRR12830390
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2707141
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR19320530
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29217218
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13292161
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR12544185
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9125245
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11252623
|
Other
|
lineage4.3.4.2
|
None
|
SRR29230797
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4818320
|
HR-TB
|
lineage4.3.4.2
|
gb
|
ERR4553468
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3801621
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164498
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6832760
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164912
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4829562
|
Sensitive
|
lineage4.3.4.2
|
it
|
SRR29017165
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR13265704
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR26112186
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2706989
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR29093897
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2707225
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR1193700
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR2513407
|
Sensitive
|
lineage4.3.4.2
|
gb
|
ERR7975672
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2707152
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR29231766
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR12931779
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164910
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165088
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165103
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3148220
|
Sensitive
|
lineage4.3.4.2
|
mx
|
SRR21239986
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017117
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11043325
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4816864
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
SRR21658531
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9121641
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4195238
|
Other
|
lineage4.3.4.2
|
None
|
ERR9121385
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164544
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4797830
|
Pre-XDR-TB
|
lineage4.3.4.2
|
in
|
ERR4817867
|
Sensitive
|
lineage4.3.4.2
|
gb
|
ERR2512751
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR6650109
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6650324
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29231372
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR7361910
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR24256026
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29772529
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1193874
|
Other
|
lineage4.3.4.2
|
sl
|
ERR2706995
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR10808810
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553756
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3132233
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2124091
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR025897
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR11348143
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28868808
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165106
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR14164519
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553482
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR8699109
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR10380217
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR553140
|
Sensitive
|
lineage4.3.4.2
|
de
|
ERR7764437
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR8773667
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR18910994
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR12931729
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29126405
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR13252583
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9787005
|
Other
|
lineage4.3.4.2
|
None
|
ERR3256218
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
ERR4829186
|
Sensitive
|
lineage4.3.4.2
|
it
|
SRR29231788
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29052839
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4814031
|
Sensitive
|
lineage4.3.4.2
|
br
|
SRR12931721
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR114507
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4815779
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553535
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28045444
|
Other
|
lineage4.3.4.2
|
None
|
ERR4815418
|
HR-TB
|
lineage4.3.4.2
|
gb
|
ERR1193820
|
Sensitive
|
lineage4.3.4.2
|
de
|
SRR6045731
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR14164860
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR2100153
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR15014781
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2513831
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
SRR29050890
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR1679651
|
Sensitive
|
lineage4.3.4.2
|
ng
|
SRR14164456
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553833
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231013
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR13264895
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1193743
|
Sensitive
|
lineage4.3.4.2
|
pt
|
SRR14164464
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6797564
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR14165094
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4820622
|
Other
|
lineage4.3.4.2
|
None
|
SRR16058366
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4829373
|
MDR-TB
|
lineage4.3.4.2
|
it
|
ERR1035193
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR14164992
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165131
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2516175
|
MDR-TB
|
lineage4.3.4.2
|
be
|
ERR4813621
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR6045991
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR16058179
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR2707079
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR14165052
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR7131175
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR2653078
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231696
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164858
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553446
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR19303818
|
Other
|
lineage4.3.4.2
|
None
|
SRR12931728
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2884667
|
Sensitive
|
lineage4.3.4.2
|
es
|
ERR4553874
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14165057
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6650380
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4829841
|
Sensitive
|
lineage4.3.4.2
|
it
|
ERR2884659
|
Sensitive
|
lineage4.3.4.2
|
es
|
SRR16058411
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2516907
|
MDR-TB
|
lineage4.3.4.2
|
gb
|
SRR7131115
|
Other
|
lineage4.3.4.2
|
None
|
ERR1193765
|
Sensitive
|
lineage4.3.4.2
|
np
|
SRR19224231
|
Other
|
lineage4.3.4.2
|
None
|
SRR10851718
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165155
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12830365
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12931760
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12931771
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR17657957
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR6398095
|
Sensitive
|
lineage4.3.4.2
|
ca
|
ERR1193649
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2510796
|
HR-TB
|
lineage4.3.4.2
|
it
|
ERR553030_ERR553032_ERR553031
|
Other
|
lineage4.3.4.2
|
None
|
SRR6797563
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6797732
|
Other
|
lineage4.3.4.2
|
None
|
ERR9121148
|
Other
|
lineage4.3.4.2
|
None
|
SRR14164732
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2653142
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2706952
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2707078
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR29231757
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4829195
|
Other
|
lineage4.3.4.2
|
None
|
ERR9125228
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1555060
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR12830371
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29230810
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29053101
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR031489
|
Sensitive
|
lineage4.3.4.2;lineage4.8
|
None
|
ERR718468
|
Sensitive
|
lineage4.3.4.2
|
th
|
SRR6650143
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16057890
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR230104
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR4423157
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017111
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017139
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13261960
|
Sensitive
|
lineage3;lineage4.3.4.2
|
None
|
ERR4816686
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
SRR6650362
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4814120
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29050717
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29052959
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4831270
|
MDR-TB
|
lineage4.3.4.2
|
de
|
ERR2184686
|
Sensitive
|
lineage4.3.4.2
|
pe
|
ERR4813291
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR10851590
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR5153848
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4816972
|
MDR-TB
|
lineage4.3.4.2
|
gb
|
ERR553030
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164413
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164532
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR023454
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR12931713
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12931786
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165021
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR9224953
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4822086
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR21240001
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR21727880
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017460
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1213870
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2707210
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR12268408
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR29017463
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29230995
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553516
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553593
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164958
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR10851599
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4815641
|
Sensitive
|
lineage4.3.4.2
|
gb
|
ERR4820182
|
HR-TB
|
lineage4.3.4.2
|
gb
|
ERR4553695
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR7069776
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2512521
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR14782084
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2707192
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2516951
|
MDR-TB
|
lineage4.3.4.2
|
gb
|
SRR8866467
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2514605
|
Sensitive
|
lineage4.3.4.2
|
gb
|
ERR3132107
|
Other
|
lineage4.3.4.2
|
None
|
ERR4831417
|
Sensitive
|
lineage4.3.4.2
|
de
|
SRR6797385
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR6797769
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6797848
|
Other
|
lineage4.3.4.2
|
None
|
SRR29539401
|
XDR-TB
|
lineage4.3.4.2
|
None
|
SRR18149479
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4817688
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4813923
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29127091
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR13285896
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR10762346
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR2027232
|
Other
|
lineage4.3.4.2
|
None
|
SRR14164936
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4829252
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR2884660
|
Sensitive
|
lineage4.3.4.2
|
es
|
SRR12931737
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9121734
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR10851609
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164501
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4195237
|
Other
|
lineage4.3.4.2
|
None
|
SRR16088466
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393251
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553472
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR14165038
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3256234
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
ERR4423561
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR21690926
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2513624
|
Sensitive
|
lineage4.3.4.2
|
gb
|
ERR2653149
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164497
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4822477
|
Sensitive
|
lineage4.3.4.2
|
de
|
SRR12931805
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16058336
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR15368877
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164731
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9125709
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR8866465
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2707181
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR10969187
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2517107
|
MDR-TB
|
lineage4.3.4.2
|
gb
|
SRR18665451
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR031491
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553405
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553728
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4814068
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28389857
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4813958
|
RR-TB
|
lineage4.3.4.2
|
br
|
SRR14164643
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR5817470
|
MDR-TB
|
lineage4.3.4.2
|
au
|
SRR29051050
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14165079
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164369
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2653196
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393997
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017224
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29017189
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR14165065
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29017456
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR29093275
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9125827
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29231763
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR9786239
|
Other
|
lineage4.3.4.2
|
None
|
SRR6797821
|
Other
|
lineage2.2.1;lineage4.3.4.2
|
None
|
SRR14164383
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2707018
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR14164495
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR16058492
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR8866483
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR21690108
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11044021
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4814061
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6797613
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6650168
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9121799
|
Other
|
lineage4.3.4.2
|
None
|
ERR4797192
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.3.4.2
|
in
|
ERR4816290
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR12931769
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4815499
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3799552
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR13583507
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR16058148
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3256115
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
SRR7131119
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2516554
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287312
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
SRR13583374
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR2100787
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28868413
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29230990
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29230772
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231662
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11776000
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3148200
|
MDR-TB
|
lineage4.3.4.2
|
mx
|
SRR18910992
|
Other
|
lineage4.3.4.2
|
None
|
SRR29231825
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6797561
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR16370597
|
Other
|
lineage4.3.4.2
|
None
|
SRR18213876
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3132108
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR16057941
|
Other
|
lineage4.3.4.2
|
None
|
ERR13292227
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR14164846
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR19276627
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR12544224
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3256126
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
SRR21722062
|
Sensitive
|
lineage4.3.4.2
|
None
|
SAMEA2535082
|
Other
|
lineage4.3.4.2
|
None
|
ERR2707231
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR14164948
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9125572
|
Other
|
lineage4.3.4.2
|
None
|
SRR5338522
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR6832498
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR14165150
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4423713
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4195833
|
Other
|
lineage4.3.4.2
|
None
|
SRR11972230
|
Other
|
lineage4.3.4.2
|
None
|
ERR9121798
|
Other
|
lineage4.3.4.2
|
None
|
SRR14164465
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29231792
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11044517
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR26112477
|
Other
|
lineage2.2.1.2;lineage4.3.4.2
|
None
|
SRR2100381
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9786354
|
Other
|
lineage4.3.4.2
|
None
|
ERR4818697
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR29126555
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2707172
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR4553616
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2513747
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR5818623
|
Sensitive
|
lineage4.3.4.2
|
dj
|
ERR2707209
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2707004
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR11044610
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR22250062
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1035293
|
MDR-TB
|
lineage4.3.4.2
|
br
|
SRR13583499
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR21657636
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9125400
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553442
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR15399214
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR7764329
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR2515395
|
RR-TB
|
lineage4.3.4.2
|
za
|
ERR12544168
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553427
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164947
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4814053
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165053
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4814060
|
Sensitive
|
lineage4.3.4.2
|
br
|
SRR6650311
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR403382
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR27980486
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164911
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4821138
|
Sensitive
|
lineage4.3.4.2
|
gb
|
SRR19392955
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11042986
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR21587554
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR29231779
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231009
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13261961
|
Other
|
lineage3;lineage4.3.4.2
|
None
|
ERR2707061
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR11044025
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164935
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2707107
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR11044267
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR294208
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3132153
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR29017047
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR2653032
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2653122
|
XDR-TB
|
lineage4.3.4.2
|
None
|
ERR1193764
|
Sensitive
|
lineage4.3.4.2
|
np
|
ERR4553809
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13291846
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR7068921
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR10851673
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR6866409
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4553669
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4553426
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7801314
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9125575
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6398065
|
Sensitive
|
lineage4.3.4.2
|
ca
|
ERR117730
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12931718
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR12830373
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2514487
|
Pre-XDR-TB
|
lineage4.3.4.2
|
gb
|
ERR7363090
|
Sensitive
|
lineage4.1.2.1;lineage4.3.4.2
|
None
|
ERR4829272
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR9786738
|
Other
|
lineage4.3.4.2
|
None
|
SRR20139563
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR6797864
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165127
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164399
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164756
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14165044
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4799711
|
Sensitive
|
lineage4.3.4.2
|
in
|
SRR19575907
|
Other
|
lineage4.3.4.2
|
None
|
SRR28409478
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR14164406
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1193694
|
Sensitive
|
lineage4.3.4.2
|
it
|
ERR9786346
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR3256197
|
MDR-TB
|
lineage4.3.4.2
|
ph
|
ERR4553447
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29016972
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2706949
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
SRR14164735
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2707013
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR4553621
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13264937
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR11049375
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR11348147
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR14164966
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR4819359
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR553031
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2600571
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6650107
|
Other
|
lineage4.3.4.2
|
None
|
ERR2707196
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR4800094
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR16370228
|
Other
|
lineage4.3.4.2
|
None
|