Rv2754c - c.552G>T
Drug resistance types
0 Sensitive
2 RR-TB
0 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 28 |
| lineage4.9 | 2 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5216983 | Other | La1.8.1 | None | ERR564336 | Other | La1.8.1 | None | ERR1023509 | Other | lineage4.9 | None | ERR564357 | Other | La1.8.1 | None | ERR564356 | Other | La1.8.1 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR564267 | Other | La1.8.1 | None | SRR5216853 | Other | La1.8.1 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR5216742 | Other | La1.8.1 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR5216793 | Other | La1.8.1 | None | SRR5216847 | Other | La1.8.1 | None | SRR7617498 | Other | La1.8.1 | None | SRR7617743 | Other | La1.8.1 | None | SRR5216908 | Other | La1.8.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR564359 | Other | La1.8.1 | None | ERR564355 | Other | La1.8.1 | None | ERR564291 | Other | La1.8.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR564347 | Other | La1.8.1 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR5216889 | Other | La1.8.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR7617826 | Other | La1.8.1 | None | SRR7617828 | Other | La1.8.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR7617825 | Other | La1.8.1 | None | SRR7617823 | Other | La1.8.1 | None | ERR564313 | Other | La1.8.1 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR7617598 | Other | La1.8.1 | None | SRR5216825 | Other | La1.8.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR5216913 | Other | La1.8.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR7617366 | Other | La1.8.1 | None | ERR564298 | Other | La1.8.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR564350 | Other | La1.8.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
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