Rv2780 - c.-53A>T
Drug resistance types
181 Sensitive
4 RR-TB
11 HR-TB
20 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 11 |
| lineage1.1.3 | 138 |
| lineage4.3.3 | 7 |
| M.canetti | 3 |
| lineage4.6.1.2 | 19 |
| lineage1.1.2;lineage1.1.3 | 1 |
| lineage3.1.2 | 2 |
| lineage1.1.1 | 29 |
| lineage3 | 4 |
| lineage2.2.1 | 5 |
| La3;M.canetti | 8 |
| lineage1.2.1.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3 | 1 |
| lineage1.1.3;lineage4.3.3 | 1 |
| lineage4.4.1.1;lineage4.6.1.2 | 2 |
| lineage1.1.3.1 | 2 |
| lineage1.1.3;lineage4.2.2.2 | 1 |
| La2;M.canetti | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 238 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4820016 | Sensitive | lineage4.1.2.1 | gb |
| SRR29016862 | MDR-TB | lineage1.1.3 | None |
| SRR6650231 | Sensitive | lineage1.1.3 | None |
| SRR6650177 | Sensitive | lineage1.1.3 | None |
| SRR21240030 | Sensitive | lineage4.3.3 | None |
| ERR9125480 | Sensitive | M.canetti | None |
| SRR29017177 | MDR-TB | lineage1.1.3 | None |
| SRR18213767 | Sensitive | lineage1.1.3 | None |
| SRR29017457 | MDR-TB | lineage1.1.3 | None |
| SRR6797842 | Sensitive | lineage1.1.3 | None |
| ERR1198979_ERR1198977_ERR1198978 | Sensitive | lineage4.6.1.2 | None |
| ERR4818202 | Sensitive | lineage1.1.3 | gb |
| SRR6650181 | Sensitive | lineage1.1.3 | None |
| ERR3275215 | RR-TB | lineage4.1.2.1 | nl |
| SRR6650329 | Sensitive | lineage1.1.3 | None |
| SRR1140580 | Sensitive | lineage4.6.1.2 | None |
| ERR11049723 | Sensitive | lineage4.1.2.1 | None |
| SRR22137437 | Sensitive | lineage1.1.3 | None |
| SRR28045029 | HR-TB | lineage1.1.2;lineage1.1.3 | None |
| ERR4821187 | Sensitive | lineage1.1.3 | None |
| SRR26112372 | Sensitive | lineage3.1.2 | None |
| ERR1198979 | Sensitive | lineage4.6.1.2 | None |
| ERR4818351 | Other | lineage1.1.3 | None |
| ERR4820717 | Other | lineage1.1.3 | None |
| SRR12634620 | Sensitive | lineage4.6.1.2 | None |
| SRR21675941 | Sensitive | lineage1.1.3 | None |
| SRR6045438 | Other | lineage1.1.3 | gb |
| ERR13291976 | Sensitive | lineage1.1.3 | None |
| SRR6797387 | Sensitive | lineage1.1.3 | None |
| ERR123930 | HR-TB | lineage1.1.3 | None |
| ERR278605 | Sensitive | lineage1.1.3 | None |
| ERR9125640 | Sensitive | lineage1.1.3 | None |
| ERR4553839 | MDR-TB | lineage1.1.3 | None |
| ERR751998 | Sensitive | lineage1.1.1 | th |
| ERR752145 | Sensitive | lineage1.1.1 | th |
| ERR751709 | Sensitive | lineage1.1.1 | th |
| ERR751749 | Sensitive | lineage1.1.1 | th |
| ERR752207 | Sensitive | lineage1.1.1 | th |
| ERR752198 | Sensitive | lineage1.1.1 | th |
| ERR752114 | RR-TB | lineage1.1.1 | th |
| ERR751750 | Sensitive | lineage1.1.1 | th |
| ERR752218 | Sensitive | lineage1.1.1 | th |
| ERR751969 | Sensitive | lineage1.1.1 | th |
| ERR718549 | Sensitive | lineage1.1.1 | th |
| ERR718202 | Sensitive | lineage1.1.1 | th |
| ERR752079 | Sensitive | lineage1.1.1 | th |
| SRR28046103 | Other | lineage1.1.3 | None |
| ERR751884 | Sensitive | lineage1.1.1 | th |
| ERR751957 | Sensitive | lineage1.1.1 | th |
| SRR28045195 | Sensitive | lineage1.1.3 | None |
| ERR752213 | Sensitive | lineage1.1.1 | th |
| SRR28044668 | Sensitive | lineage1.1.3 | None |
| SRR28044457 | Sensitive | lineage1.1.3 | None |
| ERR400500 | Sensitive | lineage4.6.1.2 | gb |
| SRR2100397 | HR-TB | lineage1.1.3 | None |
| SRR2100430 | Sensitive | lineage1.1.3 | None |
| SRR2100976 | Sensitive | lineage1.1.3 | None |
| SAMN02381039 | Sensitive | lineage4.6.1.2 | ug |
| ERR234163 | Sensitive | lineage4.6.1.2 | None |
| SRR3675559 | Sensitive | lineage1.1.3 | gb |
| SRR6797869 | Sensitive | lineage1.1.3 | None |
| SRR12882478 | Sensitive | lineage1.1.3 | None |
| SRR21689766 | Sensitive | lineage3 | None |
| ERR9285957 | Sensitive | lineage4.6.1.2 | None |
| SRR6797562 | Sensitive | lineage1.1.3 | None |
| SRR29126790 | Sensitive | lineage1.1.3 | None |
| ERR114428 | Sensitive | lineage1.1.3 | None |
| ERR1198978 | Sensitive | lineage4.6.1.2 | None |
| ERR4814843 | Other | lineage1.1.3 | None |
| ERR4553473 | MDR-TB | lineage1.1.3 | None |
| ERR4553481 | MDR-TB | lineage1.1.3 | None |
| SRR11662504 | MDR-TB | lineage2.2.1 | None |
| SRR26111949 | Sensitive | lineage1.1.3 | None |
| SRR11662200 | MDR-TB | lineage1.1.1 | None |
| ERR2514608 | Sensitive | lineage1.1.3 | gb |
| ERR4820689 | Sensitive | lineage4.1.2.1 | None |
| SRR18213805 | HR-TB | lineage1.1.3 | None |
| ERR4818392 | Sensitive | lineage1.1.3 | gb |
| SRR20969852 | MDR-TB | lineage2.2.1 | None |
| SRR21713565 | Sensitive | lineage1.1.3 | None |
| SRR6797711 | Sensitive | lineage1.1.3 | None |
| SRR21732255 | Sensitive | lineage4.6.1.2 | None |
| ERR4821078 | Other | lineage4.1.2.1 | gb |
| SRR26112143 | Sensitive | lineage1.1.3 | None |
| SRR6797388 | Sensitive | lineage1.1.3 | None |
| SRR6797534 | Sensitive | lineage1.1.3 | None |
| ERR538423 | Sensitive | lineage2.2.1 | None |
| ERR4831185 | Sensitive | lineage1.1.3 | de |
| ERR4553760 | MDR-TB | lineage1.1.3 | None |
| SRR6650286 | Sensitive | lineage1.1.3 | None |
| ERR4800602 | Sensitive | lineage1.1.3 | None |
| SRR28859622 | Sensitive | lineage1.1.3 | None |
| ERR1336825 | Sensitive | La3;M.canetti | None |
| SRR29017181 | MDR-TB | lineage1.1.3 | None |
| SRR29126976 | Sensitive | lineage1.1.3 | None |
| SRR6650253 | Sensitive | lineage1.1.3 | None |
| SRR6797329 | Sensitive | lineage1.1.3 | None |
| SRR6650173 | Sensitive | lineage1.1.3 | None |
| SRR29017049 | Pre-XDR-TB | lineage1.1.3 | None |
| ERR13291554 | Sensitive | lineage1.1.3 | None |
| SRR21686095 | Sensitive | lineage1.1.3 | None |
| ERR2513113 | HR-TB | lineage1.1.3 | gb |
| ERR13261367 | Sensitive | lineage3 | None |
| SRR6797762 | Sensitive | lineage1.1.3 | None |
| ERR8699113 | Sensitive | lineage4.3.3 | None |
| SRR21711124 | Other | lineage1.1.3 | None |
| SRR29017438 | MDR-TB | lineage1.1.3 | None |
| SRR28044899 | Sensitive | lineage1.1.3 | None |
| SRR25340784 | Sensitive | lineage1.2.1.2.1 | None |
| SRR6797672 | Sensitive | lineage1.1.3 | None |
| SRR26399950 | Sensitive | lineage1.1.3 | None |
| SRR21710723 | Sensitive | lineage1.1.3 | None |
| ERR4814768 | Other | lineage1.1.3 | None |
| SRR26112368 | Sensitive | lineage1.1.3 | None |
| ERR4816093 | Other | lineage1.1.3 | None |
| ERR751724 | Sensitive | lineage1.1.1 | th |
| ERR751730 | Sensitive | lineage1.1.1 | th |
| SRR25827678 | Sensitive | lineage1.1.3 | None |
| SRR28044288 | Sensitive | lineage1.1.3 | None |
| ERR1043163 | Other | La3;M.canetti | None |
| ERR775798 | Sensitive | lineage1.1.1 | th |
| ERR752049 | HR-TB | lineage1.1.1 | th |
| ERR718278 | Sensitive | lineage1.1.1 | th |
| ERR768006 | Sensitive | lineage1.1.1 | th |
| SRR26056463 | HR-TB | lineage1.1.3 | None |
| ERR123921 | Sensitive | lineage1.1.3 | None |
| SRR12634562 | Sensitive | lineage4.6.1.2 | None |
| ERR550820 | Sensitive | lineage4.1.2.1 | de |
| ERR11049321 | Sensitive | lineage4.7 | None |
| ERR266123 | Sensitive | M.canetti | None |
| SRR6797715 | Sensitive | lineage1.1.3 | None |
| SRR21239816 | Sensitive | lineage4.3.3 | None |
| SRR29017409 | MDR-TB | lineage1.1.3 | None |
| ERR4818125 | Sensitive | lineage1.1.3 | gb |
| ERR3273127 | MDR-TB | lineage4.3 | None |
| SRR1049728 | Sensitive | lineage4.6.1.2 | None |
| SRR6650178 | Sensitive | lineage1.1.3 | None |
| SRR6797588 | Other | lineage1.1.3 | None |
| ERR4816554 | Sensitive | lineage1.1.3 | gb |
| ERR3132237 | Sensitive | lineage1.1.3 | None |
| SAMEA3671493 | Sensitive | lineage4.6.1.2 | ug |
| SRR6797293 | Sensitive | lineage1.1.3 | None |
| SRR12634564 | Sensitive | lineage4.6.1.2 | None |
| ERR1336824 | Sensitive | La3;M.canetti | None |
| ERR4553628 | RR-TB | lineage1.1.3 | None |
| SRR6650432 | Sensitive | lineage1.1.3 | None |
| SRR6797321 | Sensitive | lineage1.1.3 | None |
| ERR4830205 | Sensitive | lineage1.1.3 | vn |
| SRR21709620 | Sensitive | lineage4.3.3 | None |
| ERR2027219 | Sensitive | lineage1.1.3 | None |
| SRR6797449 | Sensitive | lineage1.1.3 | None |
| ERR13290075 | Sensitive | lineage1.1.3 | None |
| SRR6045930 | Sensitive | lineage1.1.3 | gb |
| ERR13285311 | Sensitive | lineage3 | None |
| SRR10040192 | MDR-TB | lineage2.2.1 | None |
| ERR13291885 | Sensitive | lineage4.3.3 | None |
| SRR26056415 | Sensitive | lineage1.1.3 | None |
| SRR29055654 | Sensitive | lineage1.1.3 | None |
| SRR25827750 | Sensitive | lineage1.1.3 | None |
| ERR13292097 | Sensitive | lineage1.1.3 | None |
| ERR1198977 | Sensitive | lineage4.6.1.2 | None |
| ERR9119300 | Sensitive | lineage1.1.3 | None |
| SRR17406751 | Other | lineage1.1.3 | None |
| SRR6797870 | Sensitive | lineage1.1.3 | None |
| ERR2517489 | Sensitive | lineage4.1.2.1 | nl |
| SRR21658773 | Sensitive | lineage1.1.3 | None |
| SRR29231524 | Sensitive | lineage1.1.3;lineage4.3.3 | None |
| ERR1336820 | Sensitive | La3;M.canetti | None |
| SRR16058417 | Sensitive | lineage1.1.3 | None |
| SRR29341608 | Sensitive | lineage1.1.3 | None |
| SRR21240136 | Sensitive | lineage4.3.3 | None |
| ERR751843 | Sensitive | lineage1.1.1 | th |
| SRR1062929 | Sensitive | lineage4.6.1.2 | None |
| SRR29017704 | MDR-TB | lineage1.1.3 | None |
| ERR4796693 | Sensitive | lineage1.1.3 | in |
| SRR1049564 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None |
| SRR6797463 | Sensitive | lineage1.1.3 | None |
| SRR16058430 | Sensitive | lineage1.1.3 | None |
| ERR11067887 | Sensitive | lineage4.1.2.1 | None |
| SRR30182736 | Sensitive | lineage1.1.3 | None |
| SRR29440934 | Sensitive | lineage1.1.3.1 | None |
| ERR1336821 | Sensitive | La3;M.canetti | None |
| SRR6650142 | Sensitive | lineage1.1.3 | None |
| SRR7069523 | Other | lineage1.1.3 | None |
| SRR8237358 | Sensitive | lineage2.2.1 | None |
| SRR13180225 | Other | lineage4.1.2.1 | None |
| SRR28859938 | Sensitive | lineage1.1.3 | None |
| ERR1043164 | Other | La3;M.canetti | None |
| ERR1336826 | Sensitive | La3;M.canetti | None |
| SRR29053207 | Sensitive | lineage1.1.3 | None |
| ERR768030 | Sensitive | lineage1.1.1 | th |
| ERR718389 | Sensitive | lineage1.1.1 | th |
| ERR718538 | Sensitive | lineage1.1.1 | th |
| ERR718433 | Sensitive | lineage1.1.1 | th |
| SRR28045187 | Sensitive | lineage1.1.3 | None |
| ERR4820815 | Sensitive | lineage1.1.3 | gb |
| ERR4553782 | MDR-TB | lineage1.1.3 | None |
| ERR1336823 | Sensitive | La3;M.canetti | None |
| SRR2100161 | Sensitive | lineage1.1.3 | None |
| SRR2100277 | Sensitive | lineage1.1.3 | None |
| ERR2446118 | Other | lineage4.1.2.1 | nl |
| SRR21240186 | Sensitive | lineage4.3.3 | None |
| SRR6650405 | Sensitive | lineage1.1.3 | None |
| SRR6650417 | Other | lineage1.1.3 | None |
| ERR4553622 | RR-TB | lineage1.1.3 | None |
| SRR29017686 | MDR-TB | lineage1.1.3 | None |
| SRR6797373 | Sensitive | lineage1.1.3;lineage4.2.2.2 | None |
| SRR6797411 | HR-TB | lineage1.1.3 | None |
| SRR6797622 | Sensitive | lineage1.1.3 | None |
| SRR6650172 | Sensitive | lineage1.1.3 | None |
| ERR718499 | Sensitive | lineage1.1.1 | None |
| ERR2510661 | MDR-TB | lineage3 | it |
| ERR266126 | Sensitive | La2;M.canetti | None |
| SRR21710590 | Sensitive | lineage1.1.3 | None |
| SRR7535067 | Sensitive | lineage4.6.1.2 | None |
| SRR25827630 | Sensitive | lineage1.1.2 | None |
| SRR26056411 | Sensitive | lineage1.1.3 | None |
| SRR22137445 | HR-TB | lineage1.1.3 | None |
| ERR9125652 | Sensitive | lineage1.1.3 | None |
| ERR386964 | Sensitive | lineage1.1.3 | None |
| SRR29440937 | Sensitive | lineage1.1.3.1 | None |
| SRR6650150 | Sensitive | lineage1.1.3 | None |
| ERR11776005 | Sensitive | lineage4.1.2.1 | None |
| ERR028344 | Sensitive | lineage4.6.1.2 | None |
| ERR4821264 | Other | lineage1.1.3 | None |
| SRR16058668 | Sensitive | M.canetti | None |
| SRR6650280 | Sensitive | lineage1.1.3 | None |
| SRR6797283 | Other | lineage1.1.3 | None |
| SRR6797786 | Sensitive | lineage1.1.3 | None |
| SRR1049727 | Sensitive | lineage4.6.1.2 | None |
| ERR11068087 | Sensitive | lineage1.1.3 | None |
| SRR1049563 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None |
| SRR22251838 | Other | lineage1.1.3 | None |
| ERR13289899 | Other | lineage1.1.3 | None |
| SRR6797680 | Sensitive | lineage1.1.3 | None |
| SRR28859772 | Sensitive | lineage1.1.3 | None |
| SRR29772633 | MDR-TB | lineage3.1.2 | None |
| SRR6797533 | Sensitive | lineage1.1.3 | None |
