Rv3197A - c.250_261delGGACGTCCGCGC


Drug resistance types
77 Sensitive 5 RR-TB 13 HR-TB 47 MDR-TB 41 Pre-XDR-TB 2 XDR-TB 17 Other
lineage Counts
lineage Count
lineage2.2.1 34
lineage4.8 7
lineage4.3.4.2.1 1
lineage4;lineage3.1.1 1
lineage3 24
lineage4.1 37
lineage2.2.2 25
lineage2.2.2;lineage2.2.1 1
lineage4.1.1.3 2
lineage4.3.3 9
lineage4.6.1.1 2
lineage4.1.2.1 3
lineage4.4.1.1 4
lineage4.3.2 1
lineage1.2.2.2 2
lineage4.1.1 2
lineage4.1.2.1.1 2
lineage4.6.5 1
lineage4.3.2.1 1
lineage3;lineage2.2.1.1 1
lineage4.4.1.1;lineage4.1 1
lineage4.6.2.2 5
lineage4.1.3 1
lineage2.2 14
lineage4 3
5
lineage4.1;lineage2.2.1 1
lineage1.2.1 1
lineage4.3.4.1 1
lineage4.3.3;lineage2.2.1 1
lineage4.1.2 2
lineage2.2.1.1 1
lineage1.2.1.2.1 1
lineage4.3;lineage2.2.1 1
lineage4.2.1 1
lineage4.2.2.2 1
lineage1.1.1.1 2
spoligotype Counts
spoligotype Count
None 202
Geographic prevalence
Country level data for this variant is available for 42 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1723645 MDR-TB lineage2.2.1 cn
ERR2229011 Other lineage4.8 None
ERR216986 Sensitive lineage4.3.4.2.1 None
ERR216899 Sensitive lineage4;lineage3.1.1 None
ERR2229044 Sensitive lineage4.8 None
ERR2229593 Sensitive lineage4.8 None
ERR4818105 Sensitive lineage3 None
ERR4816804 Other lineage4.1 None
ERR2229382 Sensitive lineage4.8 None
SRR5065328 Other lineage2.2.2 vn
ERR4818367 Sensitive lineage3 None
SRR5065580 Other lineage2.2.2 vn
DRR185111 Sensitive lineage2.2.2 vn
SRR5073643 Sensitive lineage2.2.2 vn
SRR5067716 Other lineage2.2.2 vn
SRR5073809 Sensitive lineage2.2.2;lineage2.2.1 vn
ERR4819154 Sensitive lineage4.1.1.3 None
SRR5152895 Pre-XDR-TB lineage2.2.1 None
SRR5153810 HR-TB lineage4.3.3 None
ERR2514070 Other lineage3 None
ERR1199083 Sensitive lineage4.6.1.1 ug
ERR4819765 Other lineage4.1 None
ERR1199006 Sensitive lineage4.6.1.1 ug
ERR2514708 Sensitive lineage4.1.2.1 None
SAMN02419683 Sensitive lineage4.1 by
ERR234594 MDR-TB lineage4.1 ru
ERR234627 MDR-TB lineage4.1 ru
ERR4821899 Other lineage4.1 None
ERR4821938 Sensitive lineage4.4.1.1 None
ERR11067255 Sensitive lineage4.1 None
ERR4827434 HR-TB lineage2.2.1 None
ERR4827457 Sensitive lineage4.1.2.1 None
ERR4797870 Pre-XDR-TB lineage2.2.1 in
ERR2516452 Sensitive lineage4.3.2 pe
ERR2509676 Sensitive lineage3 gb
ERR4810790 Pre-XDR-TB lineage2.2.1 cn
ERR4829293 Sensitive lineage4.4.1.1 None
SRR6480565 HR-TB lineage2.2.2 None
SRR6458411 Pre-XDR-TB lineage2.2.1 None
SRR6458420 Pre-XDR-TB lineage2.2.1 None
ERR4797499 Pre-XDR-TB lineage2.2.1 in
SRR6485153 Other lineage4.3.3 None
ERR2510596 RR-TB lineage3 pk
SRR6484936 Sensitive lineage4.1 None
SRR6650151 Sensitive lineage1.2.2.2 None
ERR4829701 HR-TB lineage3 it
ERR4800209 HR-TB lineage2.2.1 in
ERR4800381 XDR-TB lineage2.2.1 in
ERR4831097 Pre-XDR-TB lineage2.2.1 None
ERR4829091 Sensitive lineage4.1 it
ERR4972539 Pre-XDR-TB lineage4.1.1 None
ERR4972513 MDR-TB lineage4.3.3 None
ERR4815137 Other lineage4.1 gb
ERR4817426 Other lineage4.1 gb
ERR5917684 Pre-XDR-TB lineage2.2.1 by
ERR4972570 MDR-TB lineage4.1.2.1.1 None
ERR4972573 MDR-TB lineage4.1.2.1.1 None
ERR4972572 MDR-TB lineage4.3.3 None
SRR6785360 Sensitive lineage4.1 None
SRR6785335 Sensitive lineage4.3.3 None
ERR4972586 Pre-XDR-TB lineage4.1.1 None
SRR6785330 Other lineage2.2.1 None
ERR2510489 RR-TB lineage4.6.5 pk
SRR6832436 Sensitive lineage4.1 None
SRR6832540 Sensitive lineage4.1 None
SRR6964537 Sensitive lineage3 None
SRR6964601 HR-TB lineage3 None
SRR6964620 Sensitive lineage3 None
ERR4829048 Pre-XDR-TB lineage3 pk
SRR6785481 Sensitive lineage4.1 None
SRR6896603 Sensitive lineage4.3.2.1 None
SRR6964572 MDR-TB lineage3 None
SRR6964641 Sensitive lineage3 None
ERR4829977 RR-TB lineage3;lineage2.2.1.1 pk
ERR4821780 HR-TB lineage2.2.2 gb
SRR7131212 Sensitive lineage4.4.1.1 None
ERR11465162 Sensitive lineage4.4.1.1;lineage4.1 None
SRR7517718 HR-TB lineage3 None
DRR034532 HR-TB lineage2.2.1 None
ERR4819832 Sensitive lineage4.6.2.2 gb
ERR11043747 Sensitive lineage4.1 None
ERR2512860 Sensitive lineage3 gb
SRR7131296 Other lineage4.3.3 None
SRR7517692 HR-TB lineage3 None
ERR4818134 Sensitive lineage4.1 gb
SRR7781511 MDR-TB lineage4.1.3 None
ERR4553579 MDR-TB lineage2.2 None
ERR4457893 Sensitive lineage4 None
ERR4553578 MDR-TB lineage2.2 None
ERR4821067 Sensitive lineage4.1 gb
ERR4553409 MDR-TB lineage4 None
ERR4553412 MDR-TB None
ERR4553496 MDR-TB None
ERR4553523 MDR-TB None
ERR4553534 MDR-TB lineage2.2 None
ERR4553659 Pre-XDR-TB lineage2.2.2 None
ERR4553603 MDR-TB lineage2.2.2 None
ERR4553615 MDR-TB None
ERR4553630 MDR-TB lineage2.2 None
ERR4553662 MDR-TB lineage2.2 None
ERR4553664 MDR-TB lineage2.2 None
ERR4553850 MDR-TB lineage2.2.2 None
ERR4553816 MDR-TB lineage2.2 None
ERR4553671 MDR-TB lineage2.2 None
ERR4553702 MDR-TB lineage2.2.2 None
ERR4553725 MDR-TB lineage2.2.2 None
ERR4553774 Pre-XDR-TB lineage2.2.2 None
ERR4553825 MDR-TB lineage2.2 None
ERR4553893 Pre-XDR-TB lineage2.2.2 None
ERR4553868 Pre-XDR-TB lineage2.2 None
ERR4553877 Pre-XDR-TB lineage2.2 None
ERR4553872 Pre-XDR-TB lineage2.2 None
ERR4553889 Pre-XDR-TB lineage2.2.2 None
ERR4553898 Pre-XDR-TB lineage2.2.2 None
ERR4553907 Pre-XDR-TB lineage2.2.2 None
ERR4553904 Pre-XDR-TB lineage2.2 None
ERR4553944 MDR-TB lineage2.2.2 None
ERR4553939 MDR-TB lineage2.2.2 None
ERR4813751 MDR-TB lineage4.1.1.3 br
ERR4627395 Sensitive None
ERR133874 Sensitive lineage4.1 ru
ERR137251 Sensitive lineage4.1 ru
ERR5918016 Pre-XDR-TB lineage2.2.1 za
ERR4799636 Pre-XDR-TB lineage2.2.1 None
ERR4831455 MDR-TB lineage3 None
ERR4831470 Pre-XDR-TB lineage3 None
ERR5918018 Pre-XDR-TB lineage2.2.1 za
ERR067732 RR-TB lineage4.1;lineage2.2.1 ru
ERR5864942 Pre-XDR-TB lineage2.2 None
ERR5864127 MDR-TB lineage2.2.1 None
ERR5864941 Pre-XDR-TB lineage2.2.1 None
ERR5908245 Sensitive lineage1.2.1 None
ERR5864943 Pre-XDR-TB lineage2.2.1 None
ERR5865589 MDR-TB lineage4.3.3 None
SRR16087913 XDR-TB lineage2.2.1 None
ERR7764386 Sensitive lineage4.3.3 None
SRR16088291 Sensitive lineage4.1 None
ERR9634292 Sensitive lineage2.2.2 None
ERR8665768 Pre-XDR-TB lineage2.2.1 None
ERR9285908 Sensitive lineage4.4.1.1 None
ERR8665770 Pre-XDR-TB lineage2.2.1 None
ERR9993237 Pre-XDR-TB lineage2.2.1 None
ERR9907692 MDR-TB lineage4.3.4.1 None
SRR10305614 MDR-TB lineage2.2.1 None
SRR10209206 Sensitive lineage2.2.2 None
SRR11444222 Sensitive lineage4.6.2.2 None
SRR11444048 Sensitive lineage4.6.2.2 None
SRR1162991 Sensitive lineage4.1 None
SRR11444275 Sensitive lineage4.6.2.2 None
SRR11444298 Sensitive lineage4.6.2.2 None
SRR11972235 MDR-TB lineage2.2.2 None
SRR1169080 Sensitive lineage4.1 None
SRR1172033 Sensitive lineage4.1 None
SRR11871414 Pre-XDR-TB lineage2.2.1 None
SRR1163357 Sensitive lineage4.1 None
SRR11871421 Pre-XDR-TB lineage2.2.1 None
SRR12882015 HR-TB lineage3 None
SRR13232400 MDR-TB lineage4.3.3;lineage2.2.1 None
SRR13232631 Other lineage4.1.2 None
SRR13232414 Sensitive lineage4.8 None
SRR13232602 Sensitive lineage2.2.1 None
SRR13232621 MDR-TB lineage2.2.1 None
SRR14088371 MDR-TB lineage3 None
SRR14088363 HR-TB lineage3 None
SRR14088391 Pre-XDR-TB lineage3 None
SRR16156718 Pre-XDR-TB lineage4.3.3 None
SRR14088395 MDR-TB lineage3 None
SRR16096975 Sensitive lineage4 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR17856666 Sensitive lineage3 None
SRR19303789 Sensitive lineage4.1 None
SRR19303948 Sensitive lineage4.8 None
SRR11662402 Pre-XDR-TB lineage2.2.1.1 None
SRR18715110 Sensitive lineage4.1 None
SRR18715339 Pre-XDR-TB lineage2.2.1 None
SRR19303894 Other lineage1.2.1.2.1 None
SRR19303911 Sensitive lineage4.1 None
SRR19304013 Sensitive lineage4.1 None
SRR21747011 RR-TB lineage2.2.2 None
SRR20969426 Pre-XDR-TB lineage2.2.2 None
SRR20969645 Pre-XDR-TB lineage2.2.2 None
SRR25827802 Pre-XDR-TB lineage4.3;lineage2.2.1 None
SRR21678366 Other lineage1.2.2.2 None
SRR22048414 Sensitive lineage4.1 None
ERR11068876 MDR-TB lineage2.2.1 None
SRR22048472 Sensitive lineage4.1 None
ERR4814554 Other lineage4.1 None
ERR11069110 MDR-TB lineage4.2.1 None
ERR11081750 Sensitive lineage4.1 None
ERR11082116 MDR-TB lineage4.2.2.2 None
SRR24222968 Sensitive lineage4.1 None
SRR26936972 MDR-TB lineage1.1.1.1 None
SRR22250097 HR-TB lineage1.1.1.1 None
ERR7363096 Sensitive lineage4.1.2.1 None
ERR7363059 Sensitive lineage4.1.2 None
ERR7363061 Sensitive lineage4.8 None
SRR27450303 Sensitive lineage3 None
ERR4815645 Sensitive lineage4.1 None
ERR4814417 Sensitive lineage4.1 None
SRR6824578 MDR-TB lineage2.2.1 cn
SRR6824468 MDR-TB lineage2.2.1 cn
ERR2041793 MDR-TB lineage4.1 rs