Rv3197A - c.250_261delGGACGTCCGCGC


Drug resistance types
60 Sensitive 7 RR-TB 8 HR-TB 59 MDR-TB 48 Pre-XDR-TB 8 XDR-TB 10 Other
lineage Counts
lineage Count
lineage2.2.2 47
lineage4.1 42
lineage2.2.1 34
lineage3 21
lineage4.3.3 4
lineage2.2.1;lineage4.3 1
lineage2.2.1.1;lineage3 1
lineage3.1 1
lineage4.1.1.2 2
lineage1.1.3.1 2
lineage2.2 16
lineage1.1.1.1 2
lineage2.2.1.2 1
lineage4.3.2 1
lineage4 2
lineage4.6.2.2 4
lineage1.2.2.2 5
lineage2.2.1.1 3
lineage4.1;lineage4.4.1.1 1
lineage2.2.1;lineage2.2.2 1
lineage4.6.1.1 2
1
lineage4.6.5 2
lineage1.2.2.2;lineage4 1
lineage2.2.1;lineage4.1 1
lineage4.2.1 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 200
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5065580 Other lineage2.2.2 vn
ERR11067255 Sensitive lineage4.1 None
ERR4831097 Pre-XDR-TB lineage2.2.1 None
SRR7517692 HR-TB lineage3 None
SRR16156718 Pre-XDR-TB lineage4.3.3 None
SRR17856666 Sensitive lineage3 None
ERR13194019 Pre-XDR-TB lineage2.2.2 None
ERR4831470 Pre-XDR-TB lineage3 None
SRR25827802 Pre-XDR-TB lineage2.2.1;lineage4.3 None
SRR24222968 Sensitive lineage4.1 None
ERR4829977 RR-TB lineage2.2.1.1;lineage3 pk
SRR29017142 MDR-TB lineage2.2.2 None
SRR28045962 Sensitive lineage2.2.2 None
ERR11773727 Pre-XDR-TB lineage4.3.3 None
ERR4829048 Pre-XDR-TB lineage3 pk
SRR29017045 Pre-XDR-TB lineage2.2.2 None
SRR29126242 Sensitive lineage4.1 None
SRR30182593 Sensitive lineage3.1 None
SRR4423148 Pre-XDR-TB lineage2.2.2 None
SRR12882015 HR-TB lineage3 None
ERR4972586 Pre-XDR-TB lineage4.1.1.2 None
SRR28351475 Pre-XDR-TB lineage2.2.1 None
ERR4797499 Pre-XDR-TB lineage2.2.1 in
SRR29093370 MDR-TB lineage2.2.2 None
ERR4829701 HR-TB lineage3 it
SRR29017395 MDR-TB lineage2.2.2 None
SRR29017383 MDR-TB lineage2.2.2 None
SRR29017417 MDR-TB lineage2.2.2 None
SRR28045256 RR-TB lineage2.2.2 None
SRR14088391 Pre-XDR-TB lineage3 None
SRR29017433 MDR-TB lineage1.1.3.1 None
SRR5067716 Other lineage2.2.2 vn
SRR18715110 Sensitive lineage4.1 None
SRR4423174 Pre-XDR-TB lineage2.2.2 None
ERR2509676 Sensitive lineage3 gb
ERR4553904 Pre-XDR-TB lineage2.2 None
SRR10209206 Sensitive lineage2.2.2 None
ERR5865588 MDR-TB lineage4.3.3 None
SRR10040353 MDR-TB lineage2.2.2 None
SRR26936972 MDR-TB lineage1.1.1.1 None
SRR6964601 HR-TB lineage3 None
SRR29017176 MDR-TB lineage2.2.2 None
ERR4818134 Sensitive lineage4.1 gb
SRR18715339 Pre-XDR-TB lineage2.2.1 None
ERR13245559 Pre-XDR-TB lineage2.2.2 None
SRR6964620 Sensitive lineage3 None
SRR25827328 Pre-XDR-TB lineage2.2.1.2 None
ERR2512860 Sensitive lineage3 gb
ERR4553579 MDR-TB lineage2.2.2 None
ERR5918016 XDR-TB lineage2.2.1 za
SRR14088363 Sensitive lineage3 None
SRR6832540 Sensitive lineage4.1 None
SRR6964572 MDR-TB lineage3 None
ERR4814417 Sensitive lineage4.1 None
ERR2516452 Sensitive lineage4.3.2 pe
ERR4553578 MDR-TB lineage2.2.2 None
SRR4423139 Pre-XDR-TB lineage2.2.2 None
ERR4553662 MDR-TB lineage2.2 None
ERR4457893 Sensitive lineage4 None
SRR27450303 Sensitive lineage3 None
SRR6824468 MDR-TB lineage2.2.1 cn
ERR11068876 MDR-TB lineage2.2.1 None
ERR4797870 Pre-XDR-TB lineage2.2.1 in
DRR185111 Sensitive lineage2.2.2 vn
SRR11444298 Sensitive lineage4.6.2.2 None
ERR4553496 MDR-TB lineage1.2.2.2 None
ERR4553939 MDR-TB lineage2.2.2 None
SRR11871421 Pre-XDR-TB lineage2.2.1 None
ERR2510596 RR-TB lineage3 pk
SRR28868439 Sensitive lineage3 None
ERR4553603 MDR-TB lineage2.2 None
SRR16088291 Sensitive lineage4.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1723647 MDR-TB lineage2.2.1 None
ERR4818367 Sensitive lineage3 None
SRR6458420 Pre-XDR-TB lineage2.2.1 None
SRR28646102 Sensitive lineage4.1 None
SRR28046072 Pre-XDR-TB lineage2.2.1.1 None
SRR6964537 Sensitive lineage3 None
ERR2041793 MDR-TB lineage4.1 rs
ERR4821780 HR-TB lineage2.2.2 gb
SRR28868625 Sensitive lineage2.2.2 None
SRR29016888 MDR-TB lineage2.2.2 None
ERR552158 Pre-XDR-TB lineage2.2.2 None
SRR7070528 Sensitive lineage3 None
ERR13194076 Pre-XDR-TB lineage2.2.2 None
SRR20969426 Pre-XDR-TB lineage2.2.2 None
ERR4553889 Pre-XDR-TB lineage2.2 None
SRR29016870 MDR-TB lineage1.2.2.2 None
SRR6824578 MDR-TB lineage2.2.1 cn
ERR4972539 Pre-XDR-TB lineage4.1.1.2 None
ERR4553725 MDR-TB lineage2.2 None
ERR5864943 Pre-XDR-TB lineage2.2.1 None
SAMN02419683 Sensitive lineage4.1 by
SAMN03246387 MDR-TB lineage2.2.1 None
SRR6832436 Sensitive lineage4.1 None
SRR22048414 Sensitive lineage4.1 None
ERR13267005 XDR-TB lineage2.2.1 None
ERR4553534 MDR-TB lineage2.2.2 None
ERR13194009 Pre-XDR-TB lineage2.2.2 None
ERR4799636 Pre-XDR-TB lineage2.2.1 None
SRR11444048 Sensitive lineage4.6.2.2 None
SRR11444275 Sensitive lineage4.6.2.2 None
ERR133874 Sensitive lineage4.1 ru
SRR6785481 Sensitive lineage4.1 None
SRR25206962 Pre-XDR-TB lineage2.2.1 None
ERR11465162 Sensitive lineage4.1;lineage4.4.1.1 None
ERR8665770 Pre-XDR-TB lineage2.2.1 None
ERR5864941 Pre-XDR-TB lineage2.2.1 None
ERR4553630 MDR-TB lineage2.2 None
ERR4553898 MDR-TB lineage2.2.2 None
SRR1169080 Sensitive lineage4.1 None
SRR25827315 Pre-XDR-TB lineage2.2.1.1 None
SRR4423153 Pre-XDR-TB lineage2.2.2 None
SRR11871414 XDR-TB lineage2.2.1 None
ERR4553702 MDR-TB lineage2.2 None
ERR4821899 Other lineage4.1 None
ERR4831455 MDR-TB lineage3 None
SRR16096975 Other lineage4 None
ERR11043747 Sensitive lineage4.1 None
SRR5073643 Sensitive lineage2.2.2 vn
SRR5073809 Sensitive lineage2.2.1;lineage2.2.2 vn
SRR5153810 MDR-TB lineage4.3.3 None
ERR5864942 Pre-XDR-TB lineage2.2 None
SRR1162991 Sensitive lineage4.1 None
ERR11081750 Sensitive lineage4.1 None
ERR8665768 Pre-XDR-TB lineage2.2.1 None
ERR4800209 HR-TB lineage2.2.1 in
SRR1723645 MDR-TB lineage2.2.1 cn
SRR1723646 MDR-TB lineage2.2.1 None
SRR16087913 XDR-TB lineage2.2.1 None
ERR1199083 Sensitive lineage4.6.1.1 ug
SRR1172033 Sensitive lineage4.1 None
ERR4553659 MDR-TB lineage2.2 None
ERR4553825 MDR-TB lineage2.2 None
ERR234594 MDR-TB lineage4.1 ru
ERR4810790 Pre-XDR-TB lineage2.2.1 cn
SRR22048472 Sensitive lineage4.1 None
SRR21689442 MDR-TB lineage4.1 None
ERR4553412 MDR-TB None
SRR11662402 Pre-XDR-TB lineage2.2.1.1 None
ERR2510489 RR-TB lineage4.6.5 pk
SRR6480565 HR-TB lineage2.2.2 None
ERR4815137 Other lineage4.1 gb
SRR20969645 Pre-XDR-TB lineage2.2.2 None
ERR9634292 Sensitive lineage2.2.2 None
SRR21678366 Other lineage1.2.2.2 None
SRR6650151 Sensitive lineage1.2.2.2 None
ERR4814554 Sensitive lineage4.1 None
ERR13285679 MDR-TB lineage4.1 None
ERR4553409 MDR-TB lineage1.2.2.2;lineage4 None
ERR9993237 XDR-TB lineage2.2.1 None
SRR4423146 Pre-XDR-TB lineage2.2.2 None
SRR29356659 Sensitive lineage4.1 None
ERR234627 MDR-TB lineage4.1 ru
SRR19303789 Sensitive lineage4.1 None
ERR4816804 Other lineage4.1 None
ERR067732 RR-TB lineage2.2.1;lineage4.1 ru
SRR19303911 Sensitive lineage4.1 None
ERR4553850 MDR-TB lineage2.2 None
SRR29017122 MDR-TB lineage2.2.2 None
ERR4819765 Other lineage4.1 None
ERR4553671 MDR-TB lineage2.2 None
ERR4553893 Pre-XDR-TB lineage2.2 None
SRR5152895 Pre-XDR-TB lineage2.2.1 None
ERR4829091 Sensitive lineage4.1 it
ERR2041792 MDR-TB lineage4.1 None
ERR11069110 MDR-TB lineage4.2.1 None
SRR6785360 Sensitive lineage4.1 None
SRR10305614 MDR-TB lineage2.2.1 None
SRR6458411 Pre-XDR-TB lineage2.2.1 None
ERR552157 Pre-XDR-TB lineage2.2.2 None
ERR4553523 MDR-TB lineage1.2.2.2 None
SRR22250097 HR-TB lineage1.1.1.1 None
ERR4553872 MDR-TB lineage2.2.2 None
SRR11444222 Sensitive lineage4.6.2.2 None
ERR4553664 MDR-TB lineage2.2 None
SRR11972235 MDR-TB lineage2.2.2 None
ERR4553944 MDR-TB lineage2.2.2 None
ERR4553774 Pre-XDR-TB lineage2.2 None
ERR4553877 MDR-TB lineage2.2.2 None
ERR5918018 XDR-TB lineage2.2.1 za
ERR5917684 Pre-XDR-TB lineage2.2.1 by
ERR4800381 XDR-TB lineage2.2.1 in
ERR4553868 MDR-TB lineage2.2 None
SRR6964641 Sensitive lineage3 None
ERR4821067 Sensitive lineage4.1 gb
SRR19304013 Sensitive lineage4.1 None
SRR21747011 RR-TB lineage2.2.2 None
SRR21690332 Sensitive lineage4.1 None
ERR1199006 Sensitive lineage4.6.1.1 ug
SRR6484936 Sensitive lineage4.1 None
ERR4553615 MDR-TB lineage1.1.3.1 None
SRR29017412 MDR-TB lineage2.2.2 None
ERR4817426 Other lineage4.1 gb
ERR4813751 MDR-TB lineage4.1.1.3 br
ERR13267489 RR-TB lineage4.6.5 None
ERR137251 Sensitive lineage4.1 ru
SRR5065328 Other lineage2.2.2 vn
ERR13193980 XDR-TB lineage2.2.2 None