Rv3794 - c.-11C>A


Drug resistance types
0 Sensitive 9 RR-TB 12 HR-TB 193 MDR-TB 317 Pre-XDR-TB 41 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 305
lineage4.8 9
lineage4.1.1.2 2
lineage4.3.4.2 72
lineage4.6.1.2 6
lineage4.1.2.1 52
lineage2.2.1;lineage4 4
lineage4.1.1.3 8
lineage4.6.2.2 4
lineage4.1.2 3
lineage4.7 2
lineage4.2.1.1 1
lineage2.2.1;lineage4.8 1
lineage3.1 1
lineage3 21
lineage2.2.1;lineage3 7
lineage2.1 3
2
lineage4.1.1.1 3
lineage4.2.1 3
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.2.2 2
lineage4.4.1 1
lineage4.2.2.2 2
lineage4.4.1.1.1 1
lineage4.4.1.1 3
lineage4.3.4.2.1 4
lineage3.1.1 1
lineage4.1.1 2
lineage2.2.1.1 11
lineage2.2.1.2 2
lineage4.8.1 2
lineage4 1
lineage2.2.1;lineage4.3.3 1
lineage2.2.1;lineage4.4.2 1
lineage4.3.2 2
lineage4.3.4.1 2
lineage2.2.2 3
lineage4.4.1.2;lineage4.8 1
lineage2.2.1;lineage4.3 2
lineage4.3.3 8
lineage2.2.1;lineage3;lineage4 1
lineage2.2.1;lineage4.1.1.3 1
lineage1.2.2.2;lineage3 1
lineage5.2 2
lineage3.1.2.1 1
lineage2.2 1
lineage4.4.2 1
lineage3;lineage4.8 1
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 572
Geographic prevalence
Country level data for this variant is available for 235 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4796471 Pre-XDR-TB lineage2.2.1 in
ERR4797592 MDR-TB lineage2.2.1 in
ERR4797007 Pre-XDR-TB lineage2.2.1 in
ERR4799088 Pre-XDR-TB lineage2.2.1 in
ERR4797457 XDR-TB lineage4.8 in
ERR4796697 Pre-XDR-TB lineage2.2.1 in
ERR4799823 Pre-XDR-TB lineage2.2.1 in
SRR10305978 Pre-XDR-TB lineage2.2.1 None
ERR4799715 Pre-XDR-TB lineage2.2.1 in
ERR4796438 Pre-XDR-TB lineage2.2.1 in
ERR4972539 Pre-XDR-TB lineage4.1.1.2 None
ERR4553621 MDR-TB lineage4.3.4.2 None
ERR1035222 XDR-TB lineage4.3.4.2 pt
ERR4799271 Pre-XDR-TB lineage2.2.1 in
SRR25827746 Pre-XDR-TB lineage2.2.1 None
ERR4800241 Pre-XDR-TB lineage2.2.1 in
ERR4796742 Pre-XDR-TB lineage2.2.1 in
ERR1664639 XDR-TB lineage4.3.4.2 None
ERR1199100 RR-TB lineage4.6.1.2 cd
SRR25827291 Pre-XDR-TB lineage2.2.1 None
ERR4800555 Pre-XDR-TB lineage2.2.1 in
ERR550654 MDR-TB lineage4.1.2.1 None
SRR25827624 XDR-TB lineage2.2.1;lineage4 None
SRR22424924 Pre-XDR-TB lineage2.2.1 None
ERR2184235 MDR-TB lineage2.2.1 pe
ERR4799028 Pre-XDR-TB lineage2.2.1 in
SRR25827476 Pre-XDR-TB lineage2.2.1 None
ERR4827969 MDR-TB lineage2.2.1 None
ERR552303 MDR-TB lineage4.1.2.1 None
SRR7069187 MDR-TB lineage2.2.1 None
ERR11488548 Pre-XDR-TB lineage4.1.1.3 None
ERR4872126 MDR-TB lineage4.6.2.2 None
ERR5864816 Pre-XDR-TB lineage2.2.1 None
ERR4797582 Pre-XDR-TB lineage2.2.1 in
ERR1036274 Pre-XDR-TB lineage4.3.4.2 pt
ERR11488659 MDR-TB lineage4.1.2 None
ERR4798840 Pre-XDR-TB lineage2.2.1 None
ERR11082230 MDR-TB lineage4.7 None
SRR14801814 MDR-TB lineage4.2.1.1 None
ERR4831004 Pre-XDR-TB lineage2.2.1 np
SRR25827607 Pre-XDR-TB lineage2.2.1;lineage4.8 None
ERR4553455 MDR-TB lineage3.1 None
ERR1034889 Pre-XDR-TB lineage4.3.4.2 pt
SRR26558644 MDR-TB lineage2.2.1 None
ERR4797304 Pre-XDR-TB lineage2.2.1 in
ERR4831470 Pre-XDR-TB lineage3 None
ERR4800230 Pre-XDR-TB lineage2.2.1 in
SRR25827545 XDR-TB lineage2.2.1 None
ERR4796738 Pre-XDR-TB lineage2.2.1 in
ERR4800573 Pre-XDR-TB lineage2.2.1 in
ERR4800612 Pre-XDR-TB lineage2.2.1 None
ERR2864241 XDR-TB lineage4.3.4.2 pt
SRR6797556 Pre-XDR-TB lineage2.2.1 None
SRR22175252 HR-TB lineage2.2.1 None
ERR4800034 Pre-XDR-TB lineage2.2.1 in
ERR3509853 MDR-TB lineage2.2.1 None
SRR9613553 MDR-TB lineage4.8 None
ERR1664662 XDR-TB lineage4.3.4.2 None
ERR2707074 RR-TB lineage4.6.1.2 cd
ERR1034884 XDR-TB lineage4.3.4.2 pt
ERR4797317 Pre-XDR-TB lineage2.2.1 in
ERR11069092 MDR-TB lineage4.1.2.1 None
ERR11488448 HR-TB lineage4.1.2 None
ERR4798079 Pre-XDR-TB lineage2.2.1 in
SRR25827643 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR28351578 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR28393952 MDR-TB lineage4.1.2.1 None
SRR28393360 MDR-TB lineage4.1.2.1 None
SRR10040460 Pre-XDR-TB lineage2.1 None
SRR28044927 Pre-XDR-TB lineage2.2.1 None
SRR25207388 Pre-XDR-TB lineage2.2.1 None
SRR27069446 Pre-XDR-TB lineage2.2.1 None
SRR28351351 Pre-XDR-TB lineage2.2.1 None
SRR28351311 Pre-XDR-TB lineage2.2.1 None
SRR28351481 Pre-XDR-TB lineage2.2.1 None
SRR28351569 Pre-XDR-TB lineage2.2.1 None
SRR28351487 Pre-XDR-TB lineage2.2.1 None
SRR28044925 Pre-XDR-TB lineage2.2.1 None
SRR28351486 Pre-XDR-TB lineage2.2.1 None
SRR28045458 Pre-XDR-TB lineage2.2.1 None
SRR28706450 MDR-TB lineage2.2.1 None
ERR4553724 Pre-XDR-TB None
ERR2510421 Pre-XDR-TB lineage4.1.1.1 pk
ERR2510521 MDR-TB lineage3 pk
SRR16370509 MDR-TB lineage4.1.2.1 None
ERR4798052 Pre-XDR-TB lineage2.2.1 in
ERR552700 MDR-TB lineage4.1.2.1 None
SRR25827882 Pre-XDR-TB lineage2.2.1 None
SRR1723738 MDR-TB lineage2.2.1 None
SRR25827815 Pre-XDR-TB lineage2.2.1 None
ERR1815551 Pre-XDR-TB lineage4.3.4.2 None
ERR8774401 MDR-TB lineage4.3.4.2 None
ERR1664621 Pre-XDR-TB lineage4.3.4.2 None
SAMN02403630 MDR-TB lineage4.1.2.1 za
SRR10808411 MDR-TB lineage2.2.1 None
SRR25827388 Pre-XDR-TB lineage2.2.1 None
ERR4800593 Pre-XDR-TB lineage2.2.1 in
SRR7645920 Pre-XDR-TB lineage4.2.1 None
ERR1035235 Pre-XDR-TB lineage4.3.4.2 pt
ERR552792 MDR-TB lineage4.1.2.1 None
ERR275182 Pre-XDR-TB lineage4.3.4.2 pt
ERR1034871 XDR-TB lineage4.3.4.2 pt
ERR4799779 Pre-XDR-TB lineage2.2.1 None
SRR15014685 Pre-XDR-TB lineage2.2.1 None
ERR4798475 Pre-XDR-TB lineage2.2.1 in
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR552195 MDR-TB lineage4.1.2.1 None
ERR1815552 Pre-XDR-TB lineage4.3.4.2 None
ERR11082316 Pre-XDR-TB lineage2.2.1 None
ERR4799480 Pre-XDR-TB lineage2.2.1 in
SRR11349188 MDR-TB lineage4.1.2.1 None
SRR27450036 MDR-TB lineage2.2.1 None
SRR11662312 MDR-TB lineage4.2.2 None
ERR4813875 MDR-TB lineage4.4.1 None
ERR4800426 Pre-XDR-TB lineage2.2.1 in
SRR25827569 Pre-XDR-TB lineage2.2.1 None
ERR4798087 Pre-XDR-TB lineage2.2.1 in
ERR4799648 Pre-XDR-TB lineage2.2.1 in
ERR550874 MDR-TB lineage4.1.2.1 None
SRR25827720 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR4797776 Pre-XDR-TB lineage2.2.1 in
ERR4797682 Pre-XDR-TB lineage2.2.1 in
ERR11488345 MDR-TB lineage4.1.1.3 None
ERR4799406 Pre-XDR-TB lineage2.2.1 in
ERR1034813 Pre-XDR-TB lineage4.3.4.2 pt
SRR1723441 Pre-XDR-TB lineage2.2.1 cn
ERR9119487 MDR-TB lineage4.2.2.2 None
ERR2307379 Pre-XDR-TB lineage2.2.1 None
SRR11349137 RR-TB lineage4.4.1.1.1 None
ERR2653195 Pre-XDR-TB lineage4.4.1.1 None
ERR4810843 RR-TB lineage2.2.1 cn
SRR26331599 MDR-TB lineage4.4.1.1 None
ERR11488343 Pre-XDR-TB lineage4.1.1.3 None
ERR4799119 Pre-XDR-TB lineage2.2.1 None
ERR1034895 Pre-XDR-TB lineage4.3.4.2 pt
SRR6914121 Pre-XDR-TB lineage2.2.1 None
ERR11050149 MDR-TB lineage4.1.2.1 None
ERR4800071 Pre-XDR-TB lineage2.2.1 in
ERR5865597 MDR-TB lineage2.2.1 None
SRR1175522 MDR-TB lineage4.1.2.1 None
SRR25827513 XDR-TB lineage2.2.1;lineage3 None
SRR8365896 MDR-TB lineage2.2.1 None
ERR4872088 MDR-TB lineage4.6.2.2 None
SAMN02403629 MDR-TB lineage4.1.2.1 za
ERR2516825 Pre-XDR-TB lineage2.2.1 gb
ERR3509860 Pre-XDR-TB lineage4.3.4.2.1 None
ERR1034868 Pre-XDR-TB lineage4.3.4.2 pt
ERR9119533 MDR-TB lineage4.1.2.1 None
ERR1036283 Pre-XDR-TB lineage4.3.4.2 pt
SRR17163497 MDR-TB lineage3.1.1 None
ERR4799162 Pre-XDR-TB lineage2.2.1 None
SRR11972419 MDR-TB lineage2.2.1 None
ERR4798499 Pre-XDR-TB lineage2.2.1 in
ERR4797485 Pre-XDR-TB lineage2.2.1 in
SRR11662548 MDR-TB lineage2.2.1 None
ERR4799298 Pre-XDR-TB lineage2.2.1 in
SRR25827642 MDR-TB lineage2.2.1 None
ERR4798733 Pre-XDR-TB lineage2.2.1 in
SRR10305658 XDR-TB lineage2.2.1 None
SRR25827641 XDR-TB lineage2.2.1;lineage4 None
ERR4799899 Pre-XDR-TB lineage2.2.1 in
ERR1227528 Pre-XDR-TB lineage4.3.4.2 None
ERR4799474 Pre-XDR-TB lineage2.2.1;lineage3 in
ERR1035175 Pre-XDR-TB lineage4.3.4.2 pt
ERR7911511 MDR-TB lineage2.2.1 vn
ERR275191 Pre-XDR-TB lineage4.3.4.2 pt
SRR7585401 Pre-XDR-TB lineage2.2.1 in
ERR11050304 MDR-TB lineage4.3.4.2 None
SRR20139561 RR-TB lineage4.1.2.1 None
ERR10680037 MDR-TB lineage4.3.4.2 None
ERR2653209 Pre-XDR-TB lineage4.1.2.1 None
ERR4799957 Pre-XDR-TB lineage2.2.1 in
ERR4799044 Pre-XDR-TB lineage2.2.1 in
ERR4798785 Pre-XDR-TB lineage2.2.1 in
ERR4796647 Pre-XDR-TB lineage2.2.1 in
ERR5865596 MDR-TB lineage2.2.1 None
ERR1036290 Pre-XDR-TB lineage4.3.4.2 pt
ERR8665850 MDR-TB lineage2.2.1 None
ERR4797652 Pre-XDR-TB lineage2.2.1 in
SRR7657758 HR-TB lineage4.8 None
ERR4797759 Pre-XDR-TB lineage2.2.1 in
SRR3105779 HR-TB lineage3 None
ERR1664640 XDR-TB lineage4.3.4.2 None
SRR10305626 MDR-TB lineage2.2.1 None
ERR2184306 MDR-TB lineage4.1.1 pe
ERR5866175 MDR-TB lineage2.2.1 None
SRR25827419 Pre-XDR-TB lineage3 None
ERR1664652 XDR-TB lineage4.3.4.2 None
DRR130114 Pre-XDR-TB lineage2.2.1 None
SRR16058224 MDR-TB lineage3 None
ERR4796789 Pre-XDR-TB lineage2.2.1 in
ERR1654678 RR-TB lineage4.6.1.2 None
SRR25827877 Pre-XDR-TB lineage2.2.1 None
ERR751390 MDR-TB lineage2.2.1 pe
ERR3509863 Pre-XDR-TB lineage2.2.1 None
SRR21576642 MDR-TB lineage2.2.1 None
SRR22175246 Pre-XDR-TB lineage2.2.1 None
ERR4799679 Pre-XDR-TB lineage2.2.1 in
ERR275230 XDR-TB lineage4.3.4.2 pt
SRR1175483 MDR-TB lineage4.1.2.1 None
ERR4797180 XDR-TB lineage2.2.1 in
ERR983231 MDR-TB lineage2.2.1.1 None
SRR5709922 MDR-TB lineage2.2.1.1 th
ERR4830107 MDR-TB lineage2.2.1 tj
SRR25827390 Pre-XDR-TB lineage2.2.1.2 None
ERR3794360 MDR-TB lineage2.2.1 None
ERR2864280 Pre-XDR-TB lineage4.3.4.2 pt
ERR4798403 Pre-XDR-TB lineage2.2.1 in
SRR22175221 XDR-TB lineage2.2.1 None
ERR9907755 Pre-XDR-TB lineage4.8.1 None
ERR6358715 MDR-TB lineage4.6.1.2 None
ERR4796897 Pre-XDR-TB lineage2.2.1 in
ERR1199130 MDR-TB lineage4.6.1.2 None
ERR4797152 Pre-XDR-TB lineage2.2.1 in
ERR4798392 Pre-XDR-TB lineage4.8 in
ERR4798931 Pre-XDR-TB lineage2.2.1 in
ERR4799453 Pre-XDR-TB lineage2.2.1 in
ERR4798073 Pre-XDR-TB lineage2.2.1 in
SRR25827761 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR6824291 Pre-XDR-TB lineage2.2.1 cn
ERR4799603 Pre-XDR-TB lineage2.2.1 in
ERR4800549 Pre-XDR-TB lineage2.2.1 in
SRR1723505 MDR-TB lineage2.2.1 None
ERR4796851 Pre-XDR-TB lineage2.2.1 in
SRR1175480 MDR-TB lineage4.1.2.1 None
SRR28239704 MDR-TB lineage4.1.2.1 None
SRR28394125 MDR-TB lineage4.1.2.1 None
SRR28351170 Pre-XDR-TB lineage2.2.1 None
SRR28045389 Pre-XDR-TB lineage2.2.1 None
SRR28046240 Pre-XDR-TB lineage2.2.1 None
SRR28045817 Pre-XDR-TB lineage2.2.1 None
SRR28045456 Pre-XDR-TB lineage2.2.1 None
ERR4553803 Pre-XDR-TB None
SRR28435000 Pre-XDR-TB lineage2.2.1 None
SRR28351256 Pre-XDR-TB lineage2.2.1 None
SRR28394190 MDR-TB lineage4 None
SRR28351584 HR-TB lineage2.2.1 None
SRR28045654 Pre-XDR-TB lineage2.2.1 None
ERR2510274 Pre-XDR-TB lineage3 pk
ERR2510296 Pre-XDR-TB lineage3 pk
ERR4797876 Pre-XDR-TB lineage2.2.1 in
ERR4797373 MDR-TB lineage2.2.1 in
ERR4798766 Pre-XDR-TB lineage2.2.1 in
ERR4797295 Pre-XDR-TB lineage2.2.1 in
ERR4797783 Pre-XDR-TB lineage2.2.1 in
ERR553315 MDR-TB lineage4.1.2.1 None
ERR11082922 MDR-TB lineage4.8 None
ERR4798561 Pre-XDR-TB lineage2.2.1 in
ERR4797499 Pre-XDR-TB lineage2.2.1 in
ERR553094 MDR-TB lineage4.1.2.1 None
ERR4797787 Pre-XDR-TB lineage2.2.1;lineage4.3.3 in
ERR4872079 MDR-TB lineage4.1.2.1 None
ERR4799456 Pre-XDR-TB lineage2.2.1 in
ERR4797995 Pre-XDR-TB lineage2.2.1 in
SRR21747040 MDR-TB lineage2.2.1 None
SRR8422493 MDR-TB lineage2.2.1 None
ERR4797988 Pre-XDR-TB lineage2.2.1 in
ERR5866174 MDR-TB lineage2.2.1 None
SRR921503 Pre-XDR-TB lineage2.2.1;lineage4.4.2 None
ERR1035215 XDR-TB lineage4.3.4.2 pt
ERR4816835 MDR-TB lineage2.2.1 None
ERR4798534 Pre-XDR-TB lineage2.2.1 in
SRR10808331 MDR-TB lineage4.1.1 None
ERR4796487 Pre-XDR-TB lineage2.2.1 None
ERR751700 MDR-TB lineage2.2.1 th
SRR9224938 MDR-TB lineage4.3.2 None
ERR9119647 MDR-TB lineage4.1.2.1 None
SRR16088323 Pre-XDR-TB lineage2.2.1 None
ERR4798656 Pre-XDR-TB lineage2.2.1 in
ERR1664656 Pre-XDR-TB lineage4.3.4.2 None
ERR2516975 MDR-TB lineage4.1.2.1 gb
ERR8773968 HR-TB lineage2.2.1 None
ERR2864217 MDR-TB lineage4.3.4.1 pt
ERR4829976 Pre-XDR-TB lineage3 None
ERR4800187 Pre-XDR-TB lineage2.2.1 in
ERR4813840 HR-TB lineage4.3.4.2 None
SRR11662499 MDR-TB lineage4.2.2 None
SRR25827546 Pre-XDR-TB lineage2.2.1 None
ERR1664636 XDR-TB lineage4.3.4.2 None
ERR5865306 MDR-TB lineage2.2.1 None
SRR25827430 Pre-XDR-TB lineage2.2.1;lineage4 None
ERR5865917 MDR-TB lineage2.2.1 None
SRR24828599 XDR-TB lineage2.2.1 None
SRR22175185 HR-TB lineage2.2.1 None
ERR4799850 Pre-XDR-TB lineage2.2.1 in
ERR552196 MDR-TB lineage4.1.2.1 None
SRR6824341 MDR-TB lineage2.2.1 cn
ERR4423720 MDR-TB lineage4.3.4.2 None
SRR25827793 Pre-XDR-TB lineage2.2.1 None
ERR4797870 Pre-XDR-TB lineage2.2.1 in
ERR4553898 MDR-TB lineage2.2.2 None
SRR25827584 Pre-XDR-TB lineage4.4.1.2;lineage4.8 None
ERR3509870 Pre-XDR-TB lineage2.2.1 None
ERR1034890 Pre-XDR-TB lineage4.3.4.2 pt
ERR9119494 MDR-TB lineage4.6.2.2 None
ERR4800219 Pre-XDR-TB lineage2.2.1 in
ERR1034846 Pre-XDR-TB lineage4.3.4.2 pt
SRR8422960 MDR-TB lineage2.2.1 None
ERR4829866 Pre-XDR-TB lineage4.8 it
ERR4800564 Pre-XDR-TB lineage2.2.1 in
ERR4830743 Pre-XDR-TB lineage4.1.2 dz
SRR17856656 HR-TB lineage2.2.1.1 None
SRR786502 RR-TB lineage3 None
ERR4797507 Pre-XDR-TB lineage2.2.1 in
SRR21576582 MDR-TB lineage2.1 None
ERR4800574 Pre-XDR-TB lineage2.2.1 in
SRR21279414 Pre-XDR-TB lineage2.2.2 None
SRR25827802 Pre-XDR-TB lineage2.2.1;lineage4.3 None
ERR4796983 Pre-XDR-TB lineage2.2.1 in
SRR6511619 MDR-TB lineage4.3.4.1 None
ERR4831893 MDR-TB lineage2.2.1.1 vn
ERR4797740 Pre-XDR-TB lineage2.2.1 in
SRR5341283 Pre-XDR-TB lineage3 None
SRR18149459 Pre-XDR-TB lineage2.2.1 None
ERR4799792 Pre-XDR-TB lineage2.2.1 in
ERR4796945 Pre-XDR-TB lineage2.2.1 in
ERR3509856 MDR-TB lineage2.2.1 None
ERR1815555 XDR-TB lineage4.3.4.2 None
ERR3132075 MDR-TB lineage4.3.4.2.1 None
SRR11662558 MDR-TB lineage2.2.1 None
ERR4872081 MDR-TB lineage4.2.2.2 None
ERR1034853 Pre-XDR-TB lineage4.3.4.2 None
ERR1664635 XDR-TB lineage4.3.4.2 None
SRR7585404 Pre-XDR-TB lineage2.2.1 in
ERR12544194 MDR-TB lineage4.3.3 None
ERR4799192 Pre-XDR-TB lineage2.2.1 in
ERR4799351 Pre-XDR-TB lineage2.2.1 in
ERR9119890 MDR-TB lineage4.3.3 None
ERR550827 MDR-TB lineage4.1.2.1 None
ERR3287706 MDR-TB lineage2.2.1 pe
ERR4831870 MDR-TB lineage2.2.1.1 vn
SRR25827355 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR4800509 Pre-XDR-TB lineage2.2.1 in
ERR4799636 Pre-XDR-TB lineage2.2.1 None
ERR7162976 Pre-XDR-TB lineage2.2.1 None
SRR6824588 MDR-TB lineage2.2.1 cn
ERR4800583 Pre-XDR-TB lineage2.2.1;lineage4.1.1.3 None
ERR987775 MDR-TB lineage4.6.1.2 None
SRR1175526 MDR-TB lineage4.1.2.1 None
SRR25827633 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR25827459 Pre-XDR-TB lineage1.2.2.2;lineage3 None
ERR1034901 Pre-XDR-TB lineage4.3.4.2 pt
ERR2677398 MDR-TB lineage2.2.1.1 de
DRR130103 Pre-XDR-TB lineage2.2.1.2 None
ERR1227532 Pre-XDR-TB lineage4.3.4.2 None
ERR1034908 XDR-TB lineage4.3.4.2 pt
ERR4797303 Pre-XDR-TB lineage2.2.1 in
ERR5866176 MDR-TB lineage2.2.1 None
SRR1175488 MDR-TB lineage4.1.2.1 None
ERR5865150 MDR-TB lineage4.3.3 None
ERR2707035 MDR-TB lineage5.2 cd
ERR4810866 Pre-XDR-TB lineage2.2.1 cn
ERR4800070 Pre-XDR-TB lineage2.2.1 in
ERR1034632 Pre-XDR-TB lineage4.3.4.2 None
ERR9907685 MDR-TB lineage4.8.1 None
ERR550826 MDR-TB lineage4.1.2.1 None
ERR4796264 Pre-XDR-TB lineage2.2.1 None
SRR16088408 Pre-XDR-TB lineage2.2.1 None
ERR4800028 Pre-XDR-TB lineage2.2.1 in
SRR25827553 Pre-XDR-TB lineage2.2.1;lineage4.3 None
SRR18002892 Pre-XDR-TB lineage2.2.1 None
ERR1664660 XDR-TB lineage4.3.4.2 None
ERR4797904 Pre-XDR-TB lineage2.2.1 in
ERR4797325 Pre-XDR-TB lineage2.2.1 in
ERR11080935 MDR-TB lineage3.1.2.1 None
ERR4831831 MDR-TB lineage2.2.1.1 vn
ERR4797725 Pre-XDR-TB lineage2.2.1 in
SRR2100869 MDR-TB lineage4.1.2.1 None
DRR130185 Pre-XDR-TB lineage2.2.1 None
SRR10525351 MDR-TB lineage4.1.2.1 None
ERR5864815 Pre-XDR-TB lineage2.2.1 None
ERR5865307 MDR-TB lineage2.2.1 None
ERR1227531 Pre-XDR-TB lineage4.3.4.2 None
ERR4797522 Pre-XDR-TB lineage2.2.1 in
ERR4800475 XDR-TB lineage2.2.1 in
SRR10040174 Pre-XDR-TB lineage2.1 None
SRR18593227 Pre-XDR-TB lineage2.2.1 None
ERR4797660 Pre-XDR-TB lineage2.2.1 in
ERR1034878 Pre-XDR-TB lineage4.3.4.2 pt
ERR9119485 MDR-TB lineage4.1.2.1 None
ERR4796665 Pre-XDR-TB lineage2.2.1 in
ERR1034850 XDR-TB lineage4.3.4.2 pt
ERR4799916 Pre-XDR-TB lineage2.2.1 in
SRR28045019 Pre-XDR-TB lineage2.2.1 None
SRR28045585 Pre-XDR-TB lineage2.2.1 None
ERR11775768 MDR-TB lineage2.2.1 None
SRR28045947 Pre-XDR-TB lineage2.2.1 None
SRR28044392 XDR-TB lineage2.2.1 None
SRR28351167 Pre-XDR-TB lineage2.2.1 None
SRR28351254 Pre-XDR-TB lineage2.2.1 None
SRR28351571 Pre-XDR-TB lineage2.2.1 None
SRR28045008 Pre-XDR-TB lineage2.2.1 None
ERR2510624 MDR-TB lineage3 pk
ERR4829952 Pre-XDR-TB lineage3 pk
ERR4831510 Pre-XDR-TB lineage3 pk
ERR4831518 Pre-XDR-TB lineage3 pk
ERR4800315 Pre-XDR-TB lineage2.2.1 in
ERR4799515 Pre-XDR-TB lineage2.2.1 in
ERR4796892 Pre-XDR-TB lineage2.2.1 in
ERR2516689 MDR-TB lineage4.1.1.1 nl
ERR4872127 MDR-TB lineage4.1.2.1 None
ERR4800609 Pre-XDR-TB lineage2.2.1 None
ERR8773819 Pre-XDR-TB lineage2.2.1 None
ERR4796427 Pre-XDR-TB lineage2.2.1 None
ERR11081055 MDR-TB lineage4.1.2.1 None
ERR4830992 Pre-XDR-TB lineage2.2.1 np
SRR25207201 RR-TB lineage2.2.1 None
SRR25827387 Pre-XDR-TB lineage3 None
SRR4423166 Pre-XDR-TB lineage3 None
SRR6824540 XDR-TB lineage2.2.1 cn
SRR9224943 MDR-TB lineage4.3.2 None
ERR403306 Pre-XDR-TB lineage2.2.1 None
ERR11043518 Pre-XDR-TB lineage2.2.1 None
SRR27107293 Pre-XDR-TB lineage4.4.1.1 None
ERR1664646 Pre-XDR-TB lineage4.3.4.2 None
ERR4799073 Pre-XDR-TB lineage4.8 in
ERR4799751 Pre-XDR-TB lineage2.2.1 in
ERR4798765 Pre-XDR-TB lineage2.2.1 in
ERR2307641 MDR-TB lineage2.2.1 None
ERR5865918 MDR-TB lineage2.2.1 None
ERR4800463 Pre-XDR-TB lineage2.2.1 in
ERR4796648 MDR-TB lineage2.2.1 in
SRR25827714 Pre-XDR-TB lineage2.2.1.1 None
SRR25827710 XDR-TB lineage2.2.1 None
ERR1035226 XDR-TB lineage4.3.4.2 pt
ERR5866002 MDR-TB lineage4.1.2.1 None
ERR4797512 Pre-XDR-TB lineage2.2.1 in
ERR270768 MDR-TB lineage4.1.2.1 None
SRR22175259 Pre-XDR-TB lineage2.2.1 None
ERR4798991 Pre-XDR-TB lineage2.2.1 in
ERR2510289 MDR-TB lineage3 None
ERR4797680 Pre-XDR-TB lineage2.2.1 in
SRR7585402 Pre-XDR-TB lineage2.2.1 in
ERR4797827 MDR-TB lineage2.2.1 in
SRR22757400 MDR-TB lineage2.2.1 None
SRR2024889 Pre-XDR-TB lineage2.2.1 cn
SRR5152907 MDR-TB lineage2.2.1 None
ERR4799824 Pre-XDR-TB lineage2.2.1 in
ERR11043183 MDR-TB lineage2.2.1.1 None
ERR4797932 MDR-TB lineage2.2.1 in
ERR4800523 Pre-XDR-TB lineage2.2.1 in
SRR6357001 Pre-XDR-TB lineage2.2.1 None
SRR1166325 MDR-TB lineage4.3.3 ro
ERR1035240 Pre-XDR-TB lineage4.3.4.2 pt
ERR4553907 MDR-TB lineage2.2 None
ERR4797955 Pre-XDR-TB lineage2.2.1 in
SRR22175193 XDR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR7069372 MDR-TB lineage2.2.1 None
ERR4808880 MDR-TB lineage4.3.4.2.1 za
SRR6491199 MDR-TB lineage4.2.1 None
ERR10680006 MDR-TB lineage4.3.4.2 None
ERR9119532 MDR-TB lineage4.6.2.2 None
SRR671862 Pre-XDR-TB lineage4.4.2 cn
ERR553290 MDR-TB lineage4.1.2.1 None
SRR11972191 MDR-TB lineage2.2.1 None
ERR5865970 Pre-XDR-TB lineage2.2.1 None
ERR4798862 Pre-XDR-TB lineage2.2.1 in
ERR4799932 Pre-XDR-TB lineage2.2.1 in
ERR4797119 Pre-XDR-TB lineage2.2.1 in
ERR108457 HR-TB lineage4.8 ru
ERR1035192 Pre-XDR-TB lineage4.3.4.2 pt
ERR4796804 Pre-XDR-TB lineage2.2.1 in
SRR18715198 MDR-TB lineage4.1.2.1 None
ERR5864817 Pre-XDR-TB lineage2.2.1 None
ERR11050210 MDR-TB lineage4.3.4.2 None
ERR4827556 MDR-TB lineage2.2.1 None
ERR4797946 Pre-XDR-TB lineage2.2.1 in
ERR11488514 Pre-XDR-TB lineage4.1.1.3 None
ERR4827593 MDR-TB lineage2.2.1 None
ERR4799517 Pre-XDR-TB lineage2.2.1 in
SRR8758887 Pre-XDR-TB lineage4.1.2.1 None
ERR11050305 MDR-TB lineage4.3.4.2 None
ERR038755 MDR-TB lineage4.1.1.3 ug
SRR1723569 MDR-TB lineage2.2.1 None
ERR1664650 XDR-TB lineage4.3.4.2 None
SRR22424925 Pre-XDR-TB lineage2.2.1 None
SRR5709875 MDR-TB lineage2.2.1 th
ERR4797883 Pre-XDR-TB lineage2.2.1 in
ERR4796785 Pre-XDR-TB lineage2.2.1 in
SRR4423148 Pre-XDR-TB lineage2.2.2 None
SRR25827582 XDR-TB lineage3;lineage4.8 None
ERR553244 MDR-TB lineage4.1.2.1 None
ERR1036289 Pre-XDR-TB lineage4.3.4.2 pt
ERR10680026 MDR-TB lineage4.3.4.2 None
SRR1175498 MDR-TB lineage4.1.2.1 None
ERR7910849 MDR-TB lineage4.1.2.1 pe
ERR1035199 Pre-XDR-TB lineage4.3.4.2 pt
ERR4799671 Pre-XDR-TB lineage2.2.1 in
ERR5865152 MDR-TB lineage4.3.3 None
ERR4799329 Pre-XDR-TB lineage2.2.1 in
ERR8773985 MDR-TB lineage2.2.1 None
ERR11488344 Pre-XDR-TB lineage4.1.1.3 None
ERR4799098 Pre-XDR-TB lineage2.2.1 in
ERR4872255 MDR-TB lineage4.1.2.1 None
ERR2864277 Pre-XDR-TB lineage4.3.4.2 None
SRR16370531 Pre-XDR-TB lineage2.2.1 None
ERR4829865 Pre-XDR-TB lineage4.8 None
SRR14088390 MDR-TB lineage3 None
ERR2517013 Pre-XDR-TB lineage2.2.1 gb
ERR4827920 MDR-TB lineage2.2.1 None
ERR4809313 MDR-TB lineage4.3.4.2.1 za
ERR4800578 Pre-XDR-TB lineage2.2.1 in
ERR4799066 Pre-XDR-TB lineage2.2.1 in
ERR2514398 MDR-TB lineage2.2.1 gb
ERR11050207 MDR-TB lineage4.3.4.2 None
ERR2984797 XDR-TB lineage4.3.4.2 None
SRR25827644 Pre-XDR-TB lineage2.2.1.1 None
ERR4799651 Pre-XDR-TB lineage2.2.1 in
SRR6824411 MDR-TB lineage2.2.1 cn
ERR1664642 XDR-TB lineage4.3.4.2 None
ERR4796926 Pre-XDR-TB lineage2.2.1 in
SRR5341317 Pre-XDR-TB lineage3 None
ERR386971 MDR-TB lineage4.1.2.1 None
SRR25395615 HR-TB lineage4.3.4.2 None
SRR16088381 MDR-TB lineage2.2.1 None
ERR4798115 Pre-XDR-TB lineage2.2.1;lineage4 in
ERR4800300 Pre-XDR-TB lineage2.2.1 in
ERR5864818 MDR-TB lineage2.2.1 None
ERR4796726 MDR-TB lineage2.2.1 in
ERR11050208 MDR-TB lineage4.3.4.2 None
ERR5866483 Pre-XDR-TB lineage2.2.1 None
ERR1035238 Pre-XDR-TB lineage4.3.4.2 pt
ERR4798901 Pre-XDR-TB lineage2.2.1 in
ERR11050209 MDR-TB lineage4.3.4.2 None
ERR1664638 XDR-TB lineage4.3.4.2 None
SRR7653025 Pre-XDR-TB lineage2.2.1 None
ERR9125437 MDR-TB lineage3 None
ERR9119681 Pre-XDR-TB lineage2.2.1 None
ERR4796840 Pre-XDR-TB lineage2.2.1 in
ERR4830909 Pre-XDR-TB lineage2.2.1.1 np
ERR4800062 Pre-XDR-TB lineage2.2.1 in
SRR6367399 MDR-TB lineage1.1.2 au
ERR553095 MDR-TB lineage4.1.2.1 None
ERR10225448 Pre-XDR-TB lineage2.2.1 None
ERR4796767 Pre-XDR-TB lineage2.2.1 in
ERR6362510 MDR-TB lineage4.3.3 None
ERR1034822 Pre-XDR-TB lineage4.3.4.2 pt
SRR25827515 Pre-XDR-TB lineage2.2.1 None
ERR4799510 Pre-XDR-TB lineage2.2.1 in
ERR4813587 MDR-TB lineage4.1.2.1 None
SRR18593224 Pre-XDR-TB lineage2.2.1 None
ERR1034847 XDR-TB lineage4.3.4.2 pt
ERR5865919 MDR-TB lineage2.2.1 None
ERR1034885 XDR-TB lineage4.3.4.2 pt
ERR4162032 MDR-TB lineage5.2 None
ERR4799914 Pre-XDR-TB lineage2.2.1 in
ERR4800063 Pre-XDR-TB lineage2.2.1 in
ERR4972586 Pre-XDR-TB lineage4.1.1.2 None
ERR987752 MDR-TB lineage4.7 None
SRR3105773 RR-TB lineage3 None
SRR11972273 MDR-TB lineage2.2.1 None
SRR25827664 XDR-TB lineage2.2.1 None
ERR1664637 XDR-TB lineage4.3.4.2 None
ERR4796682 Pre-XDR-TB lineage2.2.1 in
ERR4796959 Pre-XDR-TB lineage2.2.1 in
ERR4798669 Pre-XDR-TB lineage2.2.1 in
SRR671799 Pre-XDR-TB lineage2.2.1 cn
ERR550873 MDR-TB lineage4.1.2.1 None
SRR15315979 MDR-TB lineage2.2.1 None
SRR1175497 MDR-TB lineage4.1.2.1 None
SRR11349136 MDR-TB lineage4.1.2.1 None
SRR10380015 Pre-XDR-TB lineage4.2.1 None
ERR2516571 MDR-TB lineage4.1.1.1 nl
ERR4799582 Pre-XDR-TB lineage2.2.1 in
ERR275203 XDR-TB lineage4.3.4.2 pt
ERR5865151 MDR-TB lineage4.3.3 None
SRR21276936 Pre-XDR-TB lineage2.2.1 None
ERR2510216 MDR-TB lineage2.2.1 pe
ERR11488605 Pre-XDR-TB lineage4.1.1.3 None
ERR11488886 Pre-XDR-TB lineage4.1.1.3 None
SRR13449603 HR-TB lineage4.3.3 None