lineage | Count |
---|---|
80 | |
lineage4.9 | 3 |
lineage2 | 2 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage4 | 1 |
La2 | 1 |
lineage2.2.1 | 1 |
lineage4.1.2.1 | 2 |
spoligotype | Count |
---|---|
None | 92 |
ID | Drug resistance | Lineage | Country iso2 | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1196546 | HR-TB | None | SRR1173118 | Other | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR6325445 | HR-TB | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675465 | HR-TB | None | SRR3675510 | Other | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675234 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675311 | Other | None | SRR3675387 | Sensitive | None | SRR3675545 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212001 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045526 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | SRR6044790 | HR-TB | None | SRR6046015 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046066 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6325444 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR3283017 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797044 | Other | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR4810741 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6359045 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR8976043 | HR-TB | None | ERR702404 | HR-TB | None | ERR736874 | HR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | SRR1172728 | MDR-TB | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None |
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