Rv3805c - c.1545C>G
Drug resistance types
0 Sensitive
1 RR-TB
10 HR-TB
3 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage6.3 | 5 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.9 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9 | 6 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1 | 2 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| La3;lineage2 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 1 |
| 3 | |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.2.1;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR28119777 | Other | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR28119752 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR3675236 | Other | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9117709 | Other | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR25827682 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR29051077 | Other | lineage4.9 | None |
|---|
