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SRA data
Rv3862c
- c.-78A>C
Drug resistance types
141 Sensitive
5 RR-TB
26 HR-TB
114 MDR-TB
60 Pre-XDR-TB
11 XDR-TB
30 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
85
lineage4.8
75
lineage4.3.3
36
lineage4.1.1.3
21
lineage1.2.2.1
15
lineage2.2.2
14
lineage4.3.4.2
13
lineage2.2.1.1
10
lineage3
10
lineage4.1.2.1
10
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
387
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130106
Pre-XDR-TB
lineage4.5
None
DRR184884
MDR-TB
lineage2.2.1
vn
ERR1034647
MDR-TB
lineage4.1.1.3
None
ERR10680071
MDR-TB
lineage4.4.1.1
None
ERR11044114
Sensitive
lineage4.8
None
ERR11044295
Sensitive
lineage4.8
None
ERR11044507
Pre-XDR-TB
lineage4.1.1.3
None
ERR11044680
MDR-TB
lineage4.3.3
None
ERR11049272
Sensitive
lineage4.8
None
ERR11049421
Sensitive
lineage4.3.4.2
None
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