EBG00000313325 - n.941C>G
Drug resistance types
47 Sensitive
2 RR-TB
13 HR-TB
9 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 2 |
| lineage4.9 | 7 |
| lineage2.2.2 | 1 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage1.1.2 | 29 |
| lineage3 | 12 |
| lineage2.2.1 | 5 |
| lineage2.2.1.1 | 2 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage1.2.2.2 | 6 |
| 3 | |
| lineage4.8 | 4 |
| lineage2 | 1 |
| lineage4.3.3 | 6 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage5.1.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.6.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.6.4 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1172848 | MDR-TB | lineage1.1.2 | None | SRR1106670 | Other | lineage4.9 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1172347 | Sensitive | lineage1.1.2 | None | SRR1169473 | Sensitive | lineage1.1.2 | None | SRR1169568 | Sensitive | lineage1.1.2 | None | SRR1169576 | Sensitive | lineage1.1.2 | None | SRR1169581 | Sensitive | lineage1.1.2 | None | SRR1172267 | Sensitive | lineage1.1.2 | None | SRR1172274 | Sensitive | lineage1.1.2 | None | SRR1172911 | Sensitive | lineage3 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1172949 | Sensitive | lineage1.1.2 | None | SRR1172943 | HR-TB | lineage3 | None | SRR1173055 | MDR-TB | lineage2.2.1 | None | SRR1173090 | Sensitive | lineage3 | None | SRR1173099 | Sensitive | lineage2.2.1.1 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173111 | Sensitive | lineage1.1.2 | None | SRR1173559 | Sensitive | lineage3 | None | SRR1173597 | Sensitive | lineage1.2.2.2 | None | SRR1173566 | Other | lineage1.1.2 | None | SRR1173721 | Sensitive | lineage1.1.2 | None | SRR1173599 | Sensitive | lineage1.1.2 | None | SRR1173620 | Sensitive | lineage1.1.2 | None | SRR1174295 | HR-TB | lineage1.2.2.2 | None | SRR1173772 | Sensitive | lineage1.1.2 | None | SRR1173874 | Other | lineage1.1.2 | None | SRR1181120 | MDR-TB | lineage2.2.1 | None | SRR1174291 | HR-TB | lineage1.1.2 | None | SRR1174327 | Sensitive | lineage1.2.2.2 | None | SRR3105762 | HR-TB | None | SRR1183150 | Sensitive | lineage1.1.2 | None | SRR1791910 | Other | None | SRR18913746 | Sensitive | lineage2.2.1 | None | ERR4815278 | Other | lineage4.8 | None | SAMN02598974 | Sensitive | lineage1.1.2 | None | SRR12199485 | Other | lineage2 | None | SRR15315871 | Sensitive | lineage4.9 | None | SAMN02598958 | Sensitive | lineage1.1.2 | in | SAMN02599177 | Sensitive | lineage3 | None | ERR1750905 | Sensitive | lineage4.3.3 | za | SAMN02598976 | Sensitive | lineage1.2.2.2 | None | SAMN02599170 | Sensitive | lineage1.1.2 | None | ERR4814951 | Pre-XDR-TB | lineage3.1.2 | gb | ERR4815966 | Other | lineage4.3.4.2 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | SAMN02598968 | HR-TB | lineage1.2.2.2 | None | ERR2510831 | Other | lineage4.3.3 | None | ERR4815985 | Other | lineage5.1.2 | None | SAMN02598977 | Other | lineage1.1.2 | None | ERR4819133 | Other | lineage1.2.2.2 | None | SAMN02599137 | Sensitive | lineage3 | None | ERR4818436 | Other | lineage4.8 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR2513837 | Other | lineage4.1.2.1 | gb | ERR4819140 | Other | lineage4.1.2.1 | None | SAMN02598978 | HR-TB | lineage1.1.2 | None | SAMN02598961 | Sensitive | lineage1.1.2 | None | ERR4819525 | Other | lineage3 | None | ERR4829706 | HR-TB | lineage4.3.3 | it | SAMN02598960 | Sensitive | lineage1.1.2 | in | SAMN02599061 | MDR-TB | lineage3 | None | SAMN02599046 | Sensitive | lineage1.1.2 | None | ERR4820059 | Other | lineage3 | None | ERR4821167 | Other | lineage4.8 | gb | SRR6045312 | Other | lineage1.1.3.3 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821736 | HR-TB | lineage2.2.1 | gb | ERR4828986 | Sensitive | lineage4.4.1.1 | it | SRR6045379 | Other | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7535080 | HR-TB | lineage4.8 | None | ERR440680 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR8649126 | Sensitive | lineage4.4.1.1 | None | ERR025896 | Sensitive | lineage4.3.3 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR9117723 | Other | lineage4.1.1.3.1 | None | ERR702437 | HR-TB | lineage4.6.4 | None | ERR9786392 | Sensitive | lineage4.3.4.1 | None |
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