EBG00000313339 - n.1917C>A


Drug resistance types
31 Sensitive 10 RR-TB 8 HR-TB 6 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 50 Other
lineage Counts
lineage Count
lineage4.1.1 3
lineage3.1.2 1
lineage2.2.1 9
lineage3 6
lineage2.2.1.1 2
lineage4.9 27
lineage4.6.1 1
lineage4.8 8
lineage4.1.2.1 6
lineage4.6.1.1 4
lineage4 3
lineage4.3.4.1 2
lineage4.3.2.1 6
lineage4.3.1.1 1
6
lineage3.1.1 2
lineage4.6.3 1
lineage3.1.2.2 1
lineage4;lineage2.2.1 1
La1.8.1 7
lineage4.1.4 1
lineage4.9;La1.8 1
La1.7.1 1
La1 1
lineage4.3.3 2
lineage4.3.4.2.1 1
lineage1.2.2.2 1
lineage4.9;lineage2.2 1
lineage4.1.2 1
lineage4.9;lineage4.4.2 1
lineage1.1.3.2 1
lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 110
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR2101617 Other lineage4.1.1 None
SRR18213800 Other lineage3.1.2 None
SRR18911000 Sensitive lineage2.2.1 None
SRR21728339 Other lineage3 None
SRR2101684 Other lineage2.2.1.1 None
SRR2101685 Sensitive lineage4.9 None
SRR8692782 Other lineage4.9 None
ERR1199039 Sensitive lineage4.6.1 None
ERR2229554 Other lineage4.8 None
ERR2027257 Other lineage4.1.2.1 None
ERR1199021 Other lineage4.6.1.1 None
ERR2229358 Other lineage4.8 None
ERR2229780 Other lineage4.9 None
ERR2229332 RR-TB lineage4.8 None
ERR2229336 Other lineage4.8 None
ERR2228859 RR-TB lineage4 None
ERR2228810 RR-TB lineage4 None
ERR2228874 Other lineage4 None
ERR1199007 Sensitive lineage4.6.1.1 None
SAMN02350446 Sensitive lineage2.2.1 None
ERR1199009 Sensitive lineage4.6.1.1 None
SRR5007174 Other lineage4.3.4.1 None
ERR1199001 Sensitive lineage4.6.1.1 None
ERR2693238 HR-TB lineage4.9 None
SRR5341417 Pre-XDR-TB lineage3 None
SAMN02350456 Sensitive lineage4.3.2.1 None
ERR4821179 Other lineage4.1.2.1 gb
SRR6046117 RR-TB lineage4.9 None
SRR6045584 Sensitive lineage4.1.2.1 None
SRR6044838 Other lineage4.9 None
SRR6045909 Other lineage4.8 None
SRR6044841 Other lineage4.9 None
SRR6044993 Other lineage3 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045144 Sensitive lineage4.1.2.1 gb
SRR6045110 Other lineage3 None
SRR6045379 Other None
SRR6046015 Other lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR6045289 Other None
SRR6045248 Other lineage3.1.1 None
SRR6046483 Other lineage4.6.3 None
SRR6046440 Other lineage3.1.2.2 None
ERR502484 Sensitive lineage4.9 None
SRR6046766 Other lineage3.1.1 None
SRR6982078 Sensitive None
ERR502482 Sensitive lineage4.9 None
SRR6046541 Other lineage4.9 None
SRR6046815 Other lineage3 None
SRR6153036 Other None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
ERR502485 Sensitive lineage4.9 None
SRR6982139 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982035 Sensitive lineage4.9 None
SRR6982014 Other lineage4.1.1 None
SRR6855917 Other lineage4.8 None
SRR6982075 Sensitive lineage3 None
ERR5162118 Other La1.8.1 None
SRR6982076 Sensitive lineage4.9 None
SRR8073606 Other La1.8.1 None
ERR5162133 Other La1.8.1 None
SRR7131123 Other lineage4.8 None
ERR027451 Pre-XDR-TB lineage2.2.1 ru
ERR019572 HR-TB lineage2.2.1 ru
SRR7131169 Other lineage4.1.2.1 None
SRR7131287 Other lineage2.2.1.1 None
ERR1144989 Sensitive lineage4.8 None
ERR037234 Sensitive lineage4.9 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3283046 MDR-TB lineage4.9 None
ERR3324331 MDR-TB lineage4.3.4.1 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4627369 Other La1.8.1 None
ERR4423546 RR-TB lineage4.3.2.1 None
ERR4450956 Other La1.7.1 None
ERR5863902 MDR-TB lineage2.2.1 None
ERR4627379 Other La1.8.1 None
ERR4769429 Other lineage4.9 None
ERR4797343 MDR-TB lineage2.2.1 in
ERR4797794 MDR-TB lineage2.2.1 in
ERR4769482 Sensitive La1 None
ERR6052050 RR-TB lineage4.3.2.1 None
ERR6052030 RR-TB lineage4.3.2.1 None
ERR736816 Other lineage4.9 None
SRR1062859 Sensitive lineage2.2.1 None
ERR9117681 Other lineage4.3.3 None
SRR1049031 HR-TB lineage4.9 None
ERR7801177 Other lineage4.3.4.2.1 None
ERR8774134 RR-TB lineage4.3.2.1 None
ERR9117827 Other lineage1.2.2.2 None
SRR1049030 Pre-XDR-TB lineage4.9 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR11349135 XDR-TB lineage4.3.3 None
SRR1196557 HR-TB lineage4.9;lineage2.2 None
SRR1181161 Other lineage4.9 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1183080 RR-TB lineage4.9 None
SRR11972311 Pre-XDR-TB None
SRR1791940 Other La1.8.1 None
SRR12199468 Sensitive lineage4.9;lineage4.4.2 None
SRR11972323 RR-TB lineage1.1.3.2 None
SRR11972438 HR-TB lineage1.1.1 None
SRR124451 HR-TB None
SRR1791899 HR-TB La1.8.1 None