EBG00000313339 - n.1917C>A
Drug resistance types
31 Sensitive
10 RR-TB
8 HR-TB
6 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1 | 3 |
| lineage3.1.2 | 1 |
| lineage2.2.1 | 9 |
| lineage3 | 6 |
| lineage2.2.1.1 | 2 |
| lineage4.9 | 27 |
| lineage4.6.1 | 1 |
| lineage4.8 | 8 |
| lineage4.1.2.1 | 6 |
| lineage4.6.1.1 | 4 |
| lineage4 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.3.2.1 | 6 |
| lineage4.3.1.1 | 1 |
| 6 | |
| lineage3.1.1 | 2 |
| lineage4.6.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| La1.8.1 | 7 |
| lineage4.1.4 | 1 |
| lineage4.9;La1.8 | 1 |
| La1.7.1 | 1 |
| La1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 110 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2101617 | Other | lineage4.1.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR21728339 | Other | lineage3 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR2229554 | Other | lineage4.8 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR1199021 | Other | lineage4.6.1.1 | None | ERR2229358 | Other | lineage4.8 | None | ERR2229780 | Other | lineage4.9 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR2229336 | Other | lineage4.8 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228874 | Other | lineage4 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR1199009 | Sensitive | lineage4.6.1.1 | None | SRR5007174 | Other | lineage4.3.4.1 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045584 | Sensitive | lineage4.1.2.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045144 | Sensitive | lineage4.1.2.1 | gb | SRR6045110 | Other | lineage3 | None | SRR6045379 | Other | None | SRR6046015 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045289 | Other | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6046483 | Other | lineage4.6.3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6982078 | Sensitive | None | ERR502482 | Sensitive | lineage4.9 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR6153036 | Other | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR6982139 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982075 | Sensitive | lineage3 | None | ERR5162118 | Other | La1.8.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR8073606 | Other | La1.8.1 | None | ERR5162133 | Other | La1.8.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | ERR019572 | HR-TB | lineage2.2.1 | ru | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4627369 | Other | La1.8.1 | None | ERR4423546 | RR-TB | lineage4.3.2.1 | None | ERR4450956 | Other | La1.7.1 | None | ERR5863902 | MDR-TB | lineage2.2.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4769429 | Other | lineage4.9 | None | ERR4797343 | MDR-TB | lineage2.2.1 | in | ERR4797794 | MDR-TB | lineage2.2.1 | in | ERR4769482 | Sensitive | La1 | None | ERR6052050 | RR-TB | lineage4.3.2.1 | None | ERR6052030 | RR-TB | lineage4.3.2.1 | None | ERR736816 | Other | lineage4.9 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | ERR9117681 | Other | lineage4.3.3 | None | SRR1049031 | HR-TB | lineage4.9 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | ERR8774134 | RR-TB | lineage4.3.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR1196557 | HR-TB | lineage4.9;lineage2.2 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR11972311 | Pre-XDR-TB | None | SRR1791940 | Other | La1.8.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR124451 | HR-TB | None | SRR1791899 | HR-TB | La1.8.1 | None |
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