EBG00000313339 - n.2540T>C
Drug resistance types
3 Sensitive
1 RR-TB
0 HR-TB
6 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.8 | 2 |
| lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2.1 | 7 |
| lineage4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| La1.6 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 26 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13199734 | Other | La1.2 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR10796599 | Other | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | ERR867567 | RR-TB | lineage3 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10993944 | Other | La1.6 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR1334032 | Other | lineage6.1.3 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4817703 | Other | lineage1.1.1.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None |
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