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SRA data
EBG00000313339
- n.2637_2643delACCCCCGinsGGTAC
Drug resistance types
0 Sensitive
3 RR-TB
1 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
3
La1.8.1
2
lineage4.9
2
lineage4.4
1
lineage4.3.2.1
1
lineage3
1
lineage4.1.1.3.1
1
lineage4.1.1.3
1
lineage2.2.1;lineage4.9
1
lineage4.3.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR3468488
Other
La1.8.1
None
ERR4769554
RR-TB
lineage4.9
None
ERR4972567
MDR-TB
lineage4.3.2
None
ERR5311077
Other
La1.8.1
None
ERR5979454
Pre-XDR-TB
lineage3
None
SRR10303325
MDR-TB
lineage2.2.1
None
SRR10430377
MDR-TB
lineage2.2.1
None
SRR11349147
RR-TB
lineage4.3.2.1
None
SRR12708406
HR-TB
lineage2.2.1;lineage4.9
None
SRR16627752
RR-TB
lineage4.4
None
Showing 1 to 10 of 16 entries
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