EBG00000313339 - n.579G>A
Drug resistance types
57 Sensitive
7 RR-TB
8 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 13 |
| lineage4.9 | 29 |
| lineage4.6.1.2 | 2 |
| lineage4.1.2.1 | 5 |
| lineage4.3.2.1 | 6 |
| lineage4.1.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| 6 | |
| lineage1.1 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage2 | 1 |
| lineage4.1.1 | 6 |
| lineage4.4.1.1 | 1 |
| La1.8.1 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.1.1 | 5 |
| lineage4.8 | 7 |
| lineage4.6.1 | 1 |
| lineage4 | 4 |
| lineage1.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.7 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.4 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8;lineage4.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.4 | 1 |
| lineage4.9;La1.8 | 1 |
| La1.2 | 2 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 123 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1173025 | Other | lineage4.9 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR11972265 | MDR-TB | lineage2.2.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR124451 | HR-TB | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | ERR4814329 | Other | lineage4.1.2.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR124453 | HR-TB | None | SRR1791940 | Other | La1.8.1 | None | SRR19576436 | Sensitive | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR176771 | Sensitive | None | ERR4815289 | Other | lineage3 | None | ERR176450 | Sensitive | lineage4.1.1 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR2229554 | Other | lineage4.8 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR1199021 | Other | lineage4.6.1.1 | None | ERR2229358 | Other | lineage4.8 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR2179850 | Sensitive | lineage4 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228822 | Other | lineage4.9 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR2228888 | Other | lineage4.8 | None | ERR1199009 | Sensitive | lineage4.6.1.1 | None | ERR2228874 | Other | lineage4 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | ERR4820264 | Other | lineage1.1.2 | None | ERR4819193 | Other | lineage4.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341430 | Other | lineage3 | None | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6045778 | Other | lineage3.1 | None | ERR2515916 | Sensitive | lineage4.3.4.2.1 | za | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6397770 | Other | lineage4.7 | None | ERR502472 | Other | lineage4.6.2.2 | None | SRR6982078 | Sensitive | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982196 | Sensitive | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR7645808 | HR-TB | lineage4.8;lineage4.2.1 | None | ERR036215 | Other | lineage4.8 | None | ERR019572 | HR-TB | lineage2.2.1 | ru | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | ERR036194 | Other | lineage4.6.1.2 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR1023527 | RR-TB | lineage4 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4188395 | Other | La1.8.1 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR6201802 | Other | La1.2 | None | ERR702399 | Sensitive | lineage5.1.1 | gh |
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