EBG00000313339 - n.71A>T
Drug resistance types
6 Sensitive
1 RR-TB
10 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1 | 1 |
| 5 | |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4 | 7 |
| lineage3.1.2.1 | 1 |
| lineage4.9 | 6 |
| lineage2.1 | 1 |
| lineage3 | 4 |
| lineage4.1.2.1 | 1 |
| lineage4.7 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 1 |
| La1.2 | 1 |
| La1 | 1 |
| lineage2.2.1 | 2 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| La2 | 2 |
| lineage2.2.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21658550 | Other | lineage1.1.1 | None | ERR4815310 | Other | None | ERR4815502 | Other | lineage4.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4815550 | Other | lineage4 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816417 | Other | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR212138 | HR-TB | lineage4 | None | ERR4818831 | Other | lineage3 | None | ERR4820290 | Other | lineage3 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR6045124 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | SRR5341313 | HR-TB | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6046250 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | SRR7851312 | Other | La1.2 | None | ERR3283010 | Other | La1 | None | ERR3283025 | HR-TB | None | ERR3324371 | MDR-TB | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3828632 | Sensitive | lineage4.3.4.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR9119669 | HR-TB | None | SRR13888793 | Sensitive | La2 | None | SRR13888750 | Other | La2 | None | SRR15661608 | MDR-TB | lineage2.2.1.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None |
|---|
