Rv0005 - c.1123_1125delTTGinsCC
Drug resistance types
6 Sensitive
1 RR-TB
3 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9 | 11 |
| lineage2.2.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.9;lineage9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 24 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR1181403 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None |
|---|
