Rv0006 - p.Ala231Ser
Drug resistance types
1 Sensitive
1 RR-TB
32 HR-TB
12 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 7 |
| lineage4.9 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 10 |
| La1.7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La1.7;M.canetti;lineage4.9 | 4 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.9;lineage7 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| 1 | |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1640750 | Other | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7240492 | HR-TB | La1.7.1 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None |
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