lineage | Count |
---|---|
La1;lineage4.1.2 | 1 |
M.canetti;lineage4.2 | 1 |
La1.7;lineage4.9 | 2 |
lineage4.9 | 15 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4.1.1 | 4 |
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 1 |
La3;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
La1.7.1;lineage4.9 | 1 |
lineage1.1.3.1 | 1 |
M.canetti;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
lineage1;lineage4.9 | 1 |
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
ERR212034 | HR-TB | La1.7;lineage4.9 | None |
ERR926156 | Sensitive | lineage4.9 | None |
ERR926165 | Sensitive | lineage4.9 | None |
ERR926157 | Sensitive | lineage4.9 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
ERR4812274 | Sensitive | lineage4.1.1 | None |
ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
ERR926162 | Sensitive | lineage4.9 | None |
SRR1165628 | Other | La3;lineage4.9 | None |
ERR926160 | Sensitive | lineage4.9 | None |
SRR3675461 | RR-TB | lineage4.9 | None |
SRR3732724 | Sensitive | lineage4.1.1 | None |
SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
ERR926163 | Other | lineage4.9 | None |
ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
ERR971389 | Sensitive | lineage4.9 | None |
ERR926164 | Other | lineage4.9 | None |
ERR8479578 | Sensitive | lineage1.1.3.1 | None |
SRR3675441 | Other | lineage4.9 | None |
SRR3675449 | Other | M.canetti;lineage4.9 | None |
SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR779852 | Sensitive | lineage4.9 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
ERR176560 | HR-TB | La1.7;lineage4.9 | None |
ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
ERR926155 | Sensitive | lineage4.9 | None |
ERR3797029 | Other | lineage4.9 | None |
ERR11043193 | Sensitive | lineage4.1.1 | None |
ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
SRR3675446 | RR-TB | lineage4.9 | None |
ERR323045 | HR-TB | lineage1;lineage4.9 | None |
ERR4812677 | Sensitive | lineage4.1.1 | pe |
ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
ERR926161 | Sensitive | lineage4.9 | None |
ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |