lineage | Count |
---|---|
lineage4.8 | 3 |
lineage4 | 1 |
La1.8.1 | 1 |
lineage2.2.1 | 8 |
lineage4.9 | 5 |
lineage2.2.2;lineage2.2.1 | 1 |
lineage2.2.2 | 3 |
lineage4.4.1.1 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.1.1.3.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage3 | 1 |
lineage5.1.1 | 2 |
La1.2 | 1 |
lineage4.7 | 2 |
lineage6.2.3;lineage1.1.2 | 1 |
lineage4.3.4.2 | 2 |
lineage3.1.1 | 1 |
lineage2.2 | 5 |
lineage2.2.1.1 | 1 |
1 |
spoligotype | Count |
---|---|
None | 45 |
ID | Drug resistance | Lineage | Country iso2 | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4813293 | HR-TB | lineage4 | None | ERR4815909 | Other | lineage4.8 | None | SRR1792022 | Other | La1.8.1 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR2514181 | Other | lineage1.2.1.2.1 | None | SRR5152927 | Pre-XDR-TB | lineage4.8 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819430 | Sensitive | lineage4.1.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR6045928 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR2516702 | MDR-TB | lineage2.2.1 | pe | ERR4829238 | Sensitive | lineage3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR6197033 | Other | lineage4.7 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR6197035 | Other | lineage4.7 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None |
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