lineage | Count |
---|---|
lineage4 | 9 |
lineage4.8 | 3 |
lineage2.2.1 | 4 |
lineage2.1 | 1 |
lineage4.1.2 | 1 |
lineage3.1 | 1 |
lineage4.4.2 | 1 |
7 | |
La1.8.1 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2 | 2 |
lineage4.3.4.2 | 2 |
lineage6 | 1 |
spoligotype | Count |
---|---|
None | 34 |
ID | Drug resistance | Lineage | Country iso2 | ERR4812809 | MDR-TB | lineage4 | None | SRR22175248 | Pre-XDR-TB | lineage4.8 | None | ERR8025751 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR4035710 | Sensitive | lineage4.1.2 | None | ERR2510623 | Pre-XDR-TB | lineage3.1 | pk | SRR5341373 | HR-TB | lineage4 | None | ERR1873479 | Pre-XDR-TB | lineage2.2.1 | za | ERR2179653 | MDR-TB | lineage4.4.2 | cn | SRR5341293 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR8600244 | Other | La1.8.1 | None | SRR6357007 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829374 | MDR-TB | lineage4.1.2.1 | it | ERR3283021 | HR-TB | None | ERR10748193 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3287840 | MDR-TB | lineage4.3.4.2 | pe | ERR3283025 | HR-TB | None | ERR9030273 | MDR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR4553673 | MDR-TB | lineage4.8 | None | ERR4798511 | Pre-XDR-TB | lineage4.8 | in | ERR4810624 | HR-TB | lineage2.2 | None | ERR4769521 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | SRR10854751 | MDR-TB | lineage4.3.4.2 | None | ERR9119669 | HR-TB | None | ERR9787030 | Sensitive | lineage6 | None |
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