Rv1129c - p.Asp160Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
89 Sensitive
8 RR-TB
61 HR-TB
273 MDR-TB
171 Pre-XDR-TB
15 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 319 |
| lineage4.3.4.2 | 6 |
| lineage4.2.1 | 12 |
| lineage4.1.2.1 | 18 |
| lineage4.4 | 7 |
| lineage3 | 39 |
| lineage4.5 | 19 |
| lineage4.3.3 | 34 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.4.2 | 5 |
| lineage4.9 | 2 |
| lineage4.3.2 | 6 |
| lineage4.2.2.1 | 6 |
| lineage2.2.2 | 29 |
| lineage2.2;lineage3 | 1 |
| lineage4.1.2 | 4 |
| lineage4.8 | 7 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage2.2.1.1 | 17 |
| lineage4.8.1 | 11 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage4 | 4 |
| lineage4.7 | 2 |
| lineage3.1.2 | 4 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage1.1.1;lineage2.2.1 | 2 |
| lineage4.2.2.1;lineage5 | 2 |
| lineage4.4.1.1 | 3 |
| lineage3.1.1 | 7 |
| lineage4.1.4 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.3.1 | 2 |
| lineage1.2.2.2 | 3 |
| lineage4.2.2.2 | 3 |
| lineage2.2.1;lineage3 | 6 |
| lineage1.1.3.1 | 2 |
| lineage1.1.2 | 2 |
| lineage5 | 2 |
| lineage2.2.1.1;lineage4.8 | 1 |
| lineage4.3.4.1 | 2 |
| 2 | |
| lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 5 |
| lineage4.6.2.2 | 1 |
| lineage2.1 | 4 |
| lineage4.3.2.1 | 4 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.2.2 | 2 |
| lineage4.3 | 1 |
| lineage2.2.1;lineage4.2.1.1 | 1 |
| lineage4.6.4 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3.1 | 1 |
| lineage4.6.3 | 1 |
| lineage4.2 | 1 |
| lineage4.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 634 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12142379 | MDR-TB | lineage2.2.1 | None | SRR067482 | MDR-TB | lineage2.2.1 | None | ERR7737763 | MDR-TB | lineage2.2.1 | None | DRR474058 | HR-TB | lineage2.2.1 | None | SRR29231299 | MDR-TB | lineage4.3.4.2 | None | ERR11488875 | MDR-TB | lineage2.2.1 | None | ERR13285082 | MDR-TB | lineage4.2.1 | None | SRR069949 | MDR-TB | lineage2.2.1 | None | ERR13260523 | MDR-TB | lineage4.1.2.1 | None | ERR13284953 | MDR-TB | lineage4.4 | None | ERR13292330 | Sensitive | lineage2.2.1 | None | SRR29016896 | MDR-TB | lineage2.2.1 | None | ERR13265083 | Sensitive | lineage2.2.1 | None | SRR1169119 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062932 | Pre-XDR-TB | lineage3 | None | SRR7516320 | MDR-TB | lineage2.2.1 | None | SRR25515048 | Sensitive | lineage2.2.1 | None | ERR2653142 | MDR-TB | lineage4.3.4.2 | None | SRR15316145 | Sensitive | lineage4.5 | None | ERR13260228 | MDR-TB | lineage4.3.3 | None | SRR13423544 | Other | lineage4.5 | None | ERR6866482 | Sensitive | lineage4.1.2.1;lineage4.4.1.1 | None | SRR29050948 | MDR-TB | lineage2.2.1 | None | ERR13276066 | HR-TB | lineage2.2.1 | None | SRR15368990 | Pre-XDR-TB | lineage4.5 | None | SRR7516394 | MDR-TB | lineage2.2.1 | None | ERR2307779 | HR-TB | lineage2.2.1 | None | ERR5865289 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069373 | MDR-TB | lineage2.2.1 | None | ERR13291123 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR28741145 | MDR-TB | lineage4.5 | None | ERR13284389 | MDR-TB | lineage3 | None | SRR18715020 | Other | lineage4.3.3 | None | ERR13439905 | HR-TB | lineage2.2.1 | None | SRR3742656 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510440 | MDR-TB | lineage4.9 | pk | ERR1035344 | MDR-TB | lineage4.3.2 | br | SRR29539653 | MDR-TB | lineage2.2.1 | None | ERR13260015 | MDR-TB | lineage2.2.1 | None | SRR29772769 | MDR-TB | lineage3 | None | SRR29274262 | MDR-TB | lineage4.2.2.1 | None | SRR29093372 | XDR-TB | lineage2.2.2 | None | SRR10147676 | Pre-XDR-TB | lineage3 | None | ERR551168 | HR-TB | lineage2.2.1 | None | SRR14782673 | HR-TB | lineage4.3.3 | None | ERR4822398 | Pre-XDR-TB | lineage2.2.1 | ua | SRR1173380 | Pre-XDR-TB | lineage2.2;lineage3 | None | ERR5865440 | MDR-TB | lineage2.2.1 | None | SRR1368334 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811995 | Sensitive | lineage4.1.2 | pe | ERR3148156 | HR-TB | lineage4.8 | mx | ERR3148192 | MDR-TB | lineage4.3.3 | mx | ERR4798520 | Sensitive | lineage3 | in | SRR7755683 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR2843515 | MDR-TB | lineage2.2.1 | None | SRR29050991 | HR-TB | lineage2.2.1.1 | None | SRR10305979 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360566 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360560 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360626 | Pre-XDR-TB | lineage2.2.2 | kr | SRR28393262 | MDR-TB | lineage4.8 | None | SRR15723125 | Pre-XDR-TB | lineage2.2.2 | None | SRR1163332 | Pre-XDR-TB | lineage2.2.1 | None | SRR30180400 | MDR-TB | lineage2.2.2 | None | ERR2843519 | HR-TB | lineage2.2.1.1 | None | SRR786397 | MDR-TB | lineage3 | None | ERR4811100 | Sensitive | lineage2.2.1.1 | cn | SRR1172311 | MDR-TB | lineage4.8.1 | None | SRR23862072 | MDR-TB | lineage2.2.1 | None | ERR5866229 | MDR-TB | lineage2.2.1 | None | SRR6397961 | HR-TB | lineage2.2.1 | ca | SRR28498382 | XDR-TB | lineage2.2.1 | None | SRR28044868 | HR-TB | lineage3 | None | SRR28045861 | MDR-TB | lineage2.2.1 | None | ERR7910850 | MDR-TB | lineage4.3.3 | pe | SRR28351409 | MDR-TB | lineage4.2.1 | None | SRR28351656 | MDR-TB | lineage4.2.1 | None | ERR11775515 | MDR-TB | lineage4.8.1 | None | ERR11773833 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773780 | MDR-TB | lineage2.2.1 | None | SRR6152877 | Sensitive | lineage3 | ca | ERR4832027 | HR-TB | lineage2.2.1 | vn | ERR4828721 | HR-TB | lineage2.2.1 | vn | SRR2024916 | MDR-TB | lineage2.2.1 | cn | ERR7911276 | MDR-TB | lineage2.2.1 | vn | ERR8665527 | Pre-XDR-TB | lineage4.3.3 | None | ERR4828145 | MDR-TB | lineage2.2.1 | vn | ERR4822594 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm | ERR4830248 | HR-TB | lineage2.2.1 | vn | SRR28741153 | MDR-TB | lineage4.5 | None | ERR4830300 | HR-TB | lineage2.2.1 | vn | ERR8686156 | Pre-XDR-TB | lineage2.2.2 | None | SRR16088279 | Other | lineage2.2.1 | None | ERR8700386 | Pre-XDR-TB | lineage2.2.2 | None | ERR4830572 | MDR-TB | lineage2.2.1 | tm | ERR4812945 | MDR-TB | lineage4.3.3 | pe | ERR2707013 | MDR-TB | lineage4.3.4.2 | cd | ERR7911398 | MDR-TB | lineage2.2.1 | us | ERR4811872 | HR-TB | lineage4 | pe | SRR29539010 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830754 | Pre-XDR-TB | lineage3 | ir | ERR4828580 | MDR-TB | lineage2.2.1 | vn | ERR502939 | MDR-TB | lineage4.4 | None | ERR4813360 | Pre-XDR-TB | lineage4.3.3 | None | ERR2510718 | Pre-XDR-TB | lineage2.2.1 | it | ERR266521 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013562 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976072 | Pre-XDR-TB | lineage2.2.2 | None | ERR551472 | MDR-TB | lineage2.2.1 | None | ERR5866230 | MDR-TB | lineage2.2.1 | None | SRR2099986 | HR-TB | lineage3 | None | SRR2100289 | HR-TB | lineage3 | None | SRR2100740 | Pre-XDR-TB | lineage2.2.1 | None | ERR1465957 | Sensitive | lineage4.7 | None | SRR1710076 | Pre-XDR-TB | lineage2.2.2 | cn | ERR2516749 | MDR-TB | lineage2.2.1 | gb | SRR5709743 | Sensitive | lineage4.5 | th | SRR6339667 | MDR-TB | lineage3.1.2 | au | SRR6824524 | MDR-TB | lineage4.4 | cn | SRR10380209 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR1140589 | Pre-XDR-TB | lineage3 | None | SRR6824486 | MDR-TB | lineage4.5 | cn | SRR6824546 | Pre-XDR-TB | lineage2.2.1 | cn | SRR15368748 | MDR-TB | lineage2.2.1 | None | SRR25515426 | Pre-XDR-TB | lineage2.2.1 | None | ERR13439855 | HR-TB | lineage1.1.1;lineage2.2.1 | None | SRR29017050 | MDR-TB | lineage3 | None | ERR13281466 | MDR-TB | lineage4.2.2.1;lineage5 | None | SRR1169205 | MDR-TB | lineage4.8.1 | None | ERR4972547 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR13284662 | MDR-TB | lineage3 | None | SRR16149174 | MDR-TB | lineage4.2.2.1 | None | SRR7535063 | Sensitive | lineage3.1.1 | None | SRR13232673 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316372 | Pre-XDR-TB | lineage2.2.1 | None | SRR18911991 | Sensitive | lineage4.1.2.1 | None | SRR1723607 | MDR-TB | lineage2.2.1 | None | SRR23862154 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866231 | MDR-TB | lineage2.2.1 | None | SRR21576690 | MDR-TB | lineage2.2.1 | None | ERR13276394 | XDR-TB | lineage2.2.1 | None | SRR6480577 | Sensitive | lineage4.1.2.1 | None | ERR11081774 | Sensitive | lineage4.5 | None | SRR3742669 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969644 | MDR-TB | lineage2.2.1 | None | ERR2653196 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR3794457 | Pre-XDR-TB | lineage2.2.1 | None | SRR21689852 | Sensitive | lineage3.1.1 | None | SRR3742655 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153094 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273669 | MDR-TB | lineage4.1.2.1 | None | ERR13266438 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051022 | HR-TB | lineage4.1.4 | None | SRR15369028 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285073 | MDR-TB | lineage4.2.1 | None | ERR13261278 | MDR-TB | lineage2.2.1 | None | ERR10877856 | MDR-TB | lineage2.2.1 | None | SRR21576585 | MDR-TB | lineage2.2.1 | None | SRR1165659 | MDR-TB | lineage4.8.1 | None | ERR5865280 | Pre-XDR-TB | lineage2.2.1 | None | ERR551295_ERR551296 | MDR-TB | lineage2.2.1 | None | SRR6785386 | MDR-TB | lineage2.2.1 | None | SRR22424849 | Other | lineage3.1.2.1 | None | SRR15723011 | Pre-XDR-TB | lineage2.2.2 | None | SRR25389551 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653122 | XDR-TB | lineage4.3.4.2 | None | SRR29341573 | MDR-TB | lineage4.3.1 | None | SRR29017065 | MDR-TB | lineage1.2.2.2 | None | ERR11068765 | Other | lineage4.5 | None | SRR18665444 | MDR-TB | lineage4.1.2.1 | None | ERR7737670 | MDR-TB | lineage4.2.2.2 | None | ERR13291960 | Sensitive | lineage4.1.2.1 | None | ERR4827805 | MDR-TB | lineage2.2.1 | None | ERR551295 | MDR-TB | lineage2.2.1 | None | SRR25515529 | Sensitive | lineage4.5 | None | SRR1062892 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR11033761 | MDR-TB | lineage2.2.1 | None | SRR1048861 | Pre-XDR-TB | lineage2.2.2 | None | ERR13273030 | Sensitive | lineage2.2.1 | None | SRR1062939 | Pre-XDR-TB | lineage3 | None | ERR13285418 | Sensitive | lineage3.1.1 | None | ERR551167 | HR-TB | lineage2.2.1 | None | SRR10808797 | Sensitive | lineage1.1.3.1 | None | SRR16149182 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR21710572 | Sensitive | lineage4.1.2.1 | None | SRR10500314 | Pre-XDR-TB | lineage1.1.2 | None | SRR24114366 | MDR-TB | lineage3 | None | SRR25515082 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035277 | Pre-XDR-TB | lineage4.3.2 | br | SRR29772377 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866547 | MDR-TB | lineage2.2.1 | None | ERR4797794 | MDR-TB | lineage2.2.1 | in | ERR13262023 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807627 | XDR-TB | lineage2.2.1 | None | SRR15316055 | Other | lineage2.2.1 | None | ERR4872200 | MDR-TB | lineage5 | None | ERR3273147 | MDR-TB | lineage2.2.1.1 | None | ERR4800290 | XDR-TB | lineage2.2.1.1;lineage4.8 | in | SRR29441079 | Sensitive | lineage2.2.1 | None | ERR9993090 | XDR-TB | lineage4.3.3 | None | SRR1013561 | Pre-XDR-TB | lineage2.2.2 | None | ERR12385620 | Sensitive | lineage4.3.4.1 | None | ERR13260133 | MDR-TB | lineage4.1.2 | None | SRR6485006 | Other | lineage2.2.1 | None | ERR5866352 | MDR-TB | lineage2.2.1 | None | SRR27069435 | MDR-TB | lineage2.2.1 | None | SRR12420430 | Sensitive | lineage2.2.1 | None | ERR7737650 | MDR-TB | lineage2.2.1.1 | None | ERR4822384 | MDR-TB | lineage2.2.1 | kg | SRR15316503 | Sensitive | lineage2.2.1 | None | ERR5865282 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02381049 | Pre-XDR-TB | lineage3 | ug | ERR11081205 | MDR-TB | lineage4.4 | None | SRR22249732 | MDR-TB | lineage2.2.1 | None | SAMN02403592 | MDR-TB | lineage4.8.1 | za | SAMN02381042 | Pre-XDR-TB | lineage3 | ug | SRR29538927 | MDR-TB | lineage2.2.1 | None | ERR4816677 | Sensitive | lineage4.5 | None | SRR1140625 | Pre-XDR-TB | lineage3 | None | ERR8975204 | Sensitive | lineage4.3.2 | None | ERR4810486 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810642 | HR-TB | lineage2.2.1 | cn | SRR8651577 | Pre-XDR-TB | lineage2.2.1 | cn | SRR28706587 | MDR-TB | lineage2.2.1 | None | SRR1013573 | Pre-XDR-TB | lineage2.2.2 | None | ERR752166 | Sensitive | lineage1.1.3.1 | th | SRR28351322 | Pre-XDR-TB | lineage3 | None | SRR28393485 | Pre-XDR-TB | lineage2.2.1 | None | SRR28394080 | Sensitive | lineage4.3.3 | None | SRR6397615 | HR-TB | lineage2.2.1 | ca | ERR4810925 | Pre-XDR-TB | lineage4 | cn | SRR1172260 | MDR-TB | lineage4.8.1 | None | ERR4810960 | MDR-TB | lineage2.2.1 | cn | ERR4811041 | RR-TB | lineage2.2.1 | cn | SRR27069431 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351472 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865283 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865755 | Pre-XDR-TB | lineage2.2.1 | None | SAMN03246351 | MDR-TB | lineage2.2.1 | cn | ERR4553406 | MDR-TB | None | SRR28409714 | Sensitive | lineage4.1.2.1 | None | ERR4828227 | MDR-TB | lineage2.2.1 | vn | ERR4831798 | HR-TB | lineage2.2.1 | vn | ERR4831796 | HR-TB | lineage2.2.1 | None | ERR4831898 | MDR-TB | lineage2.2.1 | None | ERR4831909 | MDR-TB | lineage2.2.1 | vn | ERR4831957 | MDR-TB | lineage2.2.1 | vn | ERR4830580 | MDR-TB | lineage2.2.1 | tm | ERR4813086 | MDR-TB | lineage4.3.3 | pe | ERR4832063 | HR-TB | lineage2.2.1 | vn | SRR21277429 | MDR-TB | lineage2.2.1.1 | None | ERR11043505 | MDR-TB | lineage4.2.2.1;lineage5 | None | ERR11049984 | Other | lineage4.5 | None | SRR24709961 | MDR-TB | lineage2.2.1 | None | SRR22461652 | MDR-TB | lineage4.3.3 | None | SRR25827502 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2.1 | None | SRR28351648 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR10748167 | MDR-TB | lineage4.3.3 | None | ERR2510482 | MDR-TB | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR15014678 | MDR-TB | lineage2.2.1.1 | None | SAMEA2533843 | MDR-TB | lineage2.2.1 | uz | SAMEA2534444 | MDR-TB | lineage2.2.1 | uz | SRR2101533 | Sensitive | lineage2.2.1 | None | ERR4814494 | Pre-XDR-TB | lineage3 | gb | ERR4816072 | Sensitive | lineage4.6.1.1 | gb | ERR4817248 | Other | lineage4.6.2.2 | gb | SAMEA2533751 | HR-TB | lineage2.2.1 | tm | SRR6824587 | MDR-TB | lineage2.2.1 | cn | SRR6824295 | MDR-TB | lineage2.2.1 | cn | SRR6824635 | MDR-TB | lineage2.2.1 | cn | SRR6824374 | MDR-TB | lineage2.2.1 | cn | SRR6824569 | MDR-TB | lineage2.2.1 | cn | SRR15723006 | Pre-XDR-TB | lineage2.1 | None | SRR10380106 | Pre-XDR-TB | lineage4.3.3 | None | ERR11043735 | XDR-TB | lineage2.2.1 | None | ERR5866350 | MDR-TB | lineage2.2.1 | None | SAMN02586058 | RR-TB | lineage4.3.2.1 | za | SRR5153605 | Pre-XDR-TB | lineage2.2.1 | None | SRR1368333 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065637 | HR-TB | lineage2.2.1 | vn | SRR14782379 | MDR-TB | lineage2.2.1 | None | SRR28498612 | MDR-TB | lineage4.2.1 | None | SRR14802165 | HR-TB | lineage2.2.1 | None | SRR6824410 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5864825 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065451 | HR-TB | lineage2.2.1 | vn | SRR5065610 | MDR-TB | lineage2.2.1 | vn | SRR5065360 | Sensitive | lineage2.2.1 | vn | SRR5067674 | Sensitive | lineage4.5 | vn | SRR22251843 | Sensitive | lineage2.2.1 | None | SRR3105730 | MDR-TB | lineage4.8 | None | SRR25340747 | Sensitive | lineage3.1.2 | None | ERR10748509 | MDR-TB | lineage4.4.1.1 | None | ERR270700 | HR-TB | lineage3 | None | SRR25534239 | Sensitive | lineage4.4.2 | None | SRR26399409 | HR-TB | lineage2.2.1 | None | SRR29017303 | HR-TB | lineage2.2.1 | None | ERR5865288 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035350 | MDR-TB | lineage4.3.2 | br | ERR11082248 | Sensitive | lineage2.2.1 | None | SRR9613542 | MDR-TB | lineage4.1.2 | None | SRR12420558 | MDR-TB | lineage2.2.1 | None | SRR10305838 | RR-TB | lineage2.2.1 | None | SRR24709965 | MDR-TB | lineage2.2.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR5979432 | Sensitive | lineage3.1.1 | None | SRR28351389 | MDR-TB | lineage2.2.1;lineage4 | None | SRR1368335 | Pre-XDR-TB | lineage2.2.1 | None | ERR13286125 | Pre-XDR-TB | lineage4.3.3 | None | SRR21277444 | MDR-TB | lineage2.2.1.1 | None | ERR5866341 | MDR-TB | lineage2.2.1 | None | SRR10040150 | MDR-TB | lineage2.2.1.1 | None | ERR5865290 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243556 | MDR-TB | lineage2.2.1 | None | ERR4810914 | Sensitive | lineage2.2.1 | cn | ERR5866136 | MDR-TB | lineage2.2.1 | None | SRR15723268 | Sensitive | lineage2.2.1 | None | SRR1167375 | MDR-TB | lineage4.8.1 | None | ERR4822586 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm | ERR4831886 | MDR-TB | lineage2.2.1 | vn | SRR20632813 | MDR-TB | lineage2.2.1 | None | SRR1172230 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284545 | MDR-TB | lineage2.2.1 | None | ERR5865438 | MDR-TB | lineage2.2.1 | None | ERR13260172 | MDR-TB | lineage4.3.2 | None | ERR11811390 | HR-TB | lineage2.2.1 | None | SRR1049607 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR29050969 | MDR-TB | lineage2.2.1 | None | SRR3742670 | Pre-XDR-TB | lineage2.2.1 | None | SRR10809026 | MDR-TB | lineage2.1 | None | SRR12931805 | Sensitive | lineage4.3.4.2 | None | ERR550850 | MDR-TB | lineage2.2.1 | None | ERR13273290 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276216 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782342 | MDR-TB | lineage4.2.1 | None | SRR1140575 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR6358740 | MDR-TB | lineage4.6.1.2 | None | SRR6856020 | Sensitive | lineage4.1.2.1 | None | SRR29538937 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865291 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273627 | MDR-TB | lineage4.1.2.1 | None | ERR9119336 | HR-TB | lineage2.2.1 | None | ERR13260684 | MDR-TB | lineage2.2.1 | None | ERR11069080 | MDR-TB | lineage3 | None | ERR403327 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639755 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307736 | MDR-TB | lineage2.2.1 | None | SRR15368960 | HR-TB | lineage2.2.1.1 | None | SRR25827447 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR8773647 | RR-TB | lineage4.8 | None | SRR671873 | Sensitive | lineage3 | cn | ERR13292392 | Sensitive | lineage4.1.2.1 | None | SRR15369054 | Sensitive | lineage4.2.2 | None | SRR13423584 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827350 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR11033663 | MDR-TB | lineage2.2.1 | None | SRR29093379 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866351 | MDR-TB | lineage2.2.1 | None | SRR29274264 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR6982346 | Sensitive | lineage2.2.1 | None | ERR13248738 | MDR-TB | lineage2.2.1 | None | SRR29539124 | MDR-TB | lineage2.2.1 | None | ERR176668 | Sensitive | lineage3.1.1 | mw | SRR1368336 | Pre-XDR-TB | lineage2.2.1 | None | ERR4457834 | Sensitive | lineage4 | None | SRR1172071 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772573 | MDR-TB | lineage3 | None | ERR3148179 | Pre-XDR-TB | lineage3 | mx | ERR4798055 | MDR-TB | lineage4.3 | in | SRR18714963 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277096 | HR-TB | lineage4.5 | None | ERR11811371 | HR-TB | lineage2.2.1 | None | SRR25207010 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822285 | XDR-TB | lineage2.2.1 | None | ERR4799333 | Pre-XDR-TB | lineage3 | in | ERR4820156 | Sensitive | lineage3 | gb | SRR29539049 | Sensitive | lineage4.8 | None | ERR552147 | MDR-TB | lineage2.2.1 | None | SAMN02403593 | MDR-TB | lineage4.8.1 | za | SRR671824 | Pre-XDR-TB | lineage2.2.2 | cn | ERR13191066 | MDR-TB | lineage2.2.2 | None | ERR13191366 | MDR-TB | lineage2.2.2 | None | ERR6358839 | MDR-TB | lineage4.6.1.1 | None | SRR16115088 | Sensitive | lineage2.2.1 | None | SRR1013574 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811808 | Sensitive | lineage4 | None | ERR768036 | Sensitive | lineage2.2.1 | th | SRR069945 | MDR-TB | lineage2.2.1 | None | ERR11775817 | Sensitive | lineage3.1.1 | None | SRR1048880 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048879 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049608 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR4553425 | HR-TB | None | SRR18715333 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | ERR751755 | Sensitive | lineage2.2.1 | th | SRR28239639 | MDR-TB | lineage2.2.1 | None | SRR28393486 | MDR-TB | lineage4.3.3 | None | ERR4810481 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4831791 | HR-TB | lineage1.1.1;lineage2.2.1 | vn | ERR4828422 | HR-TB | lineage2.2.1.1 | vn | ERR4831931 | MDR-TB | lineage2.2.1 | vn | ERR4831953 | MDR-TB | lineage2.2.1 | vn | ERR4832039 | HR-TB | lineage2.2.1 | vn | ERR4810932 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911425 | MDR-TB | lineage2.2.1 | us | ERR4828575 | MDR-TB | lineage2.2.1 | None | SRR29772544 | MDR-TB | lineage4.3.3 | None | ERR7911733 | MDR-TB | lineage2.2.1 | us | ERR4831176 | Sensitive | lineage4.7 | de | ERR4829978 | MDR-TB | lineage4.6.4 | None | ERR4831481 | Pre-XDR-TB | lineage1.1.2 | None | SRR16088214 | MDR-TB | lineage2.2.1 | None | ERR5866134 | MDR-TB | lineage2.2.1 | None | ERR9992664 | MDR-TB | lineage4.3.3 | None | SRR1163392 | Pre-XDR-TB | lineage2.2.1 | None | ERR228061 | MDR-TB | lineage2.2.1 | ru | ERR067647 | MDR-TB | lineage2.2.1 | ru | ERR3170454 | HR-TB | lineage6.3.1 | gh | ERR3148177 | Pre-XDR-TB | lineage3 | mx | ERR2516984 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2513872 | Pre-XDR-TB | lineage3 | gb | ERR2513954 | Pre-XDR-TB | lineage3 | gb | SRR5709949 | Pre-XDR-TB | lineage2.2.1 | th | ERR161147 | HR-TB | lineage4.3.4.2.1 | mw | ERR11082011 | MDR-TB | lineage2.2.1 | None | SRR23862159 | MDR-TB | lineage2.2.1 | None | SRR21709859 | HR-TB | lineage2.2.1 | None | ERR12118001 | MDR-TB | lineage4.3.3 | None | SRR16088406 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206965 | Pre-XDR-TB | lineage2.2.1 | None | SRR26399731 | HR-TB | lineage2.2.1 | None | SRR28351649 | HR-TB | lineage2.2.1 | None | SRR7646001 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088511 | Other | lineage4.1.2.1 | None | ERR5866420 | MDR-TB | lineage2.2.1 | None | ERR13291970 | Sensitive | lineage4.1.2.1 | None | ERR13290720 | Pre-XDR-TB | lineage2.2.1 | None | SRR29126478 | MDR-TB | lineage4.3.1 | None | SRR29772515 | MDR-TB | lineage2.2.1.1 | None | SRR28741118 | MDR-TB | lineage2.1 | None | SRR29274281 | MDR-TB | lineage4.2.2.1 | None | ERR3273176 | MDR-TB | lineage2.2.1 | None | SRR29051235 | MDR-TB | lineage2.2.1 | None | ERR13291922 | HR-TB | lineage2.2.1 | None | SRR5065631 | HR-TB | lineage2.2.1 | vn | SRR21279363 | MDR-TB | lineage2.2.1.1 | None | ERR4821955 | Pre-XDR-TB | lineage3 | None | SRR10397120 | Pre-XDR-TB | lineage2.2.1 | None | SRR5067401 | Other | lineage2.2.1 | vn | SRR21277578 | Pre-XDR-TB | lineage4.5 | None | ERR8025550 | Pre-XDR-TB | lineage2.2.2 | None | ERR4819593 | Sensitive | lineage4.5 | None | ERR2179755 | HR-TB | lineage4.4.2 | cn | ERR11082359 | MDR-TB | lineage2.2.1 | None | SRR6964583 | Other | lineage4.5 | None | SRR29017090 | MDR-TB | lineage1.2.2.2 | None | SRR15723024 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993126 | XDR-TB | lineage2.2.2 | None | SRR10380197 | MDR-TB | lineage4.3.3 | None | ERR4797902 | XDR-TB | lineage2.2.1.1 | in | ERR6358745 | MDR-TB | lineage4.6.1.2 | None | ERR4813657 | MDR-TB | lineage4.3.2 | None | ERR4799245 | XDR-TB | lineage2.2.1.1 | in | ERR4800353 | XDR-TB | lineage2.2.1.1 | in | ERR9285960 | Sensitive | lineage3.1.1 | None | ERR13286117 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801340 | HR-TB | lineage2.2.1 | None | ERR9993081 | XDR-TB | lineage4.3.3 | None | SRR14519834 | HR-TB | lineage4.1.2.1 | None | ERR4811076 | Sensitive | lineage2.2.1;lineage4.5 | cn | SRR1723608 | MDR-TB | lineage2.2.1 | None | ERR9119282 | HR-TB | lineage2.2.1 | None | SRR21276914 | MDR-TB | lineage2.2.1 | None | ERR13260152 | MDR-TB | lineage4.3.3 | None | ERR13260130 | MDR-TB | lineage4.3.3 | None | ERR13260119 | MDR-TB | lineage4.3.3 | None | ERR13261653 | MDR-TB | lineage4.3.3 | None | ERR13261956 | MDR-TB | lineage4.3.3 | None | SRR5153602 | MDR-TB | lineage2.2.1 | None | SRR5153820 | Pre-XDR-TB | lineage2.2.1 | None | ERR9286150 | Sensitive | lineage4.6.1.2 | None | SRR26399445 | HR-TB | lineage2.2.1 | None | ERR7737641 | MDR-TB | lineage4.2.2.2 | None | SRR16370501 | MDR-TB | lineage4.3.3 | None | SRR1184314 | RR-TB | lineage4.3.2.1 | None | SRR10305983 | MDR-TB | lineage4.4 | None | SRR21732102 | Sensitive | lineage2.2.1 | None | ERR11043661 | MDR-TB | lineage4.3.3 | None | ERR11043578 | MDR-TB | lineage4.2.1 | None | SRR21277076 | Sensitive | lineage4.2.2 | None | SRR21277127 | Other | lineage2.2.2 | None | ERR11081823 | MDR-TB | lineage3 | None | SRR1049733 | Pre-XDR-TB | lineage3 | None | SRR1723994 | Pre-XDR-TB | lineage4.4.2 | cn | SRR1723811 | MDR-TB | lineage2.2.1 | cn | SRR15014760 | Pre-XDR-TB | lineage3.1.2 | None | SRR13232634 | MDR-TB | lineage2.2.1 | None | ERR11243579 | MDR-TB | lineage2.2.1 | None | SRR28239997 | Sensitive | lineage4.2.1 | None | SRR29539432 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163202 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284744 | MDR-TB | lineage2.2.1 | None | ERR2179676 | MDR-TB | lineage4.5 | cn | ERR2179657 | Pre-XDR-TB | lineage4.4.2 | cn | ERR551296 | MDR-TB | lineage2.2.1 | None | SRR1723491 | Sensitive | lineage2.2.1 | cn | SRR10305965 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276865 | XDR-TB | lineage2.2.1 | None | ERR6358776 | MDR-TB | lineage4.6.1.2 | None | ERR4423629 | Pre-XDR-TB | lineage3 | None | SRR16149160 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR25515018 | Pre-XDR-TB | lineage2.2.1 | None | SRR13583386 | HR-TB | lineage4.1.4 | None | ERR10868185 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048862 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207164 | MDR-TB | lineage2.2.1 | None | SRR18911597 | Sensitive | lineage2.2.1 | None | SAMN02419634 | Pre-XDR-TB | lineage2.2.1 | by | ERR4818866 | Sensitive | lineage4.6.1.1 | None | SAMN02419611 | Pre-XDR-TB | lineage2.2.1 | by | SRR25340915 | Sensitive | lineage3.1.2 | None | ERR11044171 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828550 | MDR-TB | lineage2.2.1 | None | SRR23861752 | MDR-TB | lineage2.2.1 | None | ERR11773826 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050858 | MDR-TB | lineage2.2.1 | None | ERR5866546 | MDR-TB | lineage2.2.1 | None | ERR6866447 | Sensitive | lineage4.1.2.1 | None | DRR184945 | Sensitive | lineage2.2.1 | vn | SRR5065339 | MDR-TB | lineage2.2.1 | vn | SRR28498693 | MDR-TB | lineage4.2.1 | None | ERR5866342 | MDR-TB | lineage2.2.1 | None | ERR5866343 | MDR-TB | lineage2.2.1 | None | ERR1199044 | Sensitive | lineage4.6.1.1 | None | SRR5067250 | Sensitive | lineage2.2.1 | vn | SRR5074170 | HR-TB | lineage2.2.1 | vn | ERR5865284 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865477 | MDR-TB | lineage2.2.1 | None | SRR784917 | Pre-XDR-TB | lineage3 | None | SRR16370508 | MDR-TB | lineage4.3.3 | None | SRR1049734 | Pre-XDR-TB | lineage3 | None | SRR25389550 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801970 | MDR-TB | lineage2.2.1 | None | ERR2512463 | Sensitive | lineage3 | gb | SRR21747065 | MDR-TB | lineage2.2.2 | None | ERR2515612 | MDR-TB | lineage4.8.1 | za | ERR5864824 | Pre-XDR-TB | lineage2.2.1 | None | SRR14807652 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827756 | MDR-TB | lineage2.2.1 | None | SRR6785176 | Sensitive | lineage4.1.2.1 | None | SRR26399915 | HR-TB | lineage2.2.1 | None | SRR15723128 | HR-TB | lineage2.2.1 | None | ERR552147_ERR552148 | MDR-TB | lineage2.2.1 | None | SRR20969659 | Pre-XDR-TB | lineage2.2.1 | None | SRR5338516 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305774 | Sensitive | lineage2.2.1 | None | SRR1196544 | RR-TB | lineage4.3.2.1 | None | ERR5865652 | MDR-TB | lineage2.2.1 | None | ERR5865945 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861713 | RR-TB | lineage4.8 | None | ERR552148 | MDR-TB | lineage2.2.1 | None | ERR9786480 | Other | lineage4.3.4.1 | None | ERR9119598 | MDR-TB | lineage5 | None | SRR18715339 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832245 | Sensitive | lineage4.1.2.1 | None | SRR1003104 | Pre-XDR-TB | lineage2.2.2 | None | SRR28858606 | Sensitive | lineage3.1 | None | SRR1723998 | MDR-TB | lineage4.4 | cn | SRR1723816 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13195541 | MDR-TB | lineage2.2.2 | None | SRR1723955 | MDR-TB | lineage4.5 | cn | SRR1723638 | Pre-XDR-TB | lineage2.2.1 | cn | SRR14801612 | MDR-TB | lineage2.2.1 | None | SRR12142322 | MDR-TB | lineage2.2.1 | None | SRR26936956 | MDR-TB | lineage2.2.1 | None | SRR16370372 | Other | lineage2.2.1 | None | SRR29093297 | MDR-TB | lineage4.2.2.2 | None | SRR27332306 | Sensitive | lineage4.6.3 | None | SRR29914425 | MDR-TB | lineage2.2.1 | None | SRR7069115 | Sensitive | lineage4.6.1.1 | None | ERR11243594 | Sensitive | lineage4.8 | None | ERR13439884 | HR-TB | lineage2.2.1 | None | ERR5866418 | MDR-TB | lineage2.2.1 | None | ERR5866135 | MDR-TB | lineage2.2.1 | None | ERR11068412 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748283 | MDR-TB | lineage4.4.1.1 | None | SRR1165626 | MDR-TB | lineage4.8.1 | None | SRR1368332 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553553 | MDR-TB | lineage1.2.2.2 | None | SRR25207155 | MDR-TB | lineage2.2.1 | None | ERR11081339 | MDR-TB | lineage4.2.1 | None | SRR7516393 | MDR-TB | lineage2.2.1 | None | ERR13261556 | Sensitive | lineage3.1.2.1 | None | SRR1163021 | Pre-XDR-TB | lineage2.2.1 | None | SRR21576537 | MDR-TB | lineage2.1 | None | ERR13285101 | MDR-TB | lineage4.2.1 | None | SRR10397194 | MDR-TB | lineage2.2.1 | None | ERR4813627 | MDR-TB | lineage4.3.3 | None | ERR4813714 | MDR-TB | lineage4.3.3 | None | ERR5865281 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515569 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832044 | Sensitive | lineage2.2.1 | None | SRR1173193 | RR-TB | lineage4.3.2.1 | None | SRR24673516 | MDR-TB | lineage2.2.1 | None | ERR7764398 | Sensitive | lineage4.1.2.1 | None | SRR15315933 | MDR-TB | lineage2.2.1 | None | ERR4811832 | MDR-TB | lineage4.3.3 | None | ERR5865439 | MDR-TB | lineage2.2.1 | None | ERR114440 | HR-TB | lineage3 | None | ERR5865476 | MDR-TB | lineage2.2.1 | None | ERR13290706 | Pre-XDR-TB | lineage2.2.1 | None | SRR15723112 | HR-TB | lineage2.2.1 | None | ERR2179669 | MDR-TB | lineage4.4 | cn | SRR15368903 | Other | lineage2.2.1 | None | SRR1723773 | Sensitive | lineage2.2.1 | cn | SRR27980481 | Sensitive | lineage4.1.2 | None | ERR13285022 | MDR-TB | lineage2.2.1 | None | SRR1169033 | Pre-XDR-TB | lineage2.2.1 | None | DRR188743 | MDR-TB | lineage2.2.1 | None | ERR550851 | MDR-TB | lineage2.2.1 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832463 | MDR-TB | lineage2.2.1 | None | SRR14782766 | Sensitive | lineage4.2 | None | SRR6785445 | Sensitive | lineage4.3.3 | None | ERR4813688 | MDR-TB | lineage4.3.3 | None | ERR5865756 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207361 | MDR-TB | lineage2.2.1 | None | SRR29055996 | Other | lineage2.2.1 | None | ERR11043129 | MDR-TB | lineage4.2.1 | None | SRR18715165 | MDR-TB | lineage2.2.1 | None | ERR4423548 | MDR-TB | lineage4.1.3 | None | SRR1169125 | MDR-TB | lineage4.8.1 | None |
|---|
