lineage | Count |
---|---|
lineage1.1.1 | 108 |
lineage2.2.1 | 6 |
lineage2.1 | 2 |
lineage4 | 33 |
lineage4.9 | 4 |
21 | |
lineage2.2.1.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage2.2.1;lineage1.1.1 | 1 |
lineage4;lineage1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 179 |
ID | Drug resistance | Lineage | Country iso2 | SRR11662395 | MDR-TB | lineage1.1.1 | None | SRR11662217 | MDR-TB | lineage1.1.1 | None | SRR11662215 | MDR-TB | lineage1.1.1 | None | SRR17729362 | Sensitive | lineage1.1.1 | None | SRR17729392 | Sensitive | lineage1.1.1 | None | SRR17729386 | Sensitive | lineage1.1.1 | None | SRR17729395 | Sensitive | lineage1.1.1 | None | SRR17729380 | Sensitive | lineage1.1.1 | None | SRR17729396 | Sensitive | lineage1.1.1 | None | SRR17729399 | Sensitive | lineage1.1.1 | None | SRR17729413 | Sensitive | lineage1.1.1 | None | SRR17729419 | Sensitive | lineage1.1.1 | None | SRR21676422 | Sensitive | lineage1.1.1 | None | ERR12328184 | Other | lineage1.1.1 | None | ERR11068307 | Sensitive | lineage1.1.1 | None | SRR26399590 | Sensitive | lineage1.1.1 | None | SRR26937136 | MDR-TB | lineage1.1.1 | None | SRR27450514 | Sensitive | lineage1.1.1 | None | SRR5709797 | Pre-XDR-TB | lineage2.2.1 | th | ERR4815400 | Other | lineage1.1.1 | None | ERR12328191 | Sensitive | lineage1.1.1 | None | ERR12328178 | Sensitive | lineage1.1.1 | None | SRR27450583 | Sensitive | lineage1.1.1 | None | ERR233363 | Sensitive | lineage1.1.1 | None | ERR4815678 | HR-TB | lineage1.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR5709957 | Sensitive | lineage1.1.1 | th | SRR5709944 | Sensitive | lineage1.1.1 | th | SRR5709819 | MDR-TB | lineage1.1.1 | th | SRR3675246 | Sensitive | lineage4 | None | SRR5709758 | Pre-XDR-TB | lineage1.1.1 | th | SRR5709916 | MDR-TB | lineage1.1.1 | th | SRR5073604 | Sensitive | lineage1.1.1 | vn | ERR718223 | Sensitive | lineage1.1.1 | th | SRR5341384 | Sensitive | lineage4.9 | None | ERR752019 | Sensitive | lineage1.1.1 | th | ERR768014 | Sensitive | lineage1.1.1 | th | ERR751803 | HR-TB | lineage1.1.1 | th | ERR752102 | Sensitive | lineage1.1.1 | th | ERR751982 | Sensitive | lineage1.1.1 | th | ERR751717 | Sensitive | lineage1.1.1 | th | ERR752238 | Other | lineage1.1.1 | th | ERR718322 | Sensitive | lineage1.1.1 | th | ERR752058 | Sensitive | lineage1.1.1 | th | ERR751707 | Sensitive | lineage1.1.1 | th | SRR5065704 | Sensitive | lineage1.1.1 | vn | ERR718285 | Sensitive | lineage1.1.1 | th | ERR752244 | Sensitive | lineage1.1.1 | th | ERR768025 | HR-TB | lineage1.1.1 | th | ERR718371 | Sensitive | lineage1.1.1 | th | SRR5067583 | Sensitive | lineage1.1.1 | vn | ERR768049 | Sensitive | lineage1.1.1 | th | ERR718418 | Sensitive | lineage1.1.1 | th | ERR718447 | Sensitive | lineage1.1.1 | th | ERR718197 | Sensitive | lineage1.1.1 | th | ERR751823 | Sensitive | lineage1.1.1 | th | ERR718286 | Sensitive | lineage1.1.1 | th | ERR718445 | RR-TB | lineage1.1.1 | th | ERR752069 | Sensitive | lineage1.1.1 | th | ERR752003 | Sensitive | lineage1.1.1 | th | ERR718421 | Sensitive | lineage1.1.1 | th | ERR767986 | Sensitive | lineage1.1.1 | th | ERR718487 | Sensitive | lineage1.1.1 | th | ERR751880 | Sensitive | lineage1.1.1 | th | SRR5073901 | Sensitive | lineage1.1.1 | vn | ERR775797 | Sensitive | lineage1.1.1 | th | SRR5341453 | Sensitive | None | ERR846994 | Sensitive | lineage1.1.1 | th | ERR751909 | Sensitive | lineage1.1.1 | th | SRR5073967 | Sensitive | lineage1.1.1 | vn | ERR718229 | Sensitive | lineage1.1.1 | th | SRR5341387 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR751927 | Sensitive | lineage1.1.1 | th | ERR1023354 | Sensitive | lineage1.1.1 | None | ERR718390 | Sensitive | lineage1.1.1 | th | ERR775781 | Sensitive | lineage1.1.1 | th | SRR5341425 | Other | lineage4 | None | ERR752018 | Sensitive | lineage1.1.1 | th | ERR751808 | Sensitive | lineage1.1.1 | th | ERR752067 | Sensitive | lineage1.1.1 | th | ERR752285 | Sensitive | lineage1.1.1 | th | ERR752161 | Sensitive | lineage1.1.1 | th | ERR767975 | Sensitive | lineage1.1.1 | th | ERR4819429 | HR-TB | lineage1.1.1 | None | SRR5341300 | Other | lineage4 | None | ERR752170 | Sensitive | lineage1.1.1 | th | ERR752133 | Sensitive | lineage1.1.1 | th | SRR5341455 | Sensitive | lineage4 | None | SRR6153193 | HR-TB | lineage1.1.1 | ca | SRR5341298 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR4821316 | HR-TB | lineage1.1.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR2516456 | Sensitive | lineage1.1.1 | pe | SRR6339638 | Sensitive | lineage1.1.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4819606 | Other | lineage1.1.1 | gb | ERR4817466 | Other | lineage1.1.1 | gb | ERR502510 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR1035122 | Sensitive | None | ERR3273109 | MDR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR2513203 | Sensitive | lineage1.1.1 | gb | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR392510 | Sensitive | lineage1.1.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4188247 | HR-TB | None | ERR4024991 | Other | None | ERR4798099 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR2514371 | Sensitive | lineage1.1.1 | gb | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4828351 | HR-TB | lineage2.2.1;lineage1.1.1 | vn | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6866639 | Other | None | ERR6866022 | Other | None | ERR4811493 | HR-TB | None | ERR736848 | HR-TB | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR736834 | Sensitive | lineage4 | None | SRR22251977 | Sensitive | lineage1.1.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR21732782 | Sensitive | lineage1.1.1 | None | ERR736856 | HR-TB | lineage4 | None | SRR21732762 | Sensitive | lineage1.1.1 | None | ERR7902678 | HR-TB | lineage1.1.1 | None | SRR21732082 | Sensitive | lineage1.1.1 | None | SRR22251538 | Sensitive | lineage1.1.1 | None | SRR21732223 | Other | lineage1.1.1 | None | SRR11662532 | MDR-TB | lineage1.1.1 | None | SRR21732625 | Sensitive | lineage1.1.1 | None | SRR11662202 | MDR-TB | lineage1.1.1 | None | SRR11662615 | MDR-TB | lineage1.1.1 | None | SRR22249665 | Sensitive | lineage1.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR11662600 | MDR-TB | lineage1.1.1 | None | SRR11662170 | MDR-TB | lineage1.1.1 | None | SRR11662133 | MDR-TB | lineage1.1.1 | None | SRR11662489 | MDR-TB | lineage1.1.1 | None | SRR12199439 | HR-TB | lineage4;lineage1.1.1 | None | SRR12882054 | Sensitive | lineage1.1.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR16370450 | HR-TB | lineage1.1.1 | None |
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