lineage | Count |
---|---|
lineage1.1.1 | 115 |
La3;lineage4.9 | 5 |
lineage4.9 | 39 |
lineage2.2.1 | 3 |
1 | |
lineage4 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.9;lineage7 | 1 |
lineage1.1.1;lineage2.2.1 | 2 |
spoligotype | Count |
---|---|
None | 169 |
ID | Drug resistance | Lineage | Country iso2 | SRR17729399 | Sensitive | lineage1.1.1 | None | ERR718418 | Sensitive | lineage1.1.1 | th | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR27450514 | Sensitive | lineage1.1.1 | None | ERR718487 | Sensitive | lineage1.1.1 | th | SRR5709957 | Sensitive | lineage1.1.1 | th | SRR5073901 | Sensitive | lineage1.1.1 | vn | ERR752238 | Other | lineage1.1.1 | th | ERR926159 | Sensitive | lineage4.9 | None | ERR718322 | Sensitive | lineage1.1.1 | th | ERR926154 | Sensitive | lineage4.9 | None | ERR752067 | Sensitive | lineage1.1.1 | th | SRR5341308 | Sensitive | lineage4.9 | None | SRR17729380 | Sensitive | lineage1.1.1 | None | ERR751909 | Sensitive | lineage1.1.1 | th | ERR767986 | Sensitive | lineage1.1.1 | th | ERR736834 | Sensitive | lineage4.9 | None | ERR718390 | Sensitive | lineage1.1.1 | th | SRR5709916 | MDR-TB | lineage1.1.1 | th | SRR21732625 | Sensitive | lineage1.1.1 | None | SRR22251977 | Sensitive | lineage1.1.1 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR29124323 | Sensitive | lineage1.1.1 | None | ERR2513203 | Sensitive | lineage1.1.1 | gb | SRR5065704 | Other | lineage1.1.1 | vn | SRR3724943 | Sensitive | lineage1.1.1 | None | ERR13290898 | MDR-TB | lineage2.2.1 | None | SRR5709819 | MDR-TB | lineage1.1.1 | th | SRR11662202 | MDR-TB | lineage1.1.1 | None | ERR718197 | Sensitive | lineage1.1.1 | th | ERR323062 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR718286 | Sensitive | lineage1.1.1 | th | ERR233363 | Sensitive | lineage1.1.1 | None | ERR768025 | HR-TB | lineage1.1.1 | th | ERR1063896 | Sensitive | None | ERR718229 | Sensitive | lineage1.1.1 | th | SRR6339638 | Sensitive | lineage1.1.1 | None | ERR4821316 | HR-TB | lineage1.1.1 | None | SRR11662217 | MDR-TB | lineage1.1.1 | None | ERR12328191 | Sensitive | lineage1.1.1 | None | SRR27450583 | Sensitive | lineage1.1.1 | None | SRR21732782 | Sensitive | lineage1.1.1 | None | ERR751982 | Sensitive | lineage1.1.1 | th | ERR4819429 | HR-TB | lineage1.1.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR718421 | Sensitive | lineage1.1.1 | th | ERR718268 | Sensitive | lineage1.1.1 | None | ERR751707 | Sensitive | lineage1.1.1 | th | ERR926160 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR11662532 | MDR-TB | lineage1.1.1 | None | ERR392510 | Other | lineage1.1.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR4815400 | Other | lineage1.1.1 | None | ERR846994 | Sensitive | lineage1.1.1 | th | SRR11662615 | MDR-TB | lineage1.1.1 | None | SRR21676422 | Sensitive | lineage1.1.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR768014 | Sensitive | lineage1.1.1 | th | ERR926164 | Other | lineage4.9 | None | SRR17729419 | Sensitive | lineage1.1.1 | None | ERR752244 | Sensitive | lineage1.1.1 | th | ERR718445 | RR-TB | lineage1.1.1 | th | ERR4819606 | Other | lineage1.1.1 | gb | SRR5709758 | Pre-XDR-TB | lineage1.1.1 | th | SRR5341299 | HR-TB | lineage4.9 | None | ERR7902678 | HR-TB | lineage1.1.1 | None | ERR718223 | Sensitive | lineage1.1.1 | th | ERR4811493 | HR-TB | lineage4.9 | None | SRR5709944 | Sensitive | lineage1.1.1 | th | SRR24083613 | Sensitive | lineage1.1.1 | None | SRR28776755 | Other | lineage1.1.1 | None | SRR11662133 | MDR-TB | lineage1.1.1 | None | ERR12328178 | Sensitive | lineage1.1.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR751880 | Sensitive | lineage1.1.1 | th | ERR752133 | Sensitive | lineage1.1.1 | th | SRR5073967 | Sensitive | lineage1.1.1 | vn | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR21732762 | Sensitive | lineage1.1.1 | None | ERR752058 | Sensitive | lineage1.1.1 | th | ERR926162 | Sensitive | lineage4.9 | None | ERR752003 | Sensitive | lineage1.1.1 | th | ERR752102 | Sensitive | lineage1.1.1 | th | ERR751808 | Sensitive | lineage1.1.1 | th | ERR502510 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR21732223 | Other | lineage1.1.1 | None | SRR22249665 | Sensitive | lineage1.1.1 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR11662489 | MDR-TB | lineage1.1.1 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR751927 | Sensitive | lineage1.1.1 | th | SRR16370450 | HR-TB | lineage1.1.1 | None | ERR718285 | Sensitive | lineage1.1.1 | th | ERR718447 | Sensitive | lineage1.1.1 | th | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR751326 | Other | lineage4.9 | None | ERR2516456 | Sensitive | lineage1.1.1 | pe | ERR752161 | Sensitive | lineage1.1.1 | th | SRR11662215 | MDR-TB | lineage1.1.1 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR11068307 | Sensitive | lineage1.1.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR26399590 | Sensitive | lineage1.1.1 | None | SRR29441046 | Sensitive | lineage1.1.1 | None | ERR775781 | Sensitive | lineage1.1.1 | th | SRR17729362 | Sensitive | lineage1.1.1 | None | ERR752069 | Sensitive | lineage1.1.1 | th | ERR752285 | Sensitive | lineage1.1.1 | th | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR752170 | Sensitive | lineage1.1.1 | th | ERR768049 | Sensitive | lineage1.1.1 | th | ERR775797 | Sensitive | lineage1.1.1 | th | SRR3725361 | HR-TB | lineage1.1.1 | None | SRR29604869 | Sensitive | lineage1.1.1 | None | ERR752019 | Sensitive | lineage1.1.1 | th | SRR17729392 | Sensitive | lineage1.1.1 | None | SRR17729395 | Sensitive | lineage1.1.1 | None | SRR17729396 | Sensitive | lineage1.1.1 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR11662170 | MDR-TB | lineage1.1.1 | None | ERR751803 | HR-TB | lineage1.1.1 | th | SRR22251538 | Sensitive | lineage1.1.1 | None | SRR5073604 | Sensitive | lineage1.1.1 | vn | SRR7535082 | Sensitive | lineage4.9 | None | SRR29050820 | HR-TB | lineage1.1.1;lineage2.2.1 | None | ERR926155 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR3724780 | Sensitive | lineage1.1.1 | None | ERR137286 | Other | lineage4.9 | None | ERR4828351 | HR-TB | lineage1.1.1;lineage2.2.1 | vn | SRR5709797 | Pre-XDR-TB | lineage2.2.1 | th | SRR6153193 | HR-TB | lineage1.1.1 | ca | SRR26937136 | MDR-TB | lineage1.1.1 | None | ERR767975 | Sensitive | lineage1.1.1 | th | ERR2514371 | Sensitive | lineage1.1.1 | gb | ERR718371 | Sensitive | lineage1.1.1 | th | ERR752018 | Sensitive | lineage1.1.1 | th | SRR5067583 | Sensitive | lineage1.1.1 | vn | ERR702405 | Sensitive | lineage4.9 | None | ERR751717 | Sensitive | lineage1.1.1 | th | ERR1023354 | Sensitive | lineage1.1.1 | None | ERR751823 | Sensitive | lineage1.1.1 | th | SRR17729386 | Sensitive | lineage1.1.1 | None | SRR17729413 | Sensitive | lineage1.1.1 | None | ERR736848 | Other | lineage4.9 | None | ERR4817466 | Other | lineage1.1.1 | gb | SRR11662395 | MDR-TB | lineage1.1.1 | None | ERR4815678 | HR-TB | lineage1.1.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR12328184 | Other | lineage1.1.1 | None | SRR29096971 | Sensitive | lineage1.1.1 | None | SRR11662694 | Other | lineage4.9 | None | SRR21732082 | Sensitive | lineage1.1.1 | None | ERR124636 | Sensitive | lineage4.9 | None |
---|