lineage | Count |
---|---|
67 | |
lineage4.3.3 | 2 |
lineage4 | 2 |
lineage3.1 | 2 |
lineage2.2.1 | 4 |
lineage2 | 2 |
La1.2.BCG | 1 |
lineage4.9 | 4 |
lineage6.3;lineage2.2.1 | 1 |
lineage2.1 | 1 |
lineage4.8 | 1 |
lineage2.2 | 1 |
La1.8.1 | 1 |
La1.7.1 | 1 |
lineage4.3.2 | 1 |
spoligotype | Count |
---|---|
None | 91 |
ID | Drug resistance | Lineage | Country iso2 | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13399337 | Other | La1.2.BCG | None | SRR26159043 | Other | lineage4.9 | None | SRR15368973 | Other | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR4815604 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4816466 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675221 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | ERR4817037 | Other | lineage4.9 | None | ERR212121 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675311 | Other | None | ERR4817060 | RR-TB | None | SRR3675574 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | SRR5341302 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | SRR6045555 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045399 | Other | None | SRR6789626 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046540 | HR-TB | None | SRR7496517 | Other | None | ERR502532 | HR-TB | None | ERR323043 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3587591 | Other | La1.7.1 | None | ERR4810741 | HR-TB | None | ERR3797069 | Other | None | ERR3797036 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR736839 | Other | None | ERR5336148 | Other | None | ERR702406 | HR-TB | None | ERR6359045 | HR-TB | None | ERR702404 | HR-TB | None | ERR736867 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR736874 | HR-TB | None |
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