Rv2428 - c.-48G>A
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
150 HR-TB
368 MDR-TB
319 Pre-XDR-TB
37 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 181 |
| lineage4.2.2.2 | 22 |
| lineage4.1.1.3 | 278 |
| La1.8;lineage4.3.2 | 1 |
| lineage4.3.2 | 3 |
| lineage1.2.1.2.1 | 7 |
| lineage4.3.3 | 22 |
| lineage4.1.2.1 | 63 |
| lineage4.3.4.2 | 13 |
| lineage2.2.1.1 | 8 |
| lineage4.8 | 44 |
| lineage4.5 | 22 |
| lineage4.4.2 | 16 |
| lineage4.2.1 | 56 |
| lineage4.2.2 | 5 |
| lineage2.2.2 | 24 |
| lineage1.1.3.1 | 3 |
| lineage4.4.1.1 | 4 |
| lineage4.1.3 | 4 |
| lineage4.6.1.1 | 3 |
| lineage4.1.1.1 | 2 |
| lineage4.3.4.2.1 | 7 |
| lineage1.1.1.1 | 4 |
| lineage1.1.2;lineage4.3.4.2.1 | 1 |
| lineage2.2.1.1;lineage4.1.1.3 | 1 |
| lineage4.1 | 2 |
| lineage4.1.2 | 6 |
| lineage6.2.3 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.4 | 2 |
| lineage4.9 | 17 |
| lineage4.6.1.2 | 4 |
| lineage5.1.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.1.1;lineage4.4.1.1 | 1 |
| lineage1.2.2.1 | 2 |
| lineage4 | 5 |
| lineage4.3.4.1 | 2 |
| lineage4.4.1 | 1 |
| lineage2.2.2;lineage4.1.1.3 | 3 |
| lineage6.2.2 | 3 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage4.1.1.3;lineage4.1.2 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.7 | 2 |
| lineage4.1.4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage3;lineage4.1.1.3 | 1 |
| lineage6.3.1 | 3 |
| lineage4.1.2.1;lineage4.3.4.2 | 1 |
| lineage4.1.1 | 2 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.4 | 1 |
| lineage6.2.1 | 1 |
| lineage5.2 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage4.3.3;lineage4.8 | 1 |
| lineage4.1.1.3;lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 874 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4827541 | HR-TB | lineage2.2.1 | None | ERR5866428 | HR-TB | lineage2.2.1 | None | ERR5866429 | MDR-TB | lineage2.2.1 | None | SRR25515163 | MDR-TB | lineage2.2.1 | None | SRR070017 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737735 | MDR-TB | lineage4.2.2.2 | None | ERR126642 | HR-TB | lineage4.1.1.3 | mw | SRR6930892 | Pre-XDR-TB | La1.8;lineage4.3.2 | None | SRR29016992 | HR-TB | lineage4.3.2 | None | SRR29053314 | HR-TB | lineage1.2.1.2.1 | None | ERR11082633 | HR-TB | lineage4.3.3 | None | SRR1723877 | MDR-TB | lineage2.2.1 | cn | ERR10680027 | MDR-TB | lineage4.1.2.1 | None | ERR9806966 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29055562 | Pre-XDR-TB | lineage4.1.1.3 | None | DRR474015 | HR-TB | lineage2.2.1 | None | SRR29093813 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29772763 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093788 | MDR-TB | lineage4.3.4.2 | None | SRR29539089 | HR-TB | lineage2.2.1 | None | SRR29093245 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869197 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13261396 | Pre-XDR-TB | lineage2.2.1 | None | ERR7162974 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385510 | MDR-TB | lineage2.2.1 | None | SRR12142322 | MDR-TB | lineage2.2.1 | None | SRR22251883 | HR-TB | lineage2.2.1.1 | None | SRR29096883 | MDR-TB | lineage4.1.1.3 | None | SRR12420790 | HR-TB | lineage2.2.1 | None | ERR9121531 | HR-TB | lineage4.8 | None | SRR29093367 | MDR-TB | lineage4.5 | None | SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None | ERR9030510 | MDR-TB | lineage2.2.1 | None | SRR23340007 | MDR-TB | lineage4.2.1 | None | SRR29772776 | MDR-TB | lineage4.2.2 | None | ERR4831528 | MDR-TB | lineage4.1.1.3 | None | ERR4831558 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29094459 | MDR-TB | lineage4.1.2.1 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | ERR553095 | MDR-TB | lineage4.1.2.1 | None | SAMN03246299 | MDR-TB | lineage2.2.1 | cn | SRR10513832 | Pre-XDR-TB | lineage2.2.1 | None | ERR13258386 | MDR-TB | lineage2.2.1 | None | SRR15316288 | HR-TB | lineage2.2.1 | None | SRR16156719 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13290750 | HR-TB | lineage2.2.2 | None | ERR11081339 | MDR-TB | lineage4.2.1 | None | ERR5866286 | Pre-XDR-TB | lineage4.8 | None | ERR9806869 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025711 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR21277260 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025573 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025703 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR8651581 | Pre-XDR-TB | lineage4.5 | None | ERR4011940 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093988 | MDR-TB | lineage4.2.2.2 | None | SRR15316480 | MDR-TB | lineage2.2.1 | None | SRR29093310 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR386971 | MDR-TB | lineage4.1.2.1 | None | SRR29096872 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10680048 | MDR-TB | lineage4.1.1.3 | None | SRR29093856 | MDR-TB | lineage4.1.1.3 | None | ERR551829 | MDR-TB | lineage2.2.1 | None | SRR29055693 | MDR-TB | lineage2.2.1 | None | ERR4553881 | MDR-TB | lineage1.1.3.1 | None | SRR23340143 | Pre-XDR-TB | lineage4.2.1 | None | ERR7737796 | MDR-TB | lineage4.2.2.2 | None | SRR3103514 | HR-TB | lineage4.4.1.1 | None | SRR11662250 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872255 | MDR-TB | lineage4.1.2.1 | None | SRR16156240 | MDR-TB | lineage4.1.1.3 | None | SRR29056327 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096311 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093248 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096577 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9993083 | XDR-TB | lineage4.1.1.3 | None | SRR16156859 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9807012 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869213 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093538 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11488629 | MDR-TB | lineage2.2.1 | None | SRR16156747 | MDR-TB | lineage4.1.1.3 | None | SRR29094084 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11488672 | MDR-TB | lineage2.2.1 | None | ERR10748158 | XDR-TB | lineage4.1.1.3 | None | ERR13232609 | MDR-TB | lineage2.2.2 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9993230 | XDR-TB | lineage4.1.1.3 | None | SRR10869284 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3273103 | MDR-TB | lineage2.2.2 | None | SRR29093183 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR25207157 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420751 | HR-TB | lineage2.2.1 | None | ERR3273089 | MDR-TB | lineage4.5 | None | SRR12416833 | MDR-TB | lineage2.2.1 | None | ERR9119286 | HR-TB | lineage2.2.1 | None | ERR10680000 | MDR-TB | lineage4.1.3 | None | SRR7068967 | MDR-TB | lineage4.2.1 | None | ERR11775865 | HR-TB | lineage4.6.1.1 | None | SRR29093327 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR23339985 | MDR-TB | lineage4.2.1 | None | ERR9806953 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR12544194 | MDR-TB | lineage4.3.3 | None | ERR11488392 | MDR-TB | lineage4.1.1.1 | None | ERR7362011 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806866 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9807004 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093339 | MDR-TB | lineage4.1.1.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR2124097 | HR-TB | lineage4.3.4.2.1 | None | SRR23340136 | MDR-TB | lineage4.2.1 | None | SRR23340058 | MDR-TB | lineage4.2.1 | None | SRR22175223 | Pre-XDR-TB | lineage4.8 | None | SRR29055594 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR21031697 | HR-TB | lineage2.2.1 | None | ERR550827 | MDR-TB | lineage4.1.2.1 | None | SRR12420343 | Pre-XDR-TB | lineage4.5 | None | SRR6855833 | HR-TB | lineage4.1.2.1 | None | ERR3273104 | MDR-TB | lineage4.3.3 | None | ERR13284846 | MDR-TB | lineage4.8 | None | SRR26056455 | MDR-TB | lineage4.1.2.1 | None | ERR9806944 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11082720 | HR-TB | lineage4.8 | None | ERR13267526 | MDR-TB | lineage4.2.1 | None | ERR10748318 | MDR-TB | lineage4.1.1.3 | None | ERR10748320 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR22461590 | HR-TB | lineage2.2.1 | None | ERR13276408 | MDR-TB | lineage4.2.1 | None | SRR29093580 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29055522 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR5153604 | MDR-TB | lineage4.2.2 | None | SRR29055524 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29772471 | Pre-XDR-TB | lineage4.8 | None | ERR13261220 | Pre-XDR-TB | lineage4.3.3 | None | SRR21887670 | Pre-XDR-TB | lineage2.2.1 | None | ERR6362206 | MDR-TB | lineage4.1.1.3 | None | SRR29093191 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR23340034 | MDR-TB | lineage4.2.1 | None | ERR1034990 | MDR-TB | lineage4.1.1.3 | za | SRR10869158 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11050191 | HR-TB | lineage4.1.2.1 | None | SRR1048861 | Pre-XDR-TB | lineage2.2.2 | None | ERR4011941 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13284983 | MDR-TB | lineage1.1.1.1 | None | ERR4423566 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869234 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR17657949 | HR-TB | lineage1.1.2;lineage4.3.4.2.1 | None | ERR13261338 | Pre-XDR-TB | lineage4.8 | None | ERR9806952 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR25207025 | MDR-TB | lineage4.5 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | ERR4011938 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093550 | Pre-XDR-TB | lineage4.1.1.3 | None | DRR473831 | HR-TB | lineage4.2.2 | None | SRR16156738 | MDR-TB | lineage2.2.1.1;lineage4.1.1.3 | None | ERR9119693 | MDR-TB | lineage4.1.1.3 | None | SRR29341463 | HR-TB | lineage4.4.1.1 | None | SRR1723534 | MDR-TB | lineage2.2.1 | None | SRR21576587 | MDR-TB | lineage4.4.2 | None | ERR11082702 | MDR-TB | lineage4.8 | None | ERR9806971 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1035037 | MDR-TB | lineage4.1.1.3 | za | SRR29096200 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6930934 | Pre-XDR-TB | lineage4.1 | None | SRR27069425 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775525 | HR-TB | lineage4.3.4.2 | None | ERR551467 | MDR-TB | lineage2.2.1 | None | ERR3148182 | MDR-TB | lineage2.2.1 | mx | ERR2099777 | MDR-TB | lineage4.1.2.1 | es | ERR4796649 | MDR-TB | lineage4.1.2.1 | in | ERR7801216 | HR-TB | lineage4.3.4.2.1 | None | SRR16156200 | MDR-TB | lineage4.1.1.3 | None | SRR7592360 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4796618 | MDR-TB | lineage4.2.2.2 | in | SRR28868836 | Pre-XDR-TB | lineage4.8 | None | ERR4553980 | HR-TB | lineage2.2.1 | None | ERR4797017 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR10748165 | XDR-TB | lineage4.1.1.3 | None | SRR15316250 | HR-TB | lineage4.4.2 | None | SRR22251463 | HR-TB | lineage1.2.1.2.1 | None | ERR551501_ERR551500_ERR551499 | MDR-TB | lineage2.2.1 | None | ERR551501 | MDR-TB | lineage2.2.1 | None | ERR552196 | MDR-TB | lineage4.1.2.1 | None | ERR550826 | MDR-TB | lineage4.1.2.1 | None | ERR3273147 | MDR-TB | lineage2.2.1.1 | None | ERR11488863 | MDR-TB | lineage4.1.2 | None | SRR29051506 | HR-TB | lineage4.4.1.1 | None | ERR4797823 | Pre-XDR-TB | lineage4.8 | in | ERR4800572 | Pre-XDR-TB | lineage4.8 | in | SRR29093456 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4799311 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR1013561 | Pre-XDR-TB | lineage2.2.2 | None | SRR29051051 | MDR-TB | lineage4.1.2.1 | None | ERR11081059 | MDR-TB | lineage4.2.1 | None | ERR11252396 | HR-TB | lineage4.3.4.2 | None | SRR18003010 | MDR-TB | lineage2.2.1.1 | None | ERR10680108 | MDR-TB | lineage6.2.3 | None | SRR27069435 | MDR-TB | lineage2.2.1 | None | ERR10748448 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4798189 | Pre-XDR-TB | lineage4.8 | in | ERR9806925 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806931 | MDR-TB | lineage4.1.1.3 | None | ERR9806962 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806939 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29055542 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6356974 | MDR-TB | lineage2.2.1 | None | SRR3085295 | MDR-TB | lineage2.2.1 | None | ERR4813771 | HR-TB | lineage4.8 | None | ERR4798329 | MDR-TB | lineage4.2.2.2 | in | SRR29093214 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025508 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4796595 | Pre-XDR-TB | lineage4.8 | in | ERR4797028 | Pre-XDR-TB | lineage1.1.2 | in | SRR29056301 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR23340142 | MDR-TB | lineage4.2.1 | None | SRR29017340 | HR-TB | lineage4.3.4 | None | SRR29358145 | HR-TB | lineage4.9 | None | SRR23340139 | MDR-TB | lineage4.2.1 | None | ERR987786 | MDR-TB | lineage4.6.1.2 | None | ERR2707058 | MDR-TB | lineage4.9 | cd | SRR5709881 | MDR-TB | lineage2.2.1 | th | SAMN02360602 | MDR-TB | lineage4.4.2 | kr | ERR987748 | MDR-TB | lineage4.6.1.2 | None | SRR29231675 | MDR-TB | lineage4.9 | None | ERR4822365 | MDR-TB | lineage2.2.1 | None | ERR439973 | MDR-TB | lineage5.1.4 | None | SRR29093674 | MDR-TB | lineage4.1.1.3 | None | ERR2707086 | MDR-TB | lineage4.9 | cd | SRR29231846 | MDR-TB | lineage4.9 | None | SAMN02360620 | Pre-XDR-TB | lineage2.2.2 | kr | SRR21031691 | MDR-TB | lineage2.2.1.1 | None | SRR8651557 | Pre-XDR-TB | lineage4.5 | cn | ERR2707150 | MDR-TB | lineage4.9 | cd | SRR29230774 | MDR-TB | lineage4.9 | None | ERR2497898 | MDR-TB | lineage4.9 | None | SRR1048845 | Pre-XDR-TB | lineage2.2.2 | None | ERR1034639 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR671737 | MDR-TB | lineage2.2.1 | cn | SRR671819 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3287780 | HR-TB | lineage4.8 | pe | SRR28045655 | Pre-XDR-TB | lineage4.8 | None | SRR28467020 | Pre-XDR-TB | lineage2.2.2 | None | SRR6152960 | HR-TB | lineage2.2.2 | ca | ERR718507 | HR-TB | lineage2.2.1 | th | SRR11444106 | HR-TB | lineage4.1.1.3 | None | SRR28351361 | Pre-XDR-TB | lineage4.8 | None | ERR4830989 | Pre-XDR-TB | lineage4.3.3 | np | SRR28339300 | Pre-XDR-TB | lineage2.2.1 | None | SRR6152876 | HR-TB | lineage1.2.1.2.1 | ca | ERR4811336 | MDR-TB | lineage2.2.2 | cn | ERR4813757 | MDR-TB | lineage4.8 | br | SRR2024947 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4011943 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869239 | MDR-TB | lineage4.1.1.3 | None | ERR2653192 | HR-TB | lineage4.3.2 | None | SRR21747060 | MDR-TB | lineage1.2.1.2 | None | ERR11043578 | MDR-TB | lineage4.2.1 | None | ERR4828008 | HR-TB | lineage2.2.1 | None | SRR20969744 | Pre-XDR-TB | lineage4.2.2 | None | ERR9120110 | MDR-TB | lineage4.1.1.3 | None | SRR29096345 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4828009 | HR-TB | lineage2.2.1 | None | SRR1723993 | MDR-TB | lineage4.4.2 | cn | SRR1723548 | MDR-TB | lineage2.2.1 | cn | SRR1723574 | MDR-TB | lineage2.2.1 | None | ERR11067541 | HR-TB | lineage4.3.3 | None | SRR29358136 | HR-TB | lineage4.1.1.3;lineage4.9 | None | SRR29093524 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6930925 | MDR-TB | lineage1.2.1.2.1 | None | SRR29385317 | MDR-TB | lineage2.2.1 | None | SRR29096776 | HR-TB | lineage4.5 | None | SRR28646080 | MDR-TB | lineage4.1.2.1 | None | ERR8773930 | HR-TB | lineage4.8 | None | ERR553290 | MDR-TB | lineage4.1.2.1 | None | SRR29056112 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR26399496 | HR-TB | lineage2.2.1.1;lineage4.4.1.1 | None | SRR1049042 | MDR-TB | lineage4.4.2 | None | ERR9907735 | MDR-TB | lineage4.3.3 | None | SRR29056305 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR029823 | HR-TB | lineage4.2.2.2 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR23340165 | MDR-TB | lineage4.2.1 | None | SRR23340141 | MDR-TB | lineage4.2.1 | None | SRR069929 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316367 | MDR-TB | lineage2.2.1 | None | SRR12708383 | HR-TB | lineage4.3.4.2.1 | None | SRR25515417 | HR-TB | lineage2.2.1 | None | ERR7801214 | HR-TB | lineage4.3.4.2.1 | None | ERR5866285 | Pre-XDR-TB | lineage4.8 | None | SRR7516424 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340062 | MDR-TB | lineage4.2.1 | None | ERR13261138 | Pre-XDR-TB | lineage4.8 | None | SRR13583437 | HR-TB | lineage4.3.3 | None | SRR29093333 | MDR-TB | lineage4.1.1.3 | None | SRR29096358 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13284935 | MDR-TB | lineage4.1.2.1 | None | SRR28394125 | MDR-TB | lineage4.1.2.1 | None | SRR29385253 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043129 | MDR-TB | lineage4.2.1 | None | ERR13284913 | MDR-TB | lineage4.8 | None | ERR13267114 | XDR-TB | lineage2.2.1 | None | ERR551828 | MDR-TB | lineage2.2.1 | None | ERR1873400 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13285101 | MDR-TB | lineage4.2.1 | None | SRR12420594 | Pre-XDR-TB | lineage4.5 | None | ERR9806880 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16058313 | HR-TB | lineage1.2.2.1 | None | ERR13285082 | MDR-TB | lineage4.2.1 | None | ERR10748353 | XDR-TB | lineage4.1.1.3 | None | ERR9806916 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9119599 | MDR-TB | lineage4.1.2.1 | None | ERR13285251 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8773932 | HR-TB | lineage4.8 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR29055545 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9119916 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093662 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR23340158 | MDR-TB | lineage4.2.1 | None | ERR6358865 | HR-TB | lineage4.6.1.1 | None | SRR29093967 | Pre-XDR-TB | lineage4.1.1.3 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SRR29094031 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025664 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9119533 | MDR-TB | lineage4.1.2.1 | None | SRR12420491 | Pre-XDR-TB | lineage4.5 | None | ERR1034655 | MDR-TB | lineage4 | bg | SRR15316481 | Pre-XDR-TB | lineage4.5 | None | SRR16156716 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156282 | XDR-TB | lineage4.1.1.3 | None | SRR29385328 | MDR-TB | lineage2.2.1 | None | SRR29093113 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11081167 | HR-TB | lineage4.3.4.1 | None | ERR13266466 | HR-TB | lineage4.8 | None | SRR7516425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723551 | MDR-TB | lineage2.2.1 | None | ERR4830044 | HR-TB | lineage2.2.1 | None | SRR28393974 | MDR-TB | lineage4.1.2.1 | None | ERR11043265 | MDR-TB | lineage4.8 | None | SRR069952 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011939 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1048844 | Pre-XDR-TB | lineage2.2.2 | None | ERR10112853 | XDR-TB | lineage4.1.1.3 | None | ERR9806876 | MDR-TB | lineage4.1.1.3 | None | ERR9119647 | MDR-TB | lineage4.1.2.1 | None | ERR13288935 | XDR-TB | lineage4.1.1.3 | None | ERR6362393 | MDR-TB | lineage4.1.1.3 | None | ERR7361987 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29056277 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4830039 | HR-TB | lineage2.2.1 | None | SRR23340157 | MDR-TB | lineage4.2.1 | None | SRR29094059 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11080838 | HR-TB | lineage4.3.3 | None | SRR28393992 | MDR-TB | lineage4.3.3 | None | ERR8025662 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13284288 | MDR-TB | lineage4.1.2.1 | None | SRR23340155 | MDR-TB | lineage4.2.1 | None | ERR550654 | MDR-TB | lineage4.1.2.1 | None | ERR13261495 | Pre-XDR-TB | lineage4.8 | None | ERR8773591 | MDR-TB | lineage2.2.1 | None | SRR29385414 | Pre-XDR-TB | lineage4.5 | None | ERR10112890 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025490 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13285252 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156846 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR23340041 | MDR-TB | lineage4.2.1 | None | ERR13289493 | HR-TB | lineage4.2.1 | None | ERR4796985 | MDR-TB | lineage4.2.2.2 | in | SRR29093193 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11567799 | Pre-XDR-TB | lineage4.5 | None | ERR9993065 | XDR-TB | lineage4.1.1.3 | None | SRR26400044 | HR-TB | lineage2.2.1 | None | SRR25207138 | MDR-TB | lineage2.2.1 | None | ERR10610155 | MDR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SAMN02360552 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360560 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360626 | Pre-XDR-TB | lineage2.2.2 | kr | ERR13191623 | MDR-TB | lineage2.2.2 | None | ERR8975422 | HR-TB | lineage4.3.4.2 | None | ERR5866330 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866329 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810954 | MDR-TB | lineage2.2.1 | cn | ERR7737683 | MDR-TB | lineage4.2.2.2 | None | ERR8025725 | Pre-XDR-TB | lineage2.2.1 | None | SRR6152981 | HR-TB | lineage2.2.1 | ca | ERR752233 | HR-TB | lineage4.5 | th | ERR751650 | Pre-XDR-TB | lineage2.2.1 | th | ERR4808942 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR28339299 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809001 | MDR-TB | lineage2.2.1 | za | SRR28045427 | HR-TB | lineage4.3.3 | None | ERR4812954 | HR-TB | lineage4.4.1 | pe | ERR718297 | HR-TB | lineage2.2.1 | th | SRR28394207 | MDR-TB | lineage4 | None | ERR4808876 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7910849 | MDR-TB | lineage4.1.2.1 | pe | ERR7911636 | Pre-XDR-TB | lineage2.2.2;lineage4.1.1.3 | za | ERR502937 | MDR-TB | lineage2.2.1 | None | ERR7911637 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4813749 | HR-TB | lineage4.1.2 | br | ERR9029384 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911663 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911677 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911675 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4813977 | MDR-TB | lineage4.8 | br | ERR7911684 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4827827 | HR-TB | lineage4 | None | ERR751558 | MDR-TB | lineage4.1.2.1 | pe | ERR7911704 | MDR-TB | lineage4.1.1.3 | za | ERR4822581 | MDR-TB | lineage4.2.1 | tm | SRR30673599 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340054 | MDR-TB | lineage4.2.1 | None | SRR23340094 | MDR-TB | lineage4.2.1 | None | SRR1013562 | Pre-XDR-TB | lineage2.2.2 | None | SRR13449606 | MDR-TB | lineage4.3.3 | None | ERR11775350 | HR-TB | lineage2.2.1 | None | SRR25515377 | MDR-TB | lineage2.2.1 | None | ERR11488879 | Pre-XDR-TB | lineage4.3.4.1 | None | SAMN03246286 | MDR-TB | lineage2.2.1 | cn | ERR10680082 | MDR-TB | lineage6.2.2 | None | ERR10680147 | MDR-TB | lineage6.2.2 | None | SRR21728716 | HR-TB | lineage4.4.2 | None | ERR11798650 | MDR-TB | lineage4.2.1 | None | ERR11043661 | MDR-TB | lineage4.3.3 | None | ERR11043581 | MDR-TB | lineage4.1.2.1 | None | ERR4011976 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1003104 | Pre-XDR-TB | lineage2.2.2 | None | SRR29093106 | MDR-TB | lineage2.2.2 | None | SRR29093345 | MDR-TB | lineage4.1.1.3 | None | ERR11043721 | MDR-TB | lineage4.1.2.1 | None | SRR1723510 | MDR-TB | lineage2.2.1 | cn | SRR15014627 | MDR-TB | lineage2.2.1 | None | ERR10748315 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16370448 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28393952 | MDR-TB | lineage4.1.2.1 | None | SRR29017360 | Pre-XDR-TB | lineage4.3.4 | None | ERR2179653 | MDR-TB | lineage4.4.2 | cn | SRR15316258 | MDR-TB | lineage2.2.1 | None | SRR15316264 | MDR-TB | lineage4.5 | None | SRR29772584 | Pre-XDR-TB | lineage4.8 | None | ERR10680044 | MDR-TB | lineage6.2.2 | None | ERR4827473 | HR-TB | lineage4.2.1 | None | SRR29056139 | MDR-TB | lineage4.2.1 | None | ERR1873391 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869227 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR23691416 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866284 | Pre-XDR-TB | lineage4.8 | None | ERR551466 | MDR-TB | lineage2.2.1 | None | SRR29017642 | MDR-TB | lineage1.1.3.1 | None | SRR1723550 | MDR-TB | lineage2.2.1 | None | SRR29053172 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR867534 | Pre-XDR-TB | lineage4.2.1 | None | SRR29096496 | MDR-TB | lineage4.1.1.3 | None | SRR29094029 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096572 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29055839 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR20969848 | HR-TB | lineage2.2.1 | None | ERR553244 | MDR-TB | lineage4.1.2.1 | None | SRR29094023 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR552648 | HR-TB | lineage4.3.3 | None | ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt | SRR29093542 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156239 | MDR-TB | lineage4.1.1.3 | None | ERR13093931 | MDR-TB | lineage4.2.1 | None | ERR5987307 | MDR-TB | lineage4.1.1.3 | None | ERR550873 | MDR-TB | lineage4.1.2.1 | None | SRR16156730 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29231338 | Pre-XDR-TB | lineage4.1.1.3;lineage4.1.2 | None | SRR21576708 | MDR-TB | lineage2.2.1 | None | ERR2497906 | MDR-TB | lineage4.9 | None | SRR26112569 | HR-TB | lineage1.2.1.2.1 | None | ERR9993218 | XDR-TB | lineage4.1.1.3 | None | SRR25207096 | Pre-XDR-TB | lineage4.5 | None | SRR19276626 | HR-TB | lineage4.3.3 | None | SRR10851704 | Pre-XDR-TB | lineage4.1.1.3;lineage4.1.2 | None | ERR11082809 | MDR-TB | lineage1.1.1.1 | None | SRR13423580 | MDR-TB | lineage2.2.1 | None | SRR25207027 | MDR-TB | lineage4.5 | None | SRR29051264 | HR-TB | lineage4.8 | None | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | ERR13267525 | MDR-TB | lineage4.2.1 | None | ERR13285073 | MDR-TB | lineage4.2.1 | None | ERR7361986 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1013546 | Pre-XDR-TB | lineage2.2.2 | None | ERR8773589 | MDR-TB | lineage2.2.1 | None | ERR10112876 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156241 | MDR-TB | lineage4.1.1.3 | None | SRR29093427 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156243 | MDR-TB | lineage4.1.1.3 | None | SRR8186777 | MDR-TB | lineage2.2.1 | None | ERR4813587 | MDR-TB | lineage4.1.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR4827588 | MDR-TB | lineage2.2.1 | None | ERR11252428 | HR-TB | lineage4.3.4.2 | None | SRR29093974 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9992751 | XDR-TB | lineage4.1.1.3 | None | SRR29093268 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748424 | MDR-TB | lineage4.1.1.3 | None | ERR13258504 | MDR-TB | lineage2.2.1 | None | ERR9993009 | XDR-TB | lineage4.1.1.3 | None | SRR29017420 | Pre-XDR-TB | lineage2.2.1 | None | SRR023475 | MDR-TB | lineage4.2.2.2 | None | SRR29055939 | MDR-TB | lineage4.1.1.3 | None | SRR6896492 | HR-TB | lineage2.2.1 | None | SRR5149238 | HR-TB | lineage2.2.1.1 | None | SRR29093443 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093862 | MDR-TB | lineage4.1.1.3 | None | ERR229974 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR18911986 | HR-TB | lineage4.1.2.1 | None | SRR29093651 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR8758896 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10680018 | MDR-TB | lineage4.1.3 | None | DRR474005 | HR-TB | lineage2.2.1 | None | SRR24256011 | HR-TB | lineage4.8 | None | ERR9119915 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR7069713 | MDR-TB | lineage4.2.1 | None | ERR2653227 | MDR-TB | lineage4.3.4.2 | None | ERR3148185 | MDR-TB | lineage4.1.2.1 | mx | SRR29093458 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29055798 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None | SRR29093760 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4797234 | MDR-TB | lineage2.2.1 | in | ERR4797275 | MDR-TB | lineage1.2.2.2 | in | SRR13232654 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799656 | MDR-TB | lineage4.2.2.2 | in | SRR29093749 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13292397 | HR-TB | lineage4.1.2.1 | None | ERR4799641 | Pre-XDR-TB | lineage4.8 | in | ERR4812160 | MDR-TB | lineage4.1.2.1 | pe | ERR11252552 | HR-TB | lineage4.1.2 | None | DRR130060 | MDR-TB | lineage2.2.1 | None | ERR13284307 | MDR-TB | lineage2.2.1 | None | SRR671780 | MDR-TB | lineage2.2.1 | cn | SRR1166162 | MDR-TB | lineage4.7 | ro | SRR8651578 | Pre-XDR-TB | lineage4.5 | cn | ERR6358839 | MDR-TB | lineage4.6.1.1 | None | ERR4796821 | MDR-TB | lineage4.2.2.2 | None | SRR18593210 | MDR-TB | lineage1.1.2 | None | ERR4811380 | MDR-TB | lineage2.2.1 | None | ERR9992753 | XDR-TB | lineage4.1.1.3 | None | SRR28044988 | MDR-TB | lineage4.2.2.2 | None | ERR11252638 | HR-TB | lineage4.1.2 | None | ERR11774973 | MDR-TB | lineage4.1.1.3 | None | SRR28351277 | MDR-TB | lineage4.8 | None | ERR11775534 | HR-TB | lineage4.3.4.2 | None | ERR2497899 | MDR-TB | lineage4.9 | None | SRR6855776 | HR-TB | lineage4.3.4.2 | None | ERR6362259 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6398049 | HR-TB | lineage4.2.2 | ca | ERR4810471 | Pre-XDR-TB | lineage4.5 | cn | ERR4831847 | MDR-TB | lineage2.2.1 | vn | ERR7911143 | MDR-TB | lineage4.1.2.1 | vn | ERR4831809 | MDR-TB | lineage2.2.1 | vn | ERR4810648 | HR-TB | lineage2.2.1 | cn | ERR4810696 | HR-TB | lineage2.2.1 | None | SRR2024988 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911585 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911590 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911593 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4830394 | HR-TB | lineage2.2.1 | vn | ERR7911596 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911597 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911601 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4812740 | MDR-TB | lineage4.1.4 | pe | ERR7911610 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7737784 | MDR-TB | lineage4.2.2.2 | None | ERR4830602 | Pre-XDR-TB | lineage4.2.1 | tm | ERR11081139 | MDR-TB | lineage4.2.1 | None | ERR7911628 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9807010 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10112861 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025628 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR23340150 | MDR-TB | lineage4.2.1 | None | ERR550874 | MDR-TB | lineage4.1.2.1 | None | ERR552303 | MDR-TB | lineage4.1.2.1 | None | ERR9119259 | HR-TB | lineage2.2.1 | None | ERR9806897 | Pre-XDR-TB | lineage4.1.1.3 | None | SAMEA2533962 | MDR-TB | lineage2.2.1 | uz | SAMEA2533987 | MDR-TB | lineage2.2.1 | uz | SAMEA2534221 | MDR-TB | lineage2.2.1 | uz | ERR553076 | HR-TB | lineage4.3.3 | de | SRR2100869 | MDR-TB | lineage4.1.2.1 | None | ERR1199137 | MDR-TB | lineage4.6.1.2 | ug | ERR1199114 | MDR-TB | lineage4.6.1.2 | ug | ERR216923 | HR-TB | lineage4.8 | mw | ERR2512585 | HR-TB | lineage4.2.2.2 | gb | ERR158589 | HR-TB | lineage2.2.1 | ru | SRR5709992 | MDR-TB | lineage2.2.1 | th | ERR2041708 | MDR-TB | lineage4 | rs | SRR6824447 | MDR-TB | lineage2.2.1 | cn | SRR6824451 | MDR-TB | lineage2.2.1 | cn | SRR6824452 | MDR-TB | lineage2.2.1 | cn | SRR6824337 | Pre-XDR-TB | lineage4.5 | cn | SRR6824521 | MDR-TB | lineage2.2.1 | cn | SRR1049043 | MDR-TB | lineage4.4.2 | None | SRR6824404 | MDR-TB | lineage2.2.1 | cn | SRR15723151 | XDR-TB | lineage2.2.1 | None | SRR6824660 | MDR-TB | lineage2.2.1 | cn | SRR16103889 | HR-TB | lineage2.2.1 | None | SRR21277847 | MDR-TB | lineage2.2.1 | None | ERR1035180 | HR-TB | lineage4.3.4.2 | pt | ERR1035061 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9807014 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096406 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869164 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13292094 | HR-TB | lineage2.2.1 | None | ERR10748237 | MDR-TB | lineage4.3.2.1 | None | ERR9806988 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10112839 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1723573 | MDR-TB | lineage2.2.1 | None | ERR10112843 | XDR-TB | lineage4.1.1.3 | None | SRR29273722 | MDR-TB | lineage4.1.2.1 | None | DRR130133 | MDR-TB | lineage2.2.1 | None | ERR2497900 | MDR-TB | lineage4.9 | None | SRR28868509 | HR-TB | lineage2.2.1 | None | SRR7517806 | MDR-TB | lineage2.2.1 | ch | ERR13260860 | XDR-TB | lineage2.2.1 | None | ERR4195513 | HR-TB | lineage4.8 | None | ERR4827634 | HR-TB | lineage2.2.1 | None | ERR11081374 | MDR-TB | lineage2.2.1 | None | ERR8025443 | Pre-XDR-TB | lineage2.2.2;lineage4.1.1.3 | None | ERR4872127 | MDR-TB | lineage4.1.2.1 | None | ERR10679991 | MDR-TB | lineage1.1.1 | None | ERR10748381 | MDR-TB | lineage3;lineage4.1.1.3 | None | SRR16157097 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR5067498 | HR-TB | lineage1.1.1.1 | vn | SRR22424940 | HR-TB | lineage4.1.1.1 | None | ERR9120109 | MDR-TB | lineage4.1.1.3 | None | ERR9806973 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11662504 | MDR-TB | lineage2.2.1 | None | SRR25534471 | HR-TB | lineage2.2.1 | None | ERR552700 | MDR-TB | lineage4.1.2.1 | None | ERR9993264 | XDR-TB | lineage4.1.1.3 | None | SRR25534200 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806899 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR551467_ERR551466 | MDR-TB | lineage2.2.1 | None | SRR16156755 | MDR-TB | lineage4.1.1.3 | None | ERR9119741 | MDR-TB | lineage4.3.4.2 | None | SRR1013647 | MDR-TB | lineage4.4.2 | None | ERR5987458 | MDR-TB | lineage4.3.4.2 | None | ERR4827675 | HR-TB | lineage2.2.1 | None | ERR552792 | MDR-TB | lineage4.1.2.1 | None | ERR6362771 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4011942 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11662418 | MDR-TB | lineage2.2.1 | None | SRR25207393 | MDR-TB | lineage2.2.1 | None | SRR25827380 | MDR-TB | lineage4.2.2.2 | None | SRR25827500 | MDR-TB | lineage4.2.2.2 | None | ERR4796657 | MDR-TB | lineage4.8 | in | ERR4796858 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4820776 | Pre-XDR-TB | lineage4.8 | gb | ERR9992839 | XDR-TB | lineage4.1.1.3 | None | ERR13286099 | MDR-TB | lineage4.1.1.3 | None | ERR9993105 | XDR-TB | lineage4.1.1.3 | None | ERR9992833 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR21031743 | HR-TB | lineage2.2.1 | None | ERR9993208 | XDR-TB | lineage4.1.1.3 | None | ERR2497881 | MDR-TB | lineage4.9 | None | ERR9992998 | XDR-TB | lineage4.1.1.3 | None | ERR9992974 | XDR-TB | lineage4.1.1.3 | None | ERR9993209 | XDR-TB | lineage4.1.1.3 | None | ERR13288932 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR25207285 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112840 | XDR-TB | lineage4.1.1.3 | None | SRR10869252 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR551828_ERR551829 | MDR-TB | lineage2.2.1 | None | SRR10315638 | MDR-TB | lineage4.1.1.3 | None | SRR16156687 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806985 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6982495 | HR-TB | lineage4.3.4.2 | None | ERR11081761 | MDR-TB | lineage4.2.1 | None | ERR5866331 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748150 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR7070296 | MDR-TB | lineage4.2.1 | None | SRR21277243 | HR-TB | lineage2.2.1 | None | SRR24799226 | MDR-TB | lineage2.2.1 | None | ERR3290821 | MDR-TB | lineage4.5 | None | ERR2497907 | HR-TB | lineage4.9 | None | ERR3132251 | HR-TB | lineage4.3.4.2.1 | None | SRR6930905 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112889 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11488849 | MDR-TB | lineage4.1.2 | None | SRR27450042 | HR-TB | lineage2.2.1 | None | SRR26399314 | HR-TB | lineage2.2.1 | None | ERR8975740 | XDR-TB | lineage4.1.1.3 | None | ERR8975742 | XDR-TB | lineage4.1.1.3 | None | ERR8975781 | XDR-TB | lineage4.1.1.3 | None | ERR8975785 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748144 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2516338 | MDR-TB | lineage6.3.1 | None | ERR8975429 | HR-TB | lineage4.3.4.2.1 | None | ERR8975725 | MDR-TB | lineage4.1.1.3 | None | ERR7162973 | Pre-XDR-TB | lineage2.2.1 | None | ERR7801215 | HR-TB | lineage4.3.4.2.1 | None | SRR3086366 | MDR-TB | lineage2.2.1 | None | ERR11043473 | HR-TB | lineage4.3.3 | None | ERR2516316 | MDR-TB | lineage6.3.1 | be | ERR2516694 | MDR-TB | lineage4.2.1 | nl | ERR2516717 | Pre-XDR-TB | lineage2.2.1 | pe | ERR2516485 | Pre-XDR-TB | lineage4.1.2.1;lineage4.3.4.2 | pe | ERR2516532 | MDR-TB | lineage4.1.1 | pe | ERR4814335 | MDR-TB | lineage4.2.1 | gb | SRR6824581 | MDR-TB | lineage2.2.1;lineage2.2.2 | cn | SRR6824303 | MDR-TB | lineage2.2.1 | cn | SRR6824331 | MDR-TB | lineage4.4.2 | cn | SRR6824329 | MDR-TB | lineage2.2.1 | cn | SRR6824677 | MDR-TB | lineage2.2.1 | cn | SRR6824456 | MDR-TB | lineage2.2.1 | cn | ERR7737724 | MDR-TB | lineage4.2.2.2 | None | ERR2041707 | MDR-TB | lineage4 | None | SRR23339959 | MDR-TB | lineage4.8 | None | SRR29093572 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1048862 | Pre-XDR-TB | lineage2.2.2 | None | ERR4822206 | HR-TB | lineage4.8 | None | ERR11050798 | HR-TB | lineage4.2.2.2 | None | SRR16115868 | HR-TB | lineage4.1.2.1 | None | SRR16156199 | MDR-TB | lineage4.1.1.3 | None | SRR19276624 | MDR-TB | lineage4.7 | None | ERR11050190 | HR-TB | lineage4.1.2.1 | None | SRR28393387 | MDR-TB | lineage2.2.1.1 | None | ERR552195 | MDR-TB | lineage4.1.2.1 | None | ERR9119744 | MDR-TB | lineage4.1.1.3 | None | SRR10305643 | HR-TB | lineage2.2.1 | None | ERR8025698 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806997 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29056326 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1723659 | MDR-TB | lineage2.2.1;lineage4.9 | None | SRR9224996 | MDR-TB | lineage4.1.2.1 | None | SRR1003106 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013545 | Pre-XDR-TB | lineage2.2.2 | None | SRR16370509 | MDR-TB | lineage4.1.2.1 | None | ERR1213896 | MDR-TB | lineage4.1.2.1 | pe | SRR22137417 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423565 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29051225 | HR-TB | lineage4.3.3 | None | ERR11488628 | MDR-TB | lineage2.2.1 | None | SRR29051211 | MDR-TB | lineage4.3.3 | None | ERR9993229 | XDR-TB | lineage4.1.1.3 | None | ERR13289406 | XDR-TB | lineage4.1.1.3 | None | ERR13289299 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11081762 | MDR-TB | lineage4.2.1 | None | SRR25395660 | HR-TB | lineage2.2.1 | None | ERR9806888 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10679999 | MDR-TB | lineage4.1 | None | ERR13289296 | MDR-TB | lineage4.1.1.3 | None | ERR13289331 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13288723 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4872079 | MDR-TB | lineage4.1.2.1 | None | ERR10112887 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13286195 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1723535 | MDR-TB | lineage2.2.1 | None | ERR4799178 | MDR-TB | lineage4.8 | in | ERR13289046 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13286205 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2497897 | MDR-TB | lineage4.9 | None | SRR23340137 | MDR-TB | lineage4.2.1 | None | ERR11488685 | MDR-TB | lineage2.2.1 | None | SRR21887760 | XDR-TB | lineage2.2.1 | None | ERR4830650 | Pre-XDR-TB | lineage4.2.1 | tm | SRR10869161 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4827972 | MDR-TB | lineage2.2.1 | None | SRR10869214 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748485 | XDR-TB | lineage4.1.1.3 | None | SRR28394248 | MDR-TB | lineage4.1.1 | None | ERR5918023 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR5918039 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR5918040 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR6797723 | MDR-TB | lineage2.2.1.2 | None | ERR8975014 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR9613555 | HR-TB | lineage4.8 | None | ERR3132106 | MDR-TB | lineage4.4 | None | ERR2510394 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420743 | Pre-XDR-TB | lineage4.5 | None | ERR552432 | MDR-TB | lineage4.1.3 | cg | ERR552431 | MDR-TB | lineage4.1.3 | cg | ERR1873550 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873546 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873540 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873554 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873448 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873462 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873441 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR108420 | Pre-XDR-TB | lineage2.2.1 | ru | SRR6061380 | HR-TB | lineage4.8 | ca | ERR502506 | MDR-TB | lineage6.2.1 | gh | ERR2512878 | MDR-TB | lineage4.2.1 | gb | ERR4821230 | MDR-TB | lineage4.2.1 | gb | ERR4821668 | HR-TB | lineage4.2.1 | gb | ERR2512440 | MDR-TB | lineage4.2.1 | gb | ERR2513608 | MDR-TB | lineage4.2.1 | gb | ERR2515993 | HR-TB | lineage4.1.2.1 | za | ERR2515801 | MDR-TB | lineage4.3.4.2 | za | ERR2515546 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515475 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515568 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515133 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515337 | XDR-TB | lineage4.1.1.3 | za | ERR133945 | MDR-TB | lineage2.2.1 | ru | SRR5709759 | Pre-XDR-TB | lineage2.2.2 | th | SRR8237332 | HR-TB | lineage2.2.1 | np | SRR1723539 | MDR-TB | lineage2.2.1 | None | ERR9806910 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR25207348 | MDR-TB | lineage2.2.2 | None | SRR29096562 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11081500 | HR-TB | lineage4.3.3 | None | ERR8025541 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025744 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9807000 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR25207170 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680017 | MDR-TB | lineage4.1.2.1 | None | ERR10748491 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2704812 | MDR-TB | lineage5.2 | fr | ERR2497901 | MDR-TB | lineage4.9 | None | ERR2497908 | HR-TB | lineage4.9 | None | ERR234256 | HR-TB | lineage2.2.1.1 | us | SRR28393315 | MDR-TB | lineage4.3.3 | None | SRR29093720 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025592 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR553315 | MDR-TB | lineage4.1.2.1 | None | SRR25827883 | Pre-XDR-TB | lineage3;lineage4.2.2.2 | None | ERR9807002 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR18715352 | HR-TB | lineage4.3.3;lineage4.8 | None | ERR1034641 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR5074135 | HR-TB | lineage1.1.1.1 | vn | ERR8025435 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748522 | MDR-TB | lineage4.1.1.3 | None | ERR867549 | MDR-TB | lineage4.2.1 | None | ERR9907745 | Pre-XDR-TB | lineage4.3.3 | None | ERR4553562 | HR-TB | lineage1.1.3.1 | None | ERR3132140 | MDR-TB | lineage4.1.2.1 | None | ERR4831561 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6930917 | HR-TB | lineage4.3.2 | None | ERR4831557 | Pre-XDR-TB | lineage4.1.1.3;lineage4.3.2.1 | None | ERR553094 | MDR-TB | lineage4.1.2.1 | None | ERR9119485 | MDR-TB | lineage4.1.2.1 | None | ERR3639723 | MDR-TB | lineage4.2.1 | None | ERR11081025 | MDR-TB | lineage6.3.1 | None | ERR8025692 | Pre-XDR-TB | lineage4.1.1.3 | None | SAMN03246321 | MDR-TB | lineage2.2.1 | cn | SRR1013646 | MDR-TB | lineage4.4.2 | None | SRR10869134 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096852 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7821230 | HR-TB | lineage4.1.2 | None | ERR9993088 | MDR-TB | lineage4.1.1.3 | None | ERR9993031 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9992989 | XDR-TB | lineage4.1.1.3 | None | ERR9992746 | XDR-TB | lineage4.1.1.3 | None | ERR13288961 | XDR-TB | lineage4.1.1.3 | None | SRR19320495 | HR-TB | lineage1.2.1.2.1 | None | ERR13289008 | Pre-XDR-TB | lineage2.2.2;lineage4.1.1.3 | None | ERR13288959 | MDR-TB | lineage4.1.1.3 | None | ERR9993219 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2516975 | MDR-TB | lineage4.1.2.1 | gb | SRR19276611 | MDR-TB | lineage4.1.2.1 | None | ERR9993114 | XDR-TB | lineage4.1.1.3 | None | SRR21277277 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653026 | HR-TB | lineage4.8 | None | ERR2515793 | HR-TB | lineage2.2.1 | za | SRR23340019 | MDR-TB | lineage4.2.1 | None | ERR551499 | MDR-TB | lineage2.2.1 | None | SRR8651572 | Pre-XDR-TB | lineage2.2.1 | cn | ERR10112837 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR786503 | MDR-TB | lineage2.2.1 | None | SRR11567801 | Pre-XDR-TB | lineage4.5 | None | ERR8975456 | HR-TB | lineage4.8 | None | SRR16156756 | MDR-TB | lineage4.1.1.3 | None | ERR031481 | HR-TB | lineage2.2.1.1 | None | ERR4830382 | HR-TB | lineage2.2.1 | vn | ERR9125421 | HR-TB | lineage1.2.2.1 | None | ERR270768 | MDR-TB | lineage4.1.2.1 | None | ERR11068021 | MDR-TB | lineage4.2.2.2 | None | SRR3103491 | HR-TB | lineage4.4.1.1 | None |
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