Rv2428 - c.-48G>A
Drug resistance types
0 Sensitive
0 RR-TB
35 HR-TB
111 MDR-TB
72 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 54 |
| lineage4.1.3 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage2.2.2 | 7 |
| lineage6.3.1 | 2 |
| lineage4.1.2.1 | 12 |
| lineage4.2.2.2 | 8 |
| lineage4.1.1.3 | 42 |
| lineage4.4.2 | 5 |
| lineage6.2.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4 | 2 |
| lineage1.1.1.1 | 2 |
| lineage4.5 | 6 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4.2 | 3 |
| lineage4.2.1 | 30 |
| lineage4.8 | 16 |
| lineage4.3.4.2;lineage4.1.2.1 | 1 |
| lineage4.3.4.2;lineage4.3.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9 | 3 |
| lineage4.7 | 1 |
| lineage4.3.3 | 2 |
| 1 | |
| lineage4.4.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3;lineage2.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.2.2 | 1 |
| lineage5.2 | 1 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 219 |
Geographic prevalence
Country level data for this variant is available for 172 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2516717 | Pre-XDR-TB | lineage2.2.1 | pe | ERR552432 | MDR-TB | lineage4.1.3 | cg | SRR6152876 | HR-TB | lineage1.2.1.2.1 | ca | SRR1723510 | MDR-TB | lineage2.2.1 | cn | SRR6824660 | MDR-TB | lineage2.2.1 | cn | ERR751650 | Pre-XDR-TB | lineage2.2.1 | th | ERR4810696 | HR-TB | lineage2.2.1 | None | SAMN02360626 | Pre-XDR-TB | lineage2.2.2 | kr | ERR718507 | HR-TB | lineage2.2.1 | th | ERR2516338 | MDR-TB | lineage6.3.1 | None | SRR6152981 | HR-TB | lineage2.2.1 | ca | ERR7910849 | MDR-TB | lineage4.1.2.1 | pe | ERR4797017 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR6824447 | MDR-TB | lineage2.2.1 | cn | ERR1873554 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515568 | Pre-XDR-TB | lineage4.1.1.3 | za | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | ERR502506 | MDR-TB | lineage6.2.1 | gh | ERR1213896 | MDR-TB | lineage4.1.2.1 | pe | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1199137 | MDR-TB | lineage4.6.1.2 | ug | ERR2515133 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873462 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1034655 | MDR-TB | lineage4 | bg | SRR8651572 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4822365 | MDR-TB | lineage2.2.1 | None | SRR6824456 | MDR-TB | lineage2.2.1 | cn | ERR502937 | MDR-TB | lineage2.2.1 | None | ERR4799656 | MDR-TB | lineage4.2.2.2 | in | SAMEA2534221 | MDR-TB | lineage2.2.1 | uz | SRR5074135 | HR-TB | lineage1.1.1.1 | vn | SRR8651581 | Pre-XDR-TB | lineage4.5 | None | SAMN02360620 | Pre-XDR-TB | lineage2.2.2 | kr | ERR4808876 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873546 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515475 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2099777 | MDR-TB | lineage4.1.2.1 | es | ERR2041708 | MDR-TB | lineage4 | rs | SRR5709759 | Pre-XDR-TB | lineage2.2.2 | th | ERR6358865 | HR-TB | lineage4.6.1.1 | None | ERR8975422 | HR-TB | lineage4.3.4.2 | None | ERR4822581 | MDR-TB | lineage4.2.1 | tm | ERR216923 | HR-TB | lineage4.8 | mw | SRR6824337 | Pre-XDR-TB | lineage4.5 | cn | ERR7911593 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR6824329 | MDR-TB | lineage2.2.1 | cn | ERR4796618 | MDR-TB | lineage4.2.2.2 | in | SAMN02360552 | Pre-XDR-TB | lineage2.2.2 | kr | ERR7911704 | MDR-TB | lineage4.1.1.3 | za | ERR1873550 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2179653 | MDR-TB | lineage4.4.2 | cn | ERR4796657 | MDR-TB | lineage4.8 | in | ERR8975785 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1034990 | MDR-TB | lineage4.1.1.3 | za | ERR7911628 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4820776 | Pre-XDR-TB | lineage4.8 | gb | SRR6824677 | MDR-TB | lineage2.2.1 | cn | ERR8975740 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6152960 | HR-TB | lineage2.2.2 | ca | ERR7911677 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911596 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4813757 | MDR-TB | lineage4.8 | br | SAMEA2533987 | MDR-TB | lineage2.2.1 | uz | ERR8975014 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR671780 | MDR-TB | lineage2.2.1 | cn | SRR8651557 | Pre-XDR-TB | lineage4.5 | cn | ERR4809001 | MDR-TB | lineage2.2.1 | za | ERR4830602 | Pre-XDR-TB | lineage4.2.1 | tm | ERR2516485 | Pre-XDR-TB | lineage4.3.4.2;lineage4.1.2.1 | pe | ERR7911585 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1034911 | MDR-TB | lineage4.3.4.2;lineage4.3.3 | pt | SRR6824404 | MDR-TB | lineage2.2.1 | cn | SRR5067498 | HR-TB | lineage1.1.1.1 | vn | ERR8975725 | MDR-TB | lineage4.1.1.3 | None | ERR3287780 | HR-TB | lineage4.8 | pe | ERR4797028 | Pre-XDR-TB | lineage1.1.2 | in | ERR4813771 | HR-TB | lineage4.8 | None | ERR1035061 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4798329 | MDR-TB | lineage4.2.2.2 | in | ERR552431 | MDR-TB | lineage4.1.3 | cg | ERR4830382 | HR-TB | lineage2.2.1 | vn | ERR2510394 | Pre-XDR-TB | lineage2.2.1 | None | SRR7341680 | HR-TB | lineage4.1.2.1 | ro | ERR4799178 | MDR-TB | lineage4.8 | in | ERR8975456 | HR-TB | lineage4.8 | None | ERR2707086 | MDR-TB | lineage4.9 | cd | ERR1873540 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4797823 | Pre-XDR-TB | lineage4.8 | in | SRR2100869 | MDR-TB | lineage4.1.2.1 | None | ERR2515801 | MDR-TB | lineage4.3.4.2 | za | ERR4799311 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR5709881 | MDR-TB | lineage2.2.1 | th | SRR1723539 | MDR-TB | lineage2.2.1 | None | SAMN03246299 | MDR-TB | lineage2.2.1 | cn | SRR1166162 | MDR-TB | lineage4.7 | ro | SRR1723548 | MDR-TB | lineage2.2.1 | cn | ERR2707058 | MDR-TB | lineage4.9 | cd | SRR7517806 | MDR-TB | lineage2.2.1 | ch | ERR4830650 | Pre-XDR-TB | lineage4.2.1 | tm | ERR553076 | HR-TB | lineage4.3.3 | de | ERR6358839 | MDR-TB | lineage4.6.1.1 | None | SAMN02360560 | Pre-XDR-TB | lineage2.2.2 | kr | SRR23339959 | MDR-TB | lineage4.8 | None | SRR23340019 | MDR-TB | lineage4.2.1 | None | SRR23339985 | MDR-TB | lineage4.2.1 | None | SRR23340007 | MDR-TB | lineage4.2.1 | None | SRR23340058 | MDR-TB | lineage4.2.1 | None | SRR23340041 | MDR-TB | lineage4.2.1 | None | SRR23340054 | MDR-TB | lineage4.2.1 | None | SRR23340034 | MDR-TB | lineage4.2.1 | None | SRR23340062 | MDR-TB | lineage4.2.1 | None | SRR23340143 | Pre-XDR-TB | lineage4.2.1 | None | SRR23340137 | MDR-TB | lineage4.2.1 | None | SRR23340094 | MDR-TB | lineage4.2.1 | None | SRR23340150 | MDR-TB | lineage4.2.1 | None | SRR23340136 | MDR-TB | lineage4.2.1 | None | SRR23340142 | MDR-TB | lineage4.2.1 | None | SRR23340139 | MDR-TB | lineage4.2.1 | None | SRR23340141 | MDR-TB | lineage4.2.1 | None | SRR23691416 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340155 | MDR-TB | lineage4.2.1 | None | SRR23340165 | MDR-TB | lineage4.2.1 | None | SRR23340157 | MDR-TB | lineage4.2.1 | None | SRR23340158 | MDR-TB | lineage4.2.1 | None | SRR671819 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6061380 | HR-TB | lineage4.8 | ca | ERR4797275 | MDR-TB | in | ERR4831847 | MDR-TB | lineage2.2.1 | vn | SAMEA2533962 | MDR-TB | lineage2.2.1 | uz | ERR133945 | MDR-TB | lineage2.2.1 | ru | ERR4812954 | HR-TB | lineage4.4.1 | pe | ERR7911684 | Pre-XDR-TB | lineage4.1.1.3 | za | SAMN02360602 | MDR-TB | lineage4.4.2 | kr | ERR4813749 | HR-TB | lineage4.1.2 | br | ERR7911636 | Pre-XDR-TB | lineage4.1.1.3;lineage2.2.2 | za | ERR2516727 | MDR-TB | lineage2.2.1.1 | None | ERR2512585 | HR-TB | lineage4.2.2.2 | gb | ERR2512440 | MDR-TB | lineage4.2.1 | gb | SRR671737 | MDR-TB | lineage2.2.1 | cn | ERR4830989 | Pre-XDR-TB | lineage4.3.3 | np | SRR8651578 | Pre-XDR-TB | lineage4.5 | cn | SAMN03246286 | MDR-TB | lineage2.2.1 | cn | SAMN03246321 | MDR-TB | lineage2.2.1 | cn | ERR7911597 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4810648 | HR-TB | lineage2.2.1 | cn | ERR7911663 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR2024947 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4800572 | Pre-XDR-TB | lineage4.8 | in | SRR6824581 | MDR-TB | lineage2.2.2;lineage2.2.1 | cn | ERR2515337 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4796595 | Pre-XDR-TB | lineage4.8 | in | ERR2513608 | MDR-TB | lineage4.2.1 | gb | ERR7911675 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR6824521 | MDR-TB | lineage2.2.1 | cn | ERR2515993 | HR-TB | lineage4.1.2.1 | za | ERR7911610 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2516975 | MDR-TB | lineage4.1.2.1 | gb | ERR718297 | HR-TB | lineage2.2.1 | th | ERR2707150 | MDR-TB | lineage4.9 | cd | ERR5918023 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4821230 | MDR-TB | lineage4.2.1 | gb | ERR3148185 | MDR-TB | lineage4.1.2.1 | mx | SRR6824303 | MDR-TB | lineage2.2.1 | cn | ERR8975429 | HR-TB | lineage4.3.4.2.1 | None | ERR1199114 | MDR-TB | lineage4.6.1.2 | ug | ERR4821668 | HR-TB | lineage4.2.1 | gb | SRR2024988 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824331 | MDR-TB | lineage4.4.2 | cn | ERR8975781 | XDR-TB | lineage4.1.1.3 | None | ERR1035180 | HR-TB | lineage4.3.4.2 | pt | SRR1723993 | MDR-TB | lineage4.4.2 | cn | ERR2516316 | MDR-TB | lineage6.3.1 | be | ERR4796649 | MDR-TB | lineage4.1.2.1 | in | ERR4812740 | MDR-TB | lineage4.1.4 | pe | ERR5918039 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2515793 | HR-TB | lineage2.2.1 | za | ERR126642 | HR-TB | lineage4.1.1.3 | mw | ERR2515546 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1035037 | MDR-TB | lineage4.1.1.3 | za | SRR6824452 | MDR-TB | lineage2.2.1 | cn | SRR6398049 | HR-TB | lineage4.2.2 | ca | ERR7911590 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4810471 | Pre-XDR-TB | lineage4.5 | cn | ERR4830394 | HR-TB | lineage2.2.1 | vn | ERR2704812 | MDR-TB | lineage5.2 | fr | ERR234256 | HR-TB | lineage2.2.1.1 | us | ERR5918040 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911143 | MDR-TB | lineage4.1.2.1 | vn | ERR4799641 | Pre-XDR-TB | lineage4.8 | in | ERR4811380 | MDR-TB | lineage2.2.1 | None | ERR3148182 | MDR-TB | lineage2.2.1 | mx | ERR7911637 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873441 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR752233 | HR-TB | lineage4.5 | th | ERR158589 | HR-TB | lineage2.2.1 | ru | ERR4797234 | MDR-TB | lineage2.2.1 | in | SRR6824451 | MDR-TB | lineage2.2.1 | cn | ERR4810954 | MDR-TB | lineage2.2.1 | cn | SRR1723877 | MDR-TB | lineage2.2.1 | cn | ERR4811336 | MDR-TB | lineage2.2.2 | cn | ERR2512878 | MDR-TB | lineage4.2.1 | gb | ERR4796858 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR7911601 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | ERR4831809 | MDR-TB | lineage2.2.1 | vn | ERR4812160 | MDR-TB | lineage4.1.2.1 | pe | ERR4814335 | MDR-TB | lineage4.2.1 | gb | ERR2516532 | MDR-TB | lineage4.1.1 | pe | ERR4808942 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR108420 | Pre-XDR-TB | lineage2.2.1 | ru | SRR8237332 | HR-TB | lineage2.2.1 | np | ERR751558 | MDR-TB | lineage4.1.2.1 | pe | ERR4796985 | MDR-TB | lineage4.2.2.2 | in | ERR4798189 | Pre-XDR-TB | lineage4.8 | in | ERR2516694 | MDR-TB | lineage4.2.1 | nl | ERR8975742 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1873448 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4813977 | MDR-TB | lineage4.8 | br | SRR5709992 | MDR-TB | lineage2.2.1 | th |
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