SRR832996
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR245769
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR1034878
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR245797
|
Sensitive
|
lineage4.3.4.1;lineage4.3.4.2.1
|
mw
|
ERR11243583
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02403621
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR776667
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR1227525
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR16915744
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR553298
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR6397482
|
Sensitive
|
lineage4.3.2
|
ca
|
ERR550623
|
Sensitive
|
lineage4.3.4.2
|
None
|
SAMN01828243
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR28393272
|
Sensitive
|
lineage4.3.3
|
None
|
SRR8698484
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1035051
|
RR-TB
|
lineage4.3.2.1
|
za
|
SAMN02053744
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01925653
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02053793
|
HR-TB
|
lineage4.3.2.1
|
za
|
SAMN02403480
|
MDR-TB
|
lineage4.3.2
|
za
|
ERR3257997
|
Sensitive
|
lineage4.3.1
|
fr
|
SAMN02419572
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
ERR275186
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR037483
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR323113
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR1181083
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR4813874
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6480363
|
Other
|
lineage4.3
|
None
|
ERR6879047
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3257972
|
Sensitive
|
lineage4.3.1
|
fr
|
ERR9119665
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6544660
|
Other
|
lineage4.3.4.1
|
None
|
ERR1063831
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR1034879
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034752
|
HR-TB
|
lineage4.3.4.1
|
pe
|
ERR4812657
|
HR-TB
|
lineage4.3.3
|
None
|
ERR245799
|
Sensitive
|
lineage4.3.4.1
|
mw
|
ERR245724
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN02414892
|
MDR-TB
|
lineage4.3.4.1
|
se
|
SAMN02585890
|
HR-TB
|
lineage4.3.2.1
|
za
|
SAMN02053746
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR10315564
|
Sensitive
|
lineage4.3.2.1
|
None
|
SAMN02414905
|
MDR-TB
|
lineage4.3.3
|
se
|
SRR1011463
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR5865927
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02381052
|
Sensitive
|
lineage4.3.4.2.1
|
ug
|
ERR6544668
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR845937
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SAMEA1317674
|
Sensitive
|
lineage4.3.3
|
za
|
ERR040142
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
SAMN01925614
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13260193
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02350493
|
Sensitive
|
lineage4.3.2.1
|
za
|
SRR833124
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN01925617
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR275185
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR27107299
|
HR-TB
|
lineage4.3
|
None
|
SRR833064
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01925636
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01925657
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1063866
|
Sensitive
|
lineage4.3.3
|
None
|
ERR245708
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1034626
|
Sensitive
|
lineage4.3.4.1
|
br
|
SRR25905991
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3257992
|
Sensitive
|
lineage4.3.1
|
fr
|
SRR1047971
|
Sensitive
|
lineage4.3.3
|
None
|
ERR245673
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR28239472
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1227529
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR16915727
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698503
|
Other
|
lineage4.3.3
|
None
|
ERR6879048
|
Sensitive
|
lineage4.3.3
|
None
|
SRR958224
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR6152781
|
Sensitive
|
lineage4.3.3
|
ca
|
SAMN02053749
|
HR-TB
|
lineage4.3.2.1
|
za
|
ERR776669
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR037516
|
Sensitive
|
lineage4.3.4.1
|
mw
|
SAMN02053781
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR040113
|
Sensitive
|
lineage4.3.4.2.1
|
ug
|
ERR046894
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR047012
|
Sensitive
|
lineage4.3.1.1
|
gb
|
ERR2124105
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR552885
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR23402840
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR275231
|
Sensitive
|
lineage4.3.4.1
|
pt
|
ERR1227523
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR1034863
|
MDR-TB
|
lineage4.3.4.1
|
pt
|
ERR1035049
|
RR-TB
|
lineage4.3.2
|
za
|
SRR20958081
|
Sensitive
|
lineage4.3.3
|
None
|
SRR7276689
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR6879029
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR257914
|
Sensitive
|
lineage4.3.4.2
|
nl
|
ERR1036283
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034718
|
Sensitive
|
lineage4.3.4.2
|
pe
|
ERR037500
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR2027232
|
Other
|
lineage4.3.4.2
|
None
|
SAMN02419647
|
MDR-TB
|
lineage4.3.3
|
by
|
ERR037545
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR8699216
|
Sensitive
|
lineage4.3.3
|
None
|
ERR275202
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SAMN01925640
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR8975923
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR1034883
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR833084
|
Other
|
lineage4.3.2.1
|
None
|
SRR833172
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR28393623
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR2100381
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR037506
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR857300
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2653137
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR16915705
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR4010980
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR245801
|
Other
|
lineage4.3.4.2.1
|
None
|
SAMN01925659
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1034813
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034874
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035237
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034745
|
Sensitive
|
lineage4.3.2
|
pe
|
ERR234251
|
Sensitive
|
lineage4.3.3
|
None
|
SRR1011457
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2513624
|
Sensitive
|
lineage4.3.4.2
|
gb
|
ERR245664
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR025453
|
Sensitive
|
lineage4.3.2
|
nl
|
ERR773791
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR772261
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR6389909
|
Sensitive
|
lineage4.3.2
|
gt
|
SRR1173180
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR8698479
|
HR-TB
|
lineage4.3.3
|
None
|
SRR8698496
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02585957
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02585978
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR1165453
|
MDR-TB
|
lineage4.3
|
None
|
ERR036212
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1036280
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR751609
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR751496
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR1167073
|
MDR-TB
|
lineage4.3
|
None
|
SRR958225
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16915720
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02414868
|
Sensitive
|
lineage4.3.3
|
se
|
SRR20958154
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR20958124
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1023457
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR28393422
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR28393931
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR126637
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR833048
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812655
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28351523
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393796
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR245746
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR833011
|
Other
|
lineage4.3.3
|
None
|
SRR833196
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958123
|
Sensitive
|
lineage4.3.3;lineage4.9
|
None
|
ERR772254
|
MDR-TB
|
lineage4.3.2
|
None
|
SAMN02414852
|
MDR-TB
|
lineage4.3.3
|
se
|
SRR20969774
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02419672
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
SAMN02585923
|
Sensitive
|
lineage4.3.2.1
|
za
|
SRR25827341
|
Pre-XDR-TB
|
lineage3.1.2;lineage4.3.3
|
None
|
SRR026444
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4812245
|
MDR-TB
|
lineage4.3.2
|
pe
|
ERR1034622
|
Other
|
lineage4.3.4.1
|
br
|
ERR036189
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037552
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR038737
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
ERR046732
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
SRR1180254
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR11342640
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02053804
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR28393474
|
HR-TB
|
lineage4.3.3
|
None
|
ERR1034721
|
Sensitive
|
lineage4.3.2
|
pe
|
ERR3257996
|
Sensitive
|
lineage4.3.1
|
fr
|
ERR3340732
|
Sensitive
|
lineage2.2.1.1;lineage4.3.2.1
|
za
|
ERR245788
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN02053751
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR847784
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02053747
|
Sensitive
|
lineage4.3.2.1
|
za
|
SAMN01925651
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR25340891
|
Sensitive
|
lineage4.3.3
|
None
|
SRR13312537
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR245779
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR847791
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR7911443
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR894427
|
Sensitive
|
lineage4.3.2
|
None
|
SRR23902038
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR28393432
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR845941
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1034679
|
MDR-TB
|
lineage4.3.3
|
co
|
ERR1034803
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3257984
|
Sensitive
|
lineage4.3.3
|
fr
|
ERR6879035
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.1
|
None
|
ERR979068
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4827862
|
Sensitive
|
lineage4.3.3
|
None
|
SRR13312535
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1034873
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1036278
|
Sensitive
|
lineage4.3.4.1
|
pt
|
SRR28394006
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR1035232
|
Sensitive
|
lineage4.3.4.2
|
pt
|
SRR28393932
|
HR-TB
|
lineage4.3.2
|
None
|
SAMN01925667
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01828249
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR16915713
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR10854751
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6397978
|
Sensitive
|
lineage4.3.3
|
ca
|
ERR772259
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR1034890
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR037537
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR23339994
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02053770
|
HR-TB
|
lineage4.3.3
|
za
|
SAMN01925618
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02053813
|
Sensitive
|
lineage4.3.2.1
|
None
|
SAMN02053814
|
Sensitive
|
lineage4.3.3
|
None
|
ERR245683
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1034719
|
HR-TB
|
lineage4.3.3
|
pe
|
SRR974839
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR124643
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR20958147
|
Sensitive
|
lineage4.3.3
|
None
|
SRR5338522
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR1063869
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4812251
|
Sensitive
|
lineage4.3.2
|
None
|
SAMN02053796
|
MDR-TB
|
lineage4.3.2.1
|
za
|
ERR553213
|
Sensitive
|
lineage4.3.4.2
|
None
|
SAMN01925619
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR4813485
|
Sensitive
|
lineage4.3.2
|
None
|
SRR6389896
|
Sensitive
|
lineage4.3.2
|
gt
|
ERR1023450
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR046870
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
SAMN02419661
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
ERR037525
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN02053769
|
Other
|
lineage4.3.3
|
za
|
SAMN02053777
|
MDR-TB
|
lineage4.3.2.1
|
za
|
SAMN02053820
|
Sensitive
|
lineage4.3.2.1
|
None
|
SAMN02403504
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR245697
|
Sensitive
|
lineage4.3.4.1
|
mw
|
ERR245752
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245787
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN02403566
|
MDR-TB
|
lineage4.3.4.2
|
za
|
SRR20958138
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR8698502
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698493
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR924231
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393927
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02053821
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02350434
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR28351292
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR23339947
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034885
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR275227
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SAMN02419622
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
ERR1034728
|
MDR-TB
|
lineage4.3.2
|
pe
|
ERR037528
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037487
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR25827730
|
MDR-TB
|
lineage2.2.1.1;lineage4.3.3
|
None
|
ERR047883
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR221649
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR23340074
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698490
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4812611
|
Sensitive
|
lineage4.3.3
|
pe
|
SAMN02584584
|
MDR-TB
|
lineage4.3.3
|
md
|
SAMN01925650
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1023473
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SAMN02585889
|
HR-TB
|
lineage4.3.2.1
|
za
|
SAMN02053811
|
Sensitive
|
lineage4.3.3
|
za
|
SAMN02053819
|
Sensitive
|
lineage4.3.2.1
|
None
|
SAMN02231144
|
Sensitive
|
lineage4.3.1
|
ml
|
SAMN02403589
|
MDR-TB
|
lineage4.3.4.2.1
|
za
|
SAMEA104362063
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR037472
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR275234
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR8976103
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR245770
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN02403549
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02585959
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR1034798
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR037480
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245749
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245765
|
Sensitive
|
lineage4.3.4.1
|
mw
|
SRR25827858
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034812
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR4813510
|
Sensitive
|
lineage4.3.2
|
None
|
ERR245730
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245665
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1035243
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034932
|
Sensitive
|
lineage4.3.4.1
|
za
|
ERR10610154
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR037478
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037501
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR037535
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR1034823
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SAMN02419555
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
ERR6879033
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393727
|
Sensitive
|
lineage4.3.3
|
None
|
ERR133912
|
Sensitive
|
lineage4.3.3
|
ru
|
ERR4812184
|
Sensitive
|
lineage4.3.3
|
pe
|
SRR833074
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR245808
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1227528
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR833015
|
Sensitive
|
lineage4.3.3
|
None
|
ERR245795
|
Sensitive
|
lineage3.1.1;lineage4.3.2.1
|
None
|
SRR20958098
|
Sensitive
|
lineage4.3.3
|
None
|
SRR833130
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR20958103
|
Sensitive
|
lineage4.3.3
|
None
|
SRR23340035
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR245762
|
Sensitive
|
lineage4.3.2.1
|
mw
|
SRR20958126
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR4813053
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR26800491
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR037529
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR2653081
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR28394052
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02053760
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02414983
|
MDR-TB
|
lineage4.3
|
se
|
SRR958221
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR974838
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR046887
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR047014
|
Sensitive
|
lineage4.3.3
|
gb
|
SAMN02403467
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR4813488
|
Other
|
lineage4.3.2
|
None
|
ERR037485
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037522
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
ERR037497
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037532
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR039337
|
Sensitive
|
lineage4.3.1.1
|
gb
|
SRR1159308
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1035017
|
MDR-TB
|
lineage4.3.4.2.1
|
za
|
SRR28394036
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR12416821
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1144795
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR1063868
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4812127
|
Sensitive
|
lineage4.3.4.1
|
pe
|
SRR14802283
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR2653221
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR11465959
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02350486
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR4037825
|
Sensitive
|
lineage4.3.2.1
|
za
|
SAMN02419589
|
Sensitive
|
lineage4.3.3
|
by
|
ERR037494
|
Sensitive
|
lineage4.3.4.1
|
mw
|
DRR184666
|
Sensitive
|
lineage4.3.3
|
vn
|
SRR833091
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR847788
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR847796
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR036226
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
SRR20958153
|
Sensitive
|
lineage4.3.4.1
|
None
|
SAMN02350488
|
MDR-TB
|
lineage4.3.2.1
|
za
|
SAMN01925686
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR833037
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR037539
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1035230
|
Sensitive
|
lineage4.3.4.1
|
pt
|
ERR1227526
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR894430
|
Sensitive
|
lineage4.3.2
|
None
|
SRR23340000
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR553382
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR833023
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR9806844
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR13312539
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR8698488
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR847793
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR11466177
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR6879039
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR958195
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR037518
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
ERR1034759
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1034855
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR245826
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR833097
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN01925663
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR9806843
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR10610188
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR23340134
|
HR-TB
|
lineage4.3.3
|
None
|
SRR23402848
|
Sensitive
|
lineage4.3.4.2
|
None
|
SAMN02350481
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR28045444
|
Other
|
lineage4.3.4.2
|
None
|
SRR28393489
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR19241771
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR4812761
|
Other
|
lineage4.3.2
|
pe
|
ERR245798
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1034837
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR13312533
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2653087
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR776659
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR245666
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR28393849
|
Sensitive
|
lineage4.3.2
|
None
|
SRR833163
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02586080
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR19241777
|
Sensitive
|
lineage4.3.3
|
None
|
ERR038293
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR1034989
|
HR-TB
|
lineage4.3.2.1
|
za
|
ERR6879030
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813329
|
Sensitive
|
lineage4.3.2
|
None
|
ERR2653232
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698487
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034758
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR1034846
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SAMN02414904
|
MDR-TB
|
lineage4.3.3
|
se
|
SAMN02414981
|
MDR-TB
|
lineage4.3.3
|
se
|
SRR1019167
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR847781
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR1036281
|
MDR-TB
|
lineage4.3.4.1
|
pt
|
ERR1036284
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034934
|
Sensitive
|
lineage4.3.4.1
|
za
|
ERR553383
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1035009
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR2653078
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR847787
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR144627
|
HR-TB
|
lineage4.3.3
|
ru
|
ERR1034822
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR6544669
|
HR-TB
|
lineage4.3.4.1
|
None
|
SAMN02419624
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
SAMN02403634
|
MDR-TB
|
lineage4.3.2.1
|
za
|
ERR552250
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR036190
|
Other
|
lineage4.3.2.1
|
mw
|
ERR037548
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1034851
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR2513747
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR245733
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
SRR23310821
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1035034
|
Pre-XDR-TB
|
lineage4.3.4.2.1
|
za
|
ERR1034739
|
HR-TB
|
lineage4.3.3
|
pe
|
SRR833111
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR245780
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR16915740
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR1193765
|
Sensitive
|
lineage4.3.4.2
|
np
|
ERR1036294
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR772263
|
MDR-TB
|
lineage4.3.2
|
None
|
SAMN02053785
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02350422
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR1019161
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR031491
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR126625
|
Sensitive
|
lineage4.3.4.1
|
mw
|
ERR6879042
|
Pre-XDR-TB
|
lineage4.3.2
|
None
|
ERR2510202
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR847789
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR552782
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR8699223
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR1036285
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
SRR4034716
|
Sensitive
|
lineage4.3.2.1
|
za
|
ERR133887
|
Pre-XDR-TB
|
lineage4.3.3
|
ru
|
SRR20958122
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02403537
|
MDR-TB
|
lineage4.3.4.2
|
za
|
ERR9806841
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01925641
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02350485
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR6152983
|
Sensitive
|
lineage4.3.4.1
|
ca
|
ERR13267448
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16915724
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02414951
|
MDR-TB
|
lineage4.3.4.2
|
se
|
ERR036234
|
HR-TB
|
lineage4.3.3
|
mw
|
ERR2653239
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR234265
|
Sensitive
|
lineage4.3.3
|
us
|
ERR11775731
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813515
|
Sensitive
|
lineage4.3.3
|
pe
|
SAMN02053808
|
Other
|
lineage4.3.2.1
|
za
|
ERR11243584
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR181699
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1034736
|
Sensitive
|
lineage4.3.2
|
pe
|
SAMN02350415
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR8698481
|
Other
|
lineage4.3.3
|
None
|
SRR1162471
|
Sensitive
|
lineage4.3.1
|
None
|
ERR772262
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR036245
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR8975968
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR6397797
|
Sensitive
|
lineage4.3.2
|
ca
|
SRR6398065
|
Sensitive
|
lineage4.3.4.2
|
ca
|
ERR275213
|
Sensitive
|
lineage4.3.4.1
|
pt
|
ERR4812859
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SAMN01925689
|
Pre-XDR-TB
|
lineage4.3.4.2.1
|
None
|
SAMN02381010
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR245729
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1034800
|
Sensitive
|
lineage4.3.3
|
pe
|
ERR9806612
|
Sensitive
|
lineage4.3.3
|
None
|
ERR10796639
|
Other
|
lineage4.3.4.2
|
None
|
SRR26387476
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR20958136
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958139
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR2653227
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR037505
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR23402845
|
Sensitive
|
lineage4.3.3
|
None
|
SRR8698494
|
Other
|
lineage4.3.3
|
None
|
ERR4812125
|
Sensitive
|
lineage4.3.3
|
pe
|
ERR551880
|
Sensitive
|
lineage4.3.4.2
|
None
|
SAMEA5569971
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR19241779
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02419654
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
ERR2653206
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR833053
|
HR-TB
|
lineage4.3.3
|
None
|
SRR833060
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034673
|
MDR-TB
|
lineage4.3.3
|
co
|
ERR1034757
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.1
|
pe
|
ERR1034903
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034967
|
Sensitive
|
lineage4.3.2.1
|
za
|
SRR6397340
|
HR-TB
|
lineage4.3.3
|
ca
|
ERR1034891
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR037490
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR894428
|
Sensitive
|
lineage4.3.2
|
None
|
ERR245778
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR2510197
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813484
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1034636
|
HR-TB
|
lineage4.3.4.1
|
br
|
ERR2653240
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393525
|
MDR-TB
|
lineage4.1.2.1;lineage4.3.3
|
None
|
SAMN01925639
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01925668
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02350440
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR7764323
|
Sensitive
|
lineage4.3.4.1
|
None
|
SAMN02419600
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
ERR1034799
|
HR-TB
|
lineage4.3.3
|
pe
|
ERR1034817
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034900
|
MDR-TB
|
lineage4.3.3
|
pt
|
ERR4010974
|
Sensitive
|
lineage4.3.3
|
None
|
ERR6879034
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034850
|
XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034840
|
HR-TB
|
lineage4.3.4.1
|
pt
|
SRR28393972
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393536
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393933
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR037553
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN02403512
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR28394265
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR6389908
|
Sensitive
|
lineage4.3.3
|
gt
|
SRR1162704
|
Sensitive
|
lineage4.3.1
|
None
|
SRR28393894
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393969
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1034680
|
Pre-XDR-TB
|
lineage4.1.2.1;lineage4.3.4.1
|
co
|
SRR28393452
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6480437
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28393550
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393716
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02419644
|
Sensitive
|
lineage4.3.3
|
by
|
SAMN02585973
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR245690
|
Sensitive
|
lineage4.3.4.1
|
mw
|
SAMN02586085
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR026441
|
RR-TB
|
lineage4.3.4.1
|
None
|
ERR1034794
|
HR-TB
|
lineage4.3.4
|
pe
|
ERR037471
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037498
|
Sensitive
|
lineage4.3.4.1
|
mw
|
ERR037538
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1034892
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035251
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR245706
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245709
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245745
|
Sensitive
|
lineage4.3.4.1
|
mw
|
SAMN02381050
|
HR-TB
|
lineage4.3.4.2
|
ug
|
SAMN02586018
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02419635
|
Sensitive
|
lineage4.3.3
|
by
|
SRR28393417
|
MDR-TB
|
lineage4.3.3
|
None
|
DRR184603
|
HR-TB
|
lineage4.3.3
|
vn
|
ERR245661
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245812
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR323049
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR776457
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR2100067
|
Other
|
lineage4.3.3
|
None
|
SRR13312534
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR20958121
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28394218
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393892
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR894429
|
Sensitive
|
lineage4.3.2
|
None
|
ERR11730271
|
RR-TB
|
lineage4.3.2.1
|
None
|
ERR1035214
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR2653201
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4195819
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR046836
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
ERR245667
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR776464
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR5758406
|
Pre-XDR-TB
|
lineage4.3.4.2.1
|
None
|
SAMN02380992
|
Sensitive
|
lineage4.3.4.2.1
|
ug
|
SRR28393435
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR833149
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6389907
|
Sensitive
|
lineage4.3.2
|
gt
|
ERR037493
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN02053806
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02381044
|
MDR-TB
|
lineage4.1.2.1;lineage4.3.3
|
ug
|
ERR037547
|
Sensitive
|
lineage1.1.3.2;lineage4.3.4.1
|
mw
|
SRR25534573
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02053773
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02350467
|
RR-TB
|
lineage4.3.2.1
|
za
|
SAMN02403481
|
MDR-TB
|
lineage4.3.2
|
za
|
ERR4813512
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR833125
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR037479
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR040117
|
Sensitive
|
lineage4.3.4.2.1
|
ug
|
ERR117450
|
Sensitive
|
lineage4.3.4.1
|
ru
|
SAMN02053807
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR245725
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR2514560
|
Sensitive
|
lineage4.3.2.1
|
gb
|
ERR1035252
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR775388
|
MDR-TB
|
lineage4.3.3
|
pe
|
SAMN02053768
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR1173391
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1227532
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR176627
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR10610190
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR833177
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR245718
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
ERR245773
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR28393936
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1034827
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034894
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1227522
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SAMN02350416
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02350427
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN01925660
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR037549
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR4813526
|
Sensitive
|
lineage4.3.3
|
None
|
ERR245809
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR20958160
|
HR-TB
|
lineage4.3.3
|
None
|
SRR6398035
|
Other
|
lineage4.3.3
|
ca
|
ERR1036274
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR847780
|
Pre-XDR-TB
|
lineage4.3.4.2.1
|
za
|
SAMEA104362398
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SAMN02585892
|
Sensitive
|
lineage4.3.2.1
|
za
|
ERR4812151
|
Sensitive
|
lineage4.3.2
|
pe
|
SAMN02381015
|
Sensitive
|
lineage4.3.3
|
ug
|
SAMN02585965
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR8698499
|
HR-TB
|
lineage4.3.3
|
None
|
SRR28393563
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1035253
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR833013
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR833058
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02586032
|
RR-TB
|
lineage4.3.2.1
|
za
|
SAMN02585981
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02419617
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
SRR833137
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034828
|
HR-TB
|
lineage4.3.4.2
|
pt
|
ERR1023432
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4812105
|
HR-TB
|
lineage2.2.1.1;lineage4.3.4.1
|
None
|
ERR037474
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN01925669
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR3257994
|
Sensitive
|
lineage4.3.1
|
fr
|
ERR11775796
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR275187
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287777
|
MDR-TB
|
lineage4.3.4.1;lineage4.9
|
None
|
ERR6879051
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20969622
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR13290373
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SAMN02403513
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02403573
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR245686
|
Sensitive
|
lineage4.3.4.2
|
mw
|
ERR036202
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1036296
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SAMN02403448
|
MDR-TB
|
lineage4.3.2.1
|
za
|
SRR28393756
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR28046021
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393350
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SAMEA2535287
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28393261
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR038744
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
SRR28393505
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR28393456
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393359
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393890
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8698500
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393935
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR28393943
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394198
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393358
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393905
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28351416
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1035026
|
RR-TB
|
lineage4.3.2
|
za
|
ERR245755
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR6397945
|
Sensitive
|
lineage4.3.4.2
|
ca
|
ERR4812637
|
HR-TB
|
lineage4.3.2
|
pe
|
ERR2514970
|
Sensitive
|
lineage4.3.1.1
|
gb
|
ERR13290372
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR9807006
|
Pre-XDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR3257990
|
Sensitive
|
lineage4.3.1
|
fr
|
ERR772260
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR1183967
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR20958093
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16915737
|
RR-TB
|
lineage4.3.4.2
|
None
|
ERR031488
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1034671
|
MDR-TB
|
lineage4.3.3
|
co
|
ERR1034836
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034866
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR6879024
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SAMN01925638
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01925654
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01925675
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02350477
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02403600
|
MDR-TB
|
lineage4.3.4.2.1
|
za
|
SRR833086
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR8698483
|
Other
|
lineage4.3.3
|
None
|
SRR28394273
|
Sensitive
|
lineage4.3.2
|
None
|
SRR23340108
|
Sensitive
|
lineage4.3.3
|
None
|
ERR234267
|
Sensitive
|
lineage4.3.4.2
|
us
|
ERR776462
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR18213924
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR11080908
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR1163337
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02350475
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02403505
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02403604
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR26800454
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR6389906
|
Sensitive
|
lineage4.3.2
|
gt
|
ERR037530
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR040134
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
ERR040120
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
ERR1034786
|
Pre-XDR-TB
|
lineage4.3.2
|
pe
|
ERR1034862
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034882
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035250
|
Sensitive
|
lineage4.3.4.1
|
pt
|
ERR245744
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245741
|
MDR-TB
|
lineage4.3.4.2.1
|
mw
|
SAMN01925661
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02053741
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN01925634
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02053782
|
HR-TB
|
lineage4.3.2.1
|
za
|
ERR037469
|
Sensitive
|
lineage1.2.2.1;lineage4.3.4.2.1
|
mw
|
ERR037514
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037515
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037542
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR039335
|
Sensitive
|
lineage4.3.1.1
|
gb
|
SRR23402842
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4812730
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13261619
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260135
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR847782
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR031489
|
Sensitive
|
lineage4.3.4.2;lineage4.8
|
None
|
ERR13261946
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR8699019
|
RR-TB
|
lineage4.3.4.1
|
None
|
ERR718468
|
Sensitive
|
lineage4.3.4.2
|
th
|
ERR9806848
|
RR-TB
|
lineage4.3.3
|
None
|
ERR037486
|
MDR-TB
|
lineage4.3.4.2.1
|
mw
|
ERR245681
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR8975901
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR245848
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037527
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR4813536
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1036276
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1750879
|
Sensitive
|
lineage4.3.4.2.1
|
zw
|
ERR1815554
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR1034748
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR6879031
|
Sensitive
|
lineage4.3.2
|
None
|
ERR4812008
|
Sensitive
|
lineage4.3.3
|
pe
|
SAMN02053757
|
MDR-TB
|
lineage4.3.2.1
|
za
|
SRR20958140
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1063853
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR16915747
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR037513
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SAMN02403571
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR894431
|
Sensitive
|
lineage4.3.2
|
None
|
ERR245693
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN02419660
|
MDR-TB
|
lineage4.3.3
|
by
|
ERR2510177
|
HR-TB
|
lineage4.3.3
|
pe
|
ERR117730
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1034831
|
MDR-TB
|
lineage4.3.4.1
|
pt
|
SRR833184
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR924230
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR6879040
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR6879025
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR845939
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR13312532
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR736806
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR245737
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR040112
|
Sensitive
|
lineage4.3.4.2.1
|
ug
|
ERR038290
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR047007
|
Sensitive
|
lineage4.3.3
|
gb
|
SRR28393726
|
Sensitive
|
lineage2.2.1.1;lineage4.3.3
|
None
|
SRR15508557
|
Other
|
lineage4.3.3
|
None
|
ERR036244
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR20958089
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3340728
|
Sensitive
|
lineage4.3.2.1
|
za
|
ERR751384
|
HR-TB
|
lineage4.3.3
|
pe
|
SRR958204
|
Sensitive
|
lineage4.3.3
|
None
|
ERR036214
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR8698504
|
Other
|
lineage4.3.3
|
None
|
ERR1034735
|
MDR-TB
|
lineage4.3.3
|
pe
|
SAMN02403583
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN01925615
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2653204
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SAMN02381003
|
MDR-TB
|
lineage4.3.4.2
|
ug
|
ERR1034672
|
MDR-TB
|
lineage4.3
|
co
|
ERR245738
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR833179
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR164017
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR257917
|
Sensitive
|
lineage4.3.4.2
|
nl
|
SAMN02419678
|
Pre-XDR-TB
|
lineage4.3.3
|
by
|
ERR4809141
|
Sensitive
|
lineage4.3.4.2.1
|
za
|
ERR1034906
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR924226
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR9971169
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR221657
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR16915755
|
Sensitive
|
lineage4.3.3
|
None
|
ERR2516955
|
Pre-XDR-TB
|
lineage4.3.3
|
gb
|
SRR28393493
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN01925666
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1227527
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1227531
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR037531
|
Sensitive
|
lineage4.3.2.1
|
mw
|
ERR3094827
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR037554
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1034734
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR037508
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR1227530
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28467040
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034750
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1034860
|
HR-TB
|
lineage4.3.4.2
|
pt
|
SRR833029
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR6389901
|
Sensitive
|
lineage4.3.2
|
gt
|
ERR1036290
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034747
|
HR-TB
|
lineage4.3.3
|
pe
|
SRR22048477
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393889
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR037475
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
SRR28394214
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28351589
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02585921
|
Sensitive
|
lineage4.3.4.2
|
za
|
SRR28393767
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02586084
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR28394128
|
MDR-TB
|
lineage4.1.2.1;lineage4.3.3
|
None
|
SRR1019172
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1019162
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR11252557
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR833078
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR28393428
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393904
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11774848
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR28393923
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR11252555
|
Sensitive
|
lineage4.3.2
|
None
|
SRR23340125
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1034905
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR257891
|
Sensitive
|
lineage4.3.1
|
nl
|
ERR3257971
|
Sensitive
|
lineage4.3.1
|
fr
|
SRR833033
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR833106
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13290370
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR776671
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR29772620
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN01925670
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02350431
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR19241781
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR28393878
|
HR-TB
|
lineage4.3.2
|
None
|
ERR037467
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR038289
|
Other
|
lineage4.3.3
|
None
|
ERR1034784
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR1034889
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1035301
|
MDR-TB
|
lineage4.3.2
|
br
|
ERR6879020
|
Sensitive
|
lineage4.3.4.2
|
None
|
SAMN02585934
|
Sensitive
|
lineage4.3.2.1
|
za
|
SRR1019166
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR833164
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR958201
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR124648
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR126623
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMEA2534980
|
Sensitive
|
lineage4.3.4.2
|
None
|
SAMN02053803
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR2653077
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11050210
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR9971374
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR6879021
|
Sensitive
|
lineage4.3.2
|
None
|
ERR031466
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR776470
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR11465190
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR6389904
|
HR-TB
|
lineage4.3.2
|
gt
|
ERR117466
|
MDR-TB
|
lineage4.3.3
|
ru
|
SRR17657940
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR26387486
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034725
|
MDR-TB
|
lineage4.3.4.1
|
pe
|
ERR1034845
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1034854
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR275235
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR245756
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR8698492
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11775057
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR28393413
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR144621
|
Sensitive
|
lineage4.3.3
|
ru
|
ERR4813347
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02381048
|
MDR-TB
|
lineage4.3.3
|
ug
|
SAMN02414906
|
MDR-TB
|
lineage4.3.3
|
se
|
SRR1173795
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR16915704
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958150
|
Sensitive
|
lineage4.3.3
|
None
|
ERR776474
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR036242
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR245707
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245767
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SAMN02053766
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02053801
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02414856
|
MDR-TB
|
lineage4.3.4.2.1
|
se
|
SRR20958109
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN01925658
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1750877
|
Sensitive
|
lineage4.3.4.2.1
|
zw
|
ERR036192
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
SRR25460166
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN01925633
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02585976
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR20958080
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR1035257
|
RR-TB
|
lineage4.3.4.1
|
pt
|
ERR1036282
|
MDR-TB
|
lineage4.3.4.2
|
pt
|
ERR1063863
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR28393870
|
Sensitive
|
lineage4.3.2
|
None
|
SRR023590
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR1034726
|
MDR-TB
|
lineage4.3.4.1
|
pe
|
ERR1035255
|
Sensitive
|
lineage4.3.4.1
|
pt
|
ERR133821
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
SRR924239
|
Pre-XDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR28393257
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR1036289
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
ERR133917
|
HR-TB
|
lineage4.3.3
|
ru
|
SRR23339988
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR23402841
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813544
|
Sensitive
|
lineage4.3.3
|
pe
|
ERR275228
|
RR-TB
|
lineage4.3.4.1
|
None
|
ERR4383970
|
Sensitive
|
lineage4.3.1
|
None
|
SRR20958146
|
Sensitive
|
lineage4.3.3
|
None
|
SRR833120
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SAMN02053805
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR040116
|
Sensitive
|
lineage4.3.4.2.1
|
ug
|
ERR2653237
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR833105
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR8698497
|
HR-TB
|
lineage4.3.3
|
None
|
ERR10112841
|
Pre-XDR-TB
|
lineage4.3.2.1
|
None
|
SRR16915726
|
Sensitive
|
lineage4.3.3
|
None
|
SAMN02403567
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02414992
|
Pre-XDR-TB
|
lineage4.3.3
|
se
|
SRR11342666
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR037512
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037524
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR040132
|
MDR-TB
|
lineage4.3.3
|
ug
|
ERR137209
|
MDR-TB
|
lineage4.3.3
|
ru
|
SRR20958144
|
Sensitive
|
lineage4.3.3
|
None
|
ERR038745
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
SRR28393790
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR257912
|
Sensitive
|
lineage4.3.4.2
|
nl
|
ERR4813900
|
MDR-TB
|
lineage4.3.3
|
br
|
SAMN02585977
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02586101
|
MDR-TB
|
lineage4.3.3
|
za
|
SAMN02585964
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SAMN02586073
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR245776
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR275224
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pt
|
SRR28394216
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR736832
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4812513
|
Sensitive
|
lineage4.3.2
|
pe
|
ERR4812853
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR6389897
|
Sensitive
|
lineage4.3.2
|
gt
|
SRR833114
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR924219
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR11033642
|
Sensitive
|
lineage4.3.3
|
None
|