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SRA data
Rv3262
- c.306T>C
Drug resistance types
49 Sensitive
0 RR-TB
4 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti
65
La3;M.canetti
2
M.canetti;lineage4.9
1
La1.7;M.canetti;lineage4.9
1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
1
La1.6;La3;M.canetti;lineage2.1;lineage4.9
1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
1
La2;M.canetti
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
75
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1336822
Sensitive
M.canetti
None
ERR266106
Sensitive
M.canetti
None
ERR266107
Other
M.canetti
None
ERR266108
Sensitive
M.canetti
None
ERR266109
Sensitive
M.canetti
None
ERR266110
Other
M.canetti
None
ERR266120
Sensitive
M.canetti
None
ERR266121
Sensitive
M.canetti
None
ERR266122
Sensitive
La3;M.canetti
None
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