Rv3696c - c.621T>C
Drug resistance types
0 Sensitive
5 RR-TB
5 HR-TB
58 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 16 |
| lineage2.1;lineage4.9 | 2 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 11 |
| La3;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.9 | 4 |
| lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| lineage4.8 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816551 | MDR-TB | lineage4.1.1.3 | None | SRR1166821 | RR-TB | lineage4.1.2.1 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None |
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