Rv3793 - c.888C>T
Drug resistance types
213 Sensitive
15 RR-TB
26 HR-TB
49 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.1 | 314 |
| 13 | |
| lineage1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.4.2.1;lineage1.2.2.1 | 2 |
| lineage4.8.1;lineage1.2.2.1 | 1 |
| lineage2.2.1.1;lineage1.2.2.1 | 1 |
| lineage4 | 1 |
| lineage4.9 | 1 |
| lineage4.4.2 | 2 |
| lineage4.1.1;lineage1.2.2.1 | 1 |
| lineage4.1.2;lineage1.2.2.1 | 4 |
| lineage4;lineage1.2.2.1 | 4 |
| lineage4.3.4.2;lineage1.2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 347 |
Geographic prevalence
Country level data for this variant is available for 119 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819203 | RR-TB | lineage1.2.2.1 | None | ERR2516896 | MDR-TB | lineage1.2.2.1 | gb | ERR2515314 | Sensitive | lineage1.2.2.1 | za | ERR4820242 | Other | lineage1.2.2.1 | None | ERR4819275 | Other | lineage1.2.2.1 | gb | ERR1633852 | Sensitive | lineage1.2.2.1 | za | ERR2515557 | Sensitive | lineage1.2.2.1 | za | ERR2199946 | Sensitive | lineage1.2.2.1 | sz | ERR552563 | Other | lineage1.2.2.1 | None | ERR2513933 | Sensitive | lineage1.2.2.1 | gb | SAMN02599070 | Other | lineage1.2.2.1 | in | ERR2514175 | Sensitive | lineage1.2.2.1 | gb | ERR2516948 | MDR-TB | lineage1.2.2.1 | gb | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | ERR11049292 | Sensitive | lineage1.2.2.1 | None | ERR2514163 | Sensitive | lineage1.2.2.1 | gb | ERR2515643 | MDR-TB | lineage1.2.2.1 | za | ERR2515878 | Sensitive | lineage1.2.2.1 | za | ERR2514336 | Sensitive | lineage1.2.2.1 | gb | ERR2515975 | Sensitive | lineage1.2.2.1 | None | ERR2514755 | Sensitive | lineage1.2.2.1 | gb | ERR2199956 | Sensitive | sz | ERR2515986 | Sensitive | lineage1.2.2.1 | None | ERR2516751 | MDR-TB | lineage1.2.2.1 | gb | ERR2517086 | MDR-TB | lineage1.2.2.1 | gb | ERR2516077 | MDR-TB | lineage1.2.2.1 | za | ERR2516075 | Sensitive | lineage1.2.2.1 | None | ERR2516802 | MDR-TB | lineage1.2.2.1 | gb | ERR4820672 | Sensitive | lineage1.2.2.1 | gb | ERR4820618 | HR-TB | lineage1.2.2.1 | gb | ERR2515147 | MDR-TB | lineage1.2.2.1 | za | ERR2199945 | Sensitive | lineage1.2.2.1 | sz | ERR2517381 | Sensitive | lineage1.2.2.1 | nl | ERR4820910 | Other | lineage1.2.2.1 | None | ERR2517374 | Sensitive | lineage1.2.2.1 | nl | ERR278584 | Sensitive | lineage1.2.2.1 | None | SRR5535929 | Sensitive | lineage1.2.2.1 | None | ERR2660491 | Sensitive | lineage1.2.2.1 | None | ERR2660489 | Sensitive | lineage1.2.2.1 | None | ERR2660415 | Sensitive | lineage1.2.2.1 | None | ERR2660456 | Sensitive | lineage1.2.2.1 | None | ERR2660470 | Sensitive | lineage1.2.2.1 | None | ERR2660529 | Other | lineage1.2.2.1 | None | ERR2660522 | Sensitive | lineage1.2.2.1 | None | ERR2660488 | Other | lineage1.2.2.1 | None | ERR2660505 | Other | lineage1.2.2.1 | None | ERR2660519 | Sensitive | lineage1.2.2.1 | None | ERR4821449 | Other | lineage1.2.2.1 | gb | ERR2660533 | Sensitive | lineage1.2.2.1 | None | ERR2660548 | Sensitive | lineage1.2.2.1 | None | ERR266567 | Sensitive | lineage1.2.2.1 | None | ERR4821487 | Other | lineage1.2.2.1 | gb | SRR6045206 | HR-TB | lineage1.2.2.1 | None | ERR4821749 | Other | lineage1.2.2.1 | gb | ERR11067252 | Sensitive | lineage1.2.2.1 | None | SRR6044814 | HR-TB | lineage1.2.2.1 | None | ERR4829362 | Sensitive | lineage1.2.2.1 | None | ERR4830550 | RR-TB | lineage1.2.2.1 | None | ERR279546 | Sensitive | lineage1.2.2.1 | None | ERR4830551 | RR-TB | lineage1.2.2.1 | None | SRR6046873 | Sensitive | lineage1.2.2.1 | None | ERR4830479 | RR-TB | lineage1.2.2.1 | None | ERR294204 | Sensitive | lineage1.2.2.1 | None | ERR3077990 | MDR-TB | lineage1.2.2.1 | None | ERR2199969 | Sensitive | lineage1.2.2.1 | sz | ERR4831530 | MDR-TB | lineage1.2.2.1 | None | ERR4831556 | RR-TB | lineage1.2.2.1 | None | ERR4831387 | Sensitive | lineage1.2.2.1 | de | SRR6896380 | Sensitive | lineage1.2.2.1 | None | ERR4831564 | MDR-TB | lineage1.2.2.1 | None | SRR6855850 | Sensitive | lineage1.2.2.1 | None | SRR6982198 | HR-TB | lineage1 | None | ERR11067367 | Other | lineage6.1.3 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982333 | Sensitive | lineage1.2.2.1 | None | SRR6982375 | Other | lineage1.2.2.1 | None | SRR6855862 | Sensitive | lineage1.2.2.1 | None | ERR495077 | Sensitive | lineage1.2.2.1 | None | SRR6855904 | Sensitive | lineage1.2.2.1 | None | SRR6855955 | Sensitive | lineage1.2.2.1 | None | SRR6855971 | Sensitive | lineage1.2.2.1 | None | SRR9971082 | RR-TB | lineage1.2.2.1 | None | SRR7131273 | Sensitive | lineage1.2.2.1 | None | SRR6982530 | Other | lineage1.2.2.1 | None | SRR9971083 | RR-TB | lineage1.2.2.1 | None | ERR2199955 | HR-TB | lineage1.2.2.1 | sz | SRR9971118 | RR-TB | lineage1.2.2.1 | None | ERR037469 | Sensitive | lineage4.3.4.2.1;lineage1.2.2.1 | mw | ERR2199942 | Sensitive | lineage1.2.2.1 | sz | ERR2199949 | Sensitive | lineage1.2.2.1 | sz | ERR2199971 | Sensitive | lineage1.2.2.1 | sz | ERR036223 | Sensitive | lineage1.2.2.1 | mw | ERR11049036 | Sensitive | lineage1.2.2.1 | None | ERR11049054 | MDR-TB | lineage1.2.2.1 | None | ERR037496 | Sensitive | lineage1.2.2.1 | mw | ERR046844 | Other | lineage1.2.2.1 | gb | ERR038258 | Sensitive | lineage1.2.2.1 | gb | ERR038259 | Sensitive | lineage1.2.2.1 | gb | ERR046848 | Sensitive | lineage1.2.2.1 | gb | ERR046886 | Sensitive | lineage1.2.2.1 | None | ERR046898 | Sensitive | lineage1.2.2.1 | gb | ERR046893 | Other | lineage1.2.2.1 | gb | ERR1023345 | Sensitive | lineage1.2.2.1 | None | ERR072103 | Sensitive | lineage1.2.2.1 | None | ERR10748217 | MDR-TB | lineage1.2.2.1 | None | ERR1023381 | Other | lineage1.2.2.1 | None | ERR10748182 | MDR-TB | lineage1.2.2.1 | None | ERR1023379 | MDR-TB | lineage1.2.2.1 | None | ERR10748190 | MDR-TB | lineage1.2.2.1 | None | ERR3283047 | HR-TB | None | ERR10748543 | MDR-TB | lineage4.8.1;lineage1.2.2.1 | None | ERR11044204 | Sensitive | lineage1.2.2.1 | None | ERR11044428 | Sensitive | lineage1.2.2.1 | None | ERR11044903 | Sensitive | lineage1.2.2.1 | None | ERR11049132 | Sensitive | lineage1.2.2.1 | None | ERR126607 | Sensitive | lineage1.2.2.1 | mw | ERR126636 | Sensitive | lineage1.2.2.1 | mw | ERR3283031 | HR-TB | None | ERR10748243 | MDR-TB | lineage2.2.1.1;lineage1.2.2.1 | None | ERR10748357 | MDR-TB | lineage1.2.2.1 | None | ERR117678 | Other | lineage1.2.2.1 | None | ERR3283028 | Other | None | ERR330694 | Sensitive | lineage1.2.2.1 | None | ERR330650 | Sensitive | lineage1.2.2.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3323726 | Other | lineage1.2.2.1 | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR387009 | Sensitive | lineage1.2.2.1 | None | ERR386943 | Sensitive | lineage1.2.2.1 | None | ERR4195239 | Other | lineage1.2.2.1 | None | ERR400411 | Sensitive | lineage1.2.2.1 | gb | ERR403373 | Sensitive | lineage1.2.2.1 | None | ERR4796953 | MDR-TB | lineage1.2.2.1 | in | ERR4423516 | RR-TB | lineage1.2.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4423515 | RR-TB | lineage1.2.2.1 | None | ERR4423736 | RR-TB | lineage1.2.2.1 | None | ERR4596923 | MDR-TB | lineage1.2.2.1 | None | ERR4798859 | HR-TB | lineage1.2.2.1 | in | ERR4797813 | Other | lineage1.2.2.1 | in | ERR4800194 | Other | lineage1.2.2.1 | in | ERR7821104 | Sensitive | lineage1.2.2.1 | None | ERR4809034 | Sensitive | lineage1.2.2.1 | za | ERR4809116 | Sensitive | lineage1.2.2.1 | za | ERR4809143 | Sensitive | lineage1.2.2.1 | za | ERR4809331 | Sensitive | lineage1.2.2.1 | None | ERR11049977 | Sensitive | lineage1.2.2.1 | None | ERR779664 | Sensitive | lineage1.2.2.1 | None | ERR7821086 | Sensitive | lineage1.2.2.1 | None | ERR7821116 | Sensitive | lineage1.2.2.1 | None | ERR7821110 | Sensitive | lineage1.2.2.1 | None | ERR11049563 | Sensitive | lineage1.2.2.1 | None | ERR4808974 | MDR-TB | lineage1.2.2.1 | None | ERR4809175 | Sensitive | lineage1.2.2.1 | za | ERR4809288 | Sensitive | lineage1.2.2.1 | za | ERR4810877 | Sensitive | lineage4.4.2 | cn | ERR4810879 | Sensitive | lineage4.4.2 | cn | ERR11049846 | Other | lineage1.2.2.1 | None | ERR11049930 | HR-TB | lineage1.2.2.1 | None | ERR7361908 | Sensitive | lineage1.2.2.1 | None | ERR7737850 | MDR-TB | lineage1.2.2.1 | None | ERR7821135 | Sensitive | lineage1.2.2.1 | None | ERR7821164 | Other | lineage1.2.2.1 | None | ERR7821200 | Sensitive | lineage1.2.2.1 | None | ERR7821171 | Other | lineage1.2.2.1 | None | ERR7821195 | Sensitive | lineage1.2.2.1 | None | ERR7821198 | Sensitive | lineage1.2.2.1 | None | ERR7821199 | Sensitive | lineage1.2.2.1 | None | ERR7821227 | Sensitive | lineage1.2.2.1 | None | ERR7821207 | Sensitive | lineage1.2.2.1 | None | ERR7821210 | Sensitive | lineage1.2.2.1 | None | ERR7821216 | Sensitive | lineage1.2.2.1 | None | ERR7902620 | Sensitive | lineage1.2.2.1 | None | ERR7902617 | Sensitive | lineage1.2.2.1 | None | ERR7902644 | Sensitive | lineage1.2.2.1 | None | ERR7902766 | Other | lineage1.2.2.1 | None | ERR7902724 | Sensitive | lineage1.2.2.1 | None | ERR7902670 | Sensitive | lineage1.2.2.1 | None | ERR7902687 | Sensitive | lineage1.2.2.1 | None | ERR8479580 | Other | lineage4.1.1;lineage1.2.2.1 | None | ERR8699788 | Sensitive | lineage1.2.2.1 | None | ERR8975476 | Sensitive | lineage1.2.2.1 | None | ERR8975046 | MDR-TB | lineage1.2.2.1 | None | ERR8975359 | Sensitive | lineage1.2.2.1 | None | ERR8975566 | HR-TB | lineage1.2.2.1 | None | ERR8975723 | HR-TB | lineage1.2.2.1 | None | ERR8975602 | HR-TB | lineage1.2.2.1 | None | ERR8975894 | Sensitive | lineage1.2.2.1 | None | ERR9029383 | Sensitive | lineage1.2.2.1 | None | ERR8975947 | RR-TB | lineage1.2.2.1 | None | ERR9125421 | HR-TB | lineage1.2.2.1 | None | ERR9120067 | MDR-TB | lineage1.2.2.1 | None | ERR9120066 | MDR-TB | lineage1.2.2.1 | None | ERR9992891 | Pre-XDR-TB | lineage1.2.2.1 | None | ERR9657186 | Other | lineage1.2.2.1 | None | ERR9992680 | Pre-XDR-TB | lineage1.2.2.1 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | ERR9992921 | Pre-XDR-TB | lineage1.2.2.1 | None | SRR10315571 | Sensitive | lineage1.2.2.1 | None | ERR11050225 | MDR-TB | lineage1.2.2.1 | None | SRR10726051 | HR-TB | lineage1.2.2.1 | None | SRR10315632 | Sensitive | lineage1.2.2.1 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR10869049 | Sensitive | None | SRR1144739 | MDR-TB | None | SRR1163425 | MDR-TB | lineage1.2.2.1 | None | SRR1144770 | MDR-TB | None | SRR1146364 | MDR-TB | None | ERR11050303 | Sensitive | lineage1.2.2.1 | None | SRR1162954 | MDR-TB | lineage1.2.2.1 | None | SRR1146315 | MDR-TB | None | SRR1163024 | MDR-TB | lineage1.2.2.1 | None | SRR1163176 | MDR-TB | lineage1.2.2.1 | None | ERR11050400 | Sensitive | lineage1.2.2.1 | None | SRR1173673 | Other | lineage1.2.2.1 | None | SRR1173129 | Other | lineage1.2.2.1 | None | SRR1181314 | Sensitive | lineage4.1.2;lineage1.2.2.1 | None | SRR1180271 | Sensitive | lineage4.1.2;lineage1.2.2.1 | None | SRR1181127 | Sensitive | lineage4.1.2;lineage1.2.2.1 | None | SRR12882050 | Sensitive | lineage1.2.2.1 | None | SRR1183065 | Sensitive | lineage4.1.2;lineage1.2.2.1 | None | SRR12199478 | Other | None | SRR12882041 | Sensitive | lineage1.2.2.1 | None | SRR12882232 | Sensitive | lineage1.2.2.1 | None | SRR12882245 | Sensitive | lineage1.2.2.1 | None | SRR12882426 | Sensitive | lineage1.2.2.1 | None | SRR12882248 | Sensitive | lineage1.2.2.1 | None | SRR12882286 | Sensitive | lineage1.2.2.1 | None | SRR12882461 | HR-TB | lineage1.2.2.1 | None | SRR12882572 | Sensitive | lineage1.2.2.1 | None | SRR12882490 | Sensitive | lineage1.2.2.1 | None | SRR12882569 | Sensitive | lineage1.2.2.1 | None | SRR16058313 | HR-TB | lineage1.2.2.1 | None | SRR12882576 | Sensitive | lineage1.2.2.1 | None | SRR12882603 | Other | lineage1.2.2.1 | None | ERR11050604 | HR-TB | lineage1.2.2.1 | None | SRR12882571 | Sensitive | lineage1.2.2.1 | None | SRR12882607 | MDR-TB | lineage1.2.2.1 | None | SRR12882668 | Sensitive | lineage1.2.2.1 | None | ERR11050529 | Sensitive | lineage1.2.2.1 | None | SRR16089548 | Other | lineage1.2.2.1 | None | SRR2100779 | Sensitive | lineage1.2.2.1 | None | SRR17856689 | Other | lineage1.2.2.1 | None | SRR18213821 | Sensitive | lineage1.2.2.1 | None | SRR18213963 | Sensitive | lineage1.2.2.1 | None | SRR19415648 | Sensitive | lineage1.2.2.1 | None | SRR2100400 | MDR-TB | lineage1.2.2.1 | None | SRR16089847 | Sensitive | lineage1.2.2.1 | None | SRR16099299 | Other | lineage1.2.2.1 | None | SRR2100241 | Other | lineage1.2.2.1 | None | SRR2100525 | Sensitive | lineage1.2.2.1 | None | SRR2101088 | Sensitive | lineage1.2.2.1 | None | SRR2101006 | Sensitive | lineage1.2.2.1 | None | SRR2101591 | Sensitive | lineage1.2.2.1 | None | SRR2101132 | Sensitive | lineage1.2.2.1 | None | SRR2101506 | Sensitive | lineage1.2.2.1 | None | SRR2101572 | RR-TB | lineage1.2.2.1 | None | ERR11068020 | HR-TB | lineage1.2.2.1 | None | SRR2101735 | Other | lineage1.2.2.1 | None | ERR11068019 | HR-TB | lineage1.2.2.1 | None | ERR11068648 | HR-TB | lineage1.2.2.1 | None | ERR11068108 | Other | lineage1.2.2.1 | None | ERR9806919 | RR-TB | lineage1.2.2.1 | None | ERR9806852 | MDR-TB | lineage1.2.2.1 | None | ERR6929532 | MDR-TB | lineage1.2.2.1 | None | ERR6929521 | Sensitive | lineage1.2.2.1 | None | ERR9806656 | MDR-TB | lineage1.2.2.1 | None | ERR9806837 | MDR-TB | lineage1.2.2.1 | None | ERR9807021 | Sensitive | lineage1.2.2.1 | None | ERR9806855 | MDR-TB | lineage1.2.2.1 | None | ERR9807022 | MDR-TB | lineage1.2.2.1 | None | ERR10610189 | MDR-TB | lineage1.2.2.1 | None | ERR10610111 | MDR-TB | lineage1.2.2.1 | None | ERR4815247 | Sensitive | lineage1.2.2.1 | gb | ERR10610295 | MDR-TB | lineage1.2.2.1 | None | ERR3276086 | Sensitive | lineage1.2.2.1 | nl | ERR10610231 | MDR-TB | lineage1.2.2.1 | None | SRR6650390 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR161122 | Sensitive | lineage4.3.4.2;lineage1.2.2.1 | mw | ERR190337 | Sensitive | lineage1.2.2.1 | mw | ERR190336 | Sensitive | lineage1.2.2.1 | mw | ERR161100 | Sensitive | lineage1.2.2.1 | mw | ERR161123 | Sensitive | lineage4.3.4.2.1;lineage1.2.2.1 | mw | ERR161124 | Sensitive | lineage1.2.2.1 | mw | ERR161121 | Sensitive | lineage1.2.2.1 | mw | ERR2199995 | Sensitive | lineage1.2.2.1 | sz | ERR161138 | HR-TB | lineage1.2.2.1 | mw | ERR2199775 | Sensitive | lineage1.2.2.1 | None | ERR181725 | Sensitive | lineage1.2.2.1 | mw | ERR161144 | HR-TB | lineage1.2.2.1 | mw | SAMN02414921 | MDR-TB | lineage1.2.2.1 | se | ERR163963 | Sensitive | lineage1.2.2.1 | mw | ERR181778 | Sensitive | lineage1.2.2.1 | mw | ERR181794 | Sensitive | lineage1.2.2.1 | mw | ERR182010 | Sensitive | lineage1.2.2.1 | mw | ERR181810 | Sensitive | lineage1.2.2.1 | mw | ERR181807 | Sensitive | lineage1.2.2.1 | mw | ERR176570 | Sensitive | lineage1.2.2.1 | mw | ERR4814837 | Sensitive | lineage1.2.2.1 | gb | ERR2446328 | Sensitive | lineage1.2.2.1 | nl | ERR176453 | Sensitive | lineage1.2.2.1 | mw | ERR176476 | Sensitive | lineage1.2.2.1 | mw | SAMN02414901 | MDR-TB | se | ERR176637 | Sensitive | lineage1.2.2.1 | mw | ERR212084 | Sensitive | lineage1.2.2.1 | None | ERR4817038 | Sensitive | lineage1.2.2.1 | gb | ERR212090 | Sensitive | lineage1.2.2.1 | mw | ERR552562 | Other | lineage1.2.2.1 | None | ERR212096 | Sensitive | lineage1.2.2.1 | mw | ERR212100 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR212097 | Sensitive | lineage1.2.2.1 | mw | ERR212102 | Sensitive | lineage1.2.2.1 | mw | ERR212108 | RR-TB | lineage1.2.2.1 | mw | ERR212107 | Sensitive | lineage4;lineage1.2.2.1 | mw | ERR212180 | Sensitive | lineage1.2.2.1 | mw | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR212110 | Sensitive | lineage1.2.2.1 | mw | ERR212131 | Sensitive | lineage1.2.2.1 | mw | ERR212157 | Sensitive | lineage1.2.2.1 | mw | ERR2199940 | Sensitive | lineage1.2.2.1 | sz | ERR221569 | Sensitive | lineage1.2.2.1 | mw | ERR4817143 | Sensitive | lineage1.2.2.1 | gb | ERR221557 | Sensitive | lineage1.2.2.1 | mw | ERR11049217 | Sensitive | lineage1.2.2.1 | None | ERR221606 | Sensitive | lineage1.2.2.1 | mw | SRR8380925 | HR-TB | lineage1.2.2.1 | in | ERR3275516 | Sensitive | lineage1.2.2.1 | nl | ERR233353 | Sensitive | lineage1.2.2.1 | et | ERR1200629 | Sensitive | lineage1.2.2.1 | et | ERR2513197 | Sensitive | lineage1.2.2.1 | gb | ERR2199923 | Sensitive | lineage1.2.2.1 | sz | ERR2513377 | Sensitive | lineage1.2.2.1 | gb | ERR228168 | Sensitive | lineage1.2.2.1 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR4818833 | Sensitive | lineage1.2.2.1 | None | ERR245727 | Sensitive | lineage1.2.2.1 | mw | ERR245672 | Sensitive | lineage1.2.2.1 | mw | ERR4818231 | Sensitive | lineage1.2.2.1 | gb | ERR2199950 | Sensitive | lineage1.2.2.1 | sz | ERR245751 | Sensitive | lineage1.2.2.1 | mw | ERR245739 | Sensitive | lineage1.2.2.1 | mw | ERR4818886 | Sensitive | lineage1.2.2.1 | gb | SRR8380953 | Other | lineage1.2.2.1 | in | ERR2503431 | Sensitive | lineage1.2.2.1 | fi | ERR245811 | Sensitive | lineage1.2.2.1 | mw | ERR245843 | Sensitive | lineage1.2.2.1 | mw |
|---|
