TB-Profiler
Home
Upload
SRA data
Rv3793
- c.888C>T
Drug resistance types
285 Sensitive
17 RR-TB
27 HR-TB
80 MDR-TB
2 Pre-XDR-TB
3 XDR-TB
59 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage1.2.2.1
446
La3;lineage4.9
4
lineage1.2.2.1;lineage4.1.2
4
lineage1.2.2.1;lineage4
4
lineage1.2.2.1;lineage4.3.4.2.1
2
lineage4.4.2
2
lineage1.2.2.1;lineage4.4.1.1
2
lineage1.2.2.1;lineage4.3.4.2
1
lineage1.2.2.1;lineage4.9
1
lineage1.2.2.1;lineage2.2.1.1
1
Showing 1 to 10 of 16 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
473
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR036223
Sensitive
lineage1.2.2.1
mw
ERR037469
Sensitive
lineage1.2.2.1;lineage4.3.4.2.1
mw
ERR037496
Sensitive
lineage1.2.2.1
mw
ERR038258
Sensitive
lineage1.2.2.1
gb
ERR038259
Sensitive
lineage1.2.2.1
gb
ERR046844
Other
lineage1.2.2.1
gb
ERR046848
Sensitive
lineage1.2.2.1
gb
ERR046886
Sensitive
lineage1.2.2.1
None
ERR046893
Other
lineage1.2.2.1
gb
ERR046898
Sensitive
lineage1.2.2.1
gb
Showing 1 to 10 of 473 entries
Previous
1
2
3
4
5
…
48
Next