Rv3794 - c.2280G>C
Drug resistance types
15 Sensitive
2 RR-TB
9 HR-TB
12 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.1 | 27 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| 1 | |
| lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR4034747 | MDR-TB | lineage4.4.1.1 | za | SAMEA1523389 | Sensitive | lineage4.4.1.1 | za | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2515168 | Sensitive | lineage4.4.1.1 | za | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR4034751 | MDR-TB | lineage4.4.1.1 | za | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2145507 | Sensitive | lineage4.4.1.1 | None | SRR4034753 | MDR-TB | lineage4.4.1.1 | za | SRR6855771 | Sensitive | lineage4.4.1.1 | None | SRR6896269 | Sensitive | lineage4.4.1.1 | None | SRR6896274 | Sensitive | lineage4.4.1.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR171140 | Sensitive | lineage4.4.1.1 | None | SRR6856026 | HR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR4034756 | MDR-TB | lineage4.4.1.1 | za | SRR7645854 | MDR-TB | lineage4.4.1.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR25827682 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR4034755 | MDR-TB | lineage4.4.1.1 | za | SRR4034754 | MDR-TB | lineage4.4.1.1 | za | SRR6896378 | Sensitive | lineage4.4.1.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4809342 | MDR-TB | lineage4.4.1.1 | za | SRR12142341 | HR-TB | lineage2.1 | None | SRR4034752 | MDR-TB | lineage4.4.1.1 | za | SRR4034749 | MDR-TB | lineage4.4.1.1 | za | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR4034750 | MDR-TB | lineage4.4.1.1 | za | SRR6982172 | Sensitive | lineage4.4.1.1 | None | ERR2515461 | Sensitive | lineage4.4.1.1 | None | ERR966619 | Sensitive | lineage4.4.1.1 | None | SRR9971382 | Sensitive | lineage4.4.1.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR2101479 | Sensitive | lineage4.4.1.1 | None | ERR2515516 | Sensitive | lineage4.4.1.1 | za | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR7821168 | Sensitive | lineage4.4.1.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR2515952 | MDR-TB | lineage4.4.1.1 | za | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
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