Rv3862c - p.Tyr27*
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
171 Sensitive
9 RR-TB
23 HR-TB
42 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 256 |
| lineage4.3.2 | 3 |
| lineage4.3.3;lineage4.4.1.2 | 2 |
| lineage3 | 5 |
| lineage2.2.1 | 12 |
| lineage4.5 | 1 |
| lineage4.8 | 4 |
| lineage1.1.2;lineage4 | 3 |
| lineage1.1.2;lineage4.1.3 | 1 |
| lineage1.1;lineage4.1.3 | 2 |
| lineage1.1.2;lineage1.2.2.2 | 2 |
| lineage1.1.2;lineage4.3.3 | 1 |
| lineage1.1;lineage4 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1;lineage4.1.2.1 | 1 |
| lineage1.1.2;lineage4.1 | 2 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 301 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28045662 | Sensitive | lineage1.1.2 | None | ERR11044525 | Sensitive | lineage1.1.2 | None | ERR11049498 | Sensitive | lineage1.1.2 | None | ERR11050993 | Other | lineage1.1.2 | None | ERR046856 | MDR-TB | lineage1.1.2 | gb | SRR22137373 | Sensitive | lineage1.1.2 | None | SRR29231262 | Other | lineage1.1.2 | None | SRR11348211 | Other | lineage1.1.2 | None | SRR19325576 | Sensitive | lineage1.1.2 | None | SRR28045265 | Sensitive | lineage1.1.2 | None | SRR8380907 | Sensitive | lineage1.1.2 | in | SRR28868357 | Sensitive | lineage1.1.2 | None | ERR6865393 | Sensitive | lineage4.3.2 | None | SRR8380947 | MDR-TB | lineage1.1.2 | in | ERR028355 | Other | lineage1.1.2 | None | ERR4797552 | Other | lineage1.1.2 | in | SRR15014704 | MDR-TB | lineage1.1.2 | None | SRR14164427 | Other | lineage1.1.2 | None | SRR22536484 | MDR-TB | lineage4.3.2 | None | SRR22424791 | Pre-XDR-TB | lineage1.1.2 | None | SRR1173566 | Other | lineage1.1.2 | None | ERR13291320 | HR-TB | lineage1.1.2 | None | ERR13292121 | Sensitive | lineage1.1.2 | None | SRR8380883 | Other | lineage1.1.2 | in | SRR11348203 | Sensitive | lineage1.1.2 | None | SRR21736953 | Sensitive | lineage1.1.2 | None | SRR16103910 | Sensitive | lineage1.1.2 | None | SRR16370395 | HR-TB | lineage1.1.2 | None | ERR400410 | Sensitive | lineage1.1.2 | None | SRR21657209 | HR-TB | lineage1.1.2 | None | SRR29051197 | Other | lineage1.1.2 | None | SRR28858595 | Sensitive | lineage1.1.2 | None | SRR29772765 | HR-TB | lineage1.1.2 | None | ERR2514964 | Sensitive | lineage1.1.2 | gb | SRR18213770 | Sensitive | lineage1.1.2 | None | SRR29230656 | Other | lineage1.1.2 | None | SRR29772749 | MDR-TB | lineage1.1.2 | None | SRR1172779 | Other | lineage1.1.2 | None | SRR29342486 | Sensitive | lineage1.1.2 | None | ERR4010973 | Sensitive | lineage4.3.3;lineage4.4.1.2 | None | ERR13261311 | Sensitive | lineage3 | None | SRR7069539 | Other | lineage1.1.2 | None | ERR3324368 | RR-TB | lineage1.1.2 | None | ERR13266945 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772639 | Pre-XDR-TB | lineage1.1.2 | None | SRR29772504 | MDR-TB | lineage1.1.2 | None | ERR228169 | Sensitive | lineage1.1.2 | None | SRR30182395 | Sensitive | lineage1.1.2 | None | ERR4817548 | Sensitive | lineage1.1.2 | None | SRR1175027 | Sensitive | lineage1.1.2 | None | SRR21732934 | Sensitive | lineage1.1.2 | None | SRR29126249 | Sensitive | lineage1.1.2 | None | ERR13266781 | Sensitive | lineage1.1.2 | None | SRR29772559 | MDR-TB | lineage1.1.2 | None | SRR29772581 | RR-TB | lineage1.1.2 | None | SAMN02598978 | Other | lineage1.1.2 | None | SRR1173084 | Other | lineage1.1.2 | None | ERR11081334 | Other | lineage1.1.2 | None | SRR7069828 | Sensitive | lineage1.1.2 | None | ERR13289773 | HR-TB | lineage1.1.2 | None | SRR29772478 | RR-TB | lineage1.1.2 | None | SRR22250050 | Sensitive | lineage1.1.2 | None | SRR22137378 | Sensitive | lineage1.1.2 | None | SRR6797651 | HR-TB | lineage1.1.2 | None | ERR4817515 | Sensitive | lineage1.1.2 | None | SRR29772506 | MDR-TB | lineage1.1.2 | None | ERR028334 | Other | lineage1.1.2 | None | SRR22250225 | Sensitive | lineage1.1.2 | None | SRR22251343 | Sensitive | lineage1.1.2 | None | SRR1174291 | Other | lineage1.1.2 | None | SRR12882433 | Other | lineage1.1.2 | None | ERR13262174 | Sensitive | lineage1.1.2 | None | SRR3724808 | Sensitive | lineage1.1.2 | None | ERR4798679 | Other | lineage1.1.2 | in | ERR4798684 | Sensitive | lineage1.1.2 | in | ERR4796966 | HR-TB | lineage2.2.1 | in | ERR4797328 | Sensitive | lineage3 | in | ERR10465753 | Sensitive | lineage1.1.2 | None | ERR4798494 | Sensitive | lineage1.1.2 | in | ERR7902599 | Sensitive | lineage1.1.2 | None | ERR4798946 | MDR-TB | lineage1.1.2 | in | SRR15014741 | MDR-TB | lineage1.1.2 | None | SRR11972156 | Sensitive | lineage1.1.2 | None | ERR4819853 | Sensitive | lineage1.1.2 | gb | ERR4830130 | MDR-TB | lineage2.2.1 | None | SRR18149445 | HR-TB | lineage1.1.2 | None | ERR7902642 | Sensitive | lineage1.1.2 | None | SRR22137384 | Sensitive | lineage1.1.2 | None | SRR22137441 | Sensitive | lineage1.1.2 | None | SRR28044486 | Sensitive | lineage1.1.2 | None | ERR9124922 | Sensitive | lineage1.1.2 | None | SAMN02599136 | Sensitive | lineage1.1.2 | in | ERR230023 | Sensitive | lineage1.1.2 | None | SRR18213943 | HR-TB | lineage1.1.2 | None | SRR28044509 | MDR-TB | lineage1.1.2 | None | SRR28044317 | Sensitive | lineage1.1.2 | None | SRR28044774 | Sensitive | lineage1.1.2 | None | SRR28046300 | Sensitive | lineage1.1.2 | None | SRR28045058 | Other | lineage1.1.2 | None | SRR2024939 | MDR-TB | lineage2.2.1 | cn | SRR22251234 | Sensitive | lineage1.1.2 | None | SRR8380900 | Other | lineage1.1.2 | in | SRR8380924 | Other | lineage1.1.2 | in | SRR22249890 | Sensitive | lineage4.5 | None | SRR11348202 | Sensitive | lineage1.1.2 | None | SRR16156826 | MDR-TB | lineage2.2.1 | None | SRR28045968 | Sensitive | lineage1.1.2 | None | SRR28044583 | HR-TB | lineage1.1.2 | None | SRR17658582 | Sensitive | lineage1.1.2 | None | SRR11972251 | Sensitive | lineage1.1.2 | None | SRR1735717 | Sensitive | lineage1.1.2 | gb | SRR1735716 | Sensitive | lineage1.1.2 | gb | ERR2509680 | Sensitive | lineage1.1.2 | gb | ERR4829799 | Sensitive | lineage4.8 | it | ERR4815237 | Sensitive | lineage1.1.2 | gb | ERR4816816 | Other | lineage1.1.2 | gb | ERR4818551 | HR-TB | lineage1.1.2 | gb | ERR4818560 | Sensitive | lineage1.1.2 | gb | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR2512426 | Sensitive | lineage1.1.2 | gb | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR28045430 | Sensitive | lineage1.1.2 | None | ERR234205 | Other | lineage1.1.2 | gh | SRR30182590 | Other | lineage1.1.2 | None | ERR13267752 | Sensitive | lineage1.1.2 | None | ERR4819531 | Sensitive | lineage1.1.2 | None | SRR22137372 | Sensitive | lineage1.1.2 | None | SRR21732850 | Sensitive | lineage1.1.2 | None | SRR22251439 | Sensitive | lineage1.1.2 | None | SRR22137388 | Sensitive | lineage1.1.2 | None | ERR4821320 | Sensitive | lineage1.1.2 | None | ERR330707 | Sensitive | lineage1.1.2;lineage4 | None | ERR13260052 | MDR-TB | lineage1.1.2 | None | ERR3324334 | MDR-TB | lineage1.1.2 | None | SRR8380876 | MDR-TB | lineage1.1.2 | in | ERR3324335 | Other | lineage1.1.2 | None | ERR3324364 | Other | lineage1.1.2 | None | ERR3324342 | Other | lineage1.1.2 | None | ERR3806832 | Other | lineage1.1.2 | None | ERR9786026 | Other | lineage1.1.2 | None | ERR7902606 | HR-TB | lineage1.1.2 | None | SRR15014722 | MDR-TB | lineage1.1.2 | None | SRR15014749 | MDR-TB | lineage1.1.2 | None | SRR22424749 | RR-TB | lineage1.1.2 | None | SRR22424873 | Sensitive | lineage1.1.2 | None | SRR16370344 | Other | lineage1.1.2 | None | SRR25340857 | Sensitive | lineage1.1.2 | None | SRR28044787 | Sensitive | lineage1.1.2 | None | SRR21677622 | HR-TB | lineage1.1.2 | None | SRR28858762 | Sensitive | lineage1.1.2 | None | SRR6797452 | Sensitive | lineage1.1.2 | None | ERR11049701 | Sensitive | lineage1.1.2 | None | ERR2020075 | Pre-XDR-TB | lineage2.2.1 | None | ERR13245759 | Sensitive | lineage2.2.1 | None | ERR4815515 | Sensitive | lineage1.1.2;lineage4.1.3 | None | ERR4816100 | Sensitive | lineage1.1;lineage4.1.3 | None | ERR2446091 | Sensitive | lineage1.1.2 | None | SRR6797708 | Sensitive | lineage1.1.2 | None | SRR28859901 | Sensitive | lineage1.1.2 | None | SRR11348212 | Other | lineage1.1.2 | None | SRR22137396 | Sensitive | lineage1.1.2 | None | SRR11348172 | Other | lineage1.1.2 | None | SRR11348156 | Pre-XDR-TB | lineage1.1.2 | None | SRR29772753 | MDR-TB | lineage1.1.2 | None | ERR2200142 | Sensitive | lineage1.1.2 | None | SRR22249586 | Sensitive | lineage1.1.2 | None | DRR188487 | Sensitive | lineage2.2.1 | None | ERR13266494 | Sensitive | lineage1.1.2 | None | SRR17832807 | Sensitive | lineage3 | None | SRR10726044 | MDR-TB | lineage1.1.2 | None | SRR15014654 | MDR-TB | lineage1.1.2 | None | ERR4820495 | Sensitive | lineage1.1.2 | None | SRR29772780 | MDR-TB | lineage1.1.2 | None | ERR4796643 | Sensitive | lineage1.1.2 | in | ERR4797101 | Sensitive | lineage1.1.2;lineage1.2.2.2 | in | ERR4797791 | HR-TB | lineage1.1.2 | in | ERR4799154 | Sensitive | lineage1.1.2 | in | ERR13284596 | MDR-TB | lineage1.1.2 | None | ERR4799884 | Sensitive | lineage1.1.2;lineage4.3.3 | in | SRR29126709 | Sensitive | lineage4.8 | None | ERR4831150 | Other | lineage1.1.2 | de | ERR4799881 | Sensitive | lineage1.1.2 | in | ERR270666 | HR-TB | lineage1.1.2 | None | SRR28045505 | Sensitive | lineage1.1.2 | None | SAMN02599168 | Other | lineage1.1.2 | in | SRR28045092 | Sensitive | lineage1.1.2 | None | SRR28044670 | RR-TB | lineage1.1.2 | None | SRR28044487 | Sensitive | lineage1.1.2 | None | SRR28045624 | RR-TB | lineage1.1.2 | None | SRR28045267 | Sensitive | lineage1.1.2 | None | SRR28046254 | Sensitive | lineage1.1.2 | None | SRR28045483 | MDR-TB | lineage1.1.2 | None | SRR28044825 | Sensitive | lineage1.1.2 | None | ERR4811452 | Other | lineage1.1.2 | None | SRR10380185 | Sensitive | lineage2.2.1 | None | ERR1555048 | MDR-TB | lineage4.8 | None | SRR22249834 | Sensitive | lineage1.1.2 | None | SRR8380863 | Other | lineage1.1.2 | in | SRR28044511 | MDR-TB | lineage1.1.2 | None | SRR11972459 | Sensitive | lineage1.1.2 | None | SRR2099959 | HR-TB | lineage1.1.2 | None | SRR2100651 | Sensitive | lineage1.1.2 | None | SRR7585405 | Sensitive | lineage1.1.2 | in | ERR2514107 | Other | lineage1.1.2 | gb | ERR2512605 | Sensitive | lineage1.1.2 | gb | ERR2200143 | Sensitive | lineage1.1.2 | de | SRR12882753 | Sensitive | lineage1.1.2 | None | SRR28046155 | Sensitive | lineage1.1.2 | None | ERR234182 | Other | lineage1.1.2 | None | SRR28045277 | Sensitive | lineage1.1.2 | None | ERR13289568 | Sensitive | lineage1.1.2 | None | ERR4820177 | Other | lineage1.1.2 | None | ERR11082614 | MDR-TB | lineage1.1.2 | None | SRR17856684 | Other | lineage1.1.2 | None | SRR8380868 | Sensitive | lineage1.1.2 | in | ERR202414 | Sensitive | lineage1.1.2 | None | SRR14520141 | Sensitive | lineage1.1.2 | None | SRR15014712 | MDR-TB | lineage1.1.2;lineage1.2.2.2 | None | SRR21732326 | Sensitive | lineage1.1.2 | None | SRR18149511 | Other | lineage1.1.2 | None | ERR4024972 | Sensitive | lineage4.3.2 | None | SRR6797542 | MDR-TB | lineage2.2.1 | None | SRR28045736 | Sensitive | lineage1.1.2 | None | ERR1034945 | Sensitive | lineage4.3.3;lineage4.4.1.2 | za | SRR15014638 | MDR-TB | lineage1.1.2 | None | SRR15014768 | RR-TB | lineage1.1.2 | None | SRR15014773 | MDR-TB | lineage1.1.2 | None | SRR15014787 | MDR-TB | lineage1.1.2 | None | SRR22137442 | Sensitive | lineage1.1.2 | None | SRR7069804 | Sensitive | lineage1.1.2 | None | ERR4819322 | Other | lineage1.1;lineage4 | None | ERR7902720 | Sensitive | lineage1.1.2 | None | SRR16057903 | Sensitive | lineage1.1.2 | None | ERR7902706 | Sensitive | lineage1.1.2 | None | SRR29053104 | HR-TB | lineage1.1.2 | None | ERR4818653 | Sensitive | lineage1.1.2 | None | SRR29772656 | RR-TB | lineage1.1.2 | None | ERR3275635 | Sensitive | lineage1.1.2 | nl | ERR13261304 | HR-TB | lineage4.3.3 | None | SRR22137390 | Sensitive | lineage1.1.2 | None | SRR22251430 | Sensitive | lineage1.1.2 | None | SRR29037025 | Sensitive | lineage4.3.4.2.1 | None | SRR26112736 | Other | lineage1.1.2 | None | ERR4814683 | Sensitive | lineage1.1;lineage4.1.2.1 | None | ERR270658 | Sensitive | lineage1.1.2 | None | SRR29772728 | MDR-TB | lineage1.1.2 | None | SRR11972238 | Sensitive | lineage1.1.2 | None | SRR10040337 | MDR-TB | lineage1.1.2 | None | SRR22137376 | Sensitive | lineage1.1.2 | None | ERR4819068 | Sensitive | lineage1.1;lineage4.1.3 | None | ERR4822101 | Sensitive | lineage1.1.2;lineage4.1 | None | SRR1172788 | Sensitive | lineage1.1.2 | None | SRR29772737 | MDR-TB | lineage1.1.2 | None | SRR29037024 | Sensitive | lineage4.3.4.2.1 | None | SRR28046030 | Sensitive | lineage1.1.2 | None | SRR28044503 | Sensitive | lineage3 | None | ERR4817692 | HR-TB | lineage1.1.2;lineage4 | None | SRR30182748 | Sensitive | lineage1.1.2 | None | ERR7902679 | Sensitive | lineage1.1.2 | None | SRR8380920 | Other | lineage1.1.2 | in | SRR29772662 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR22137452 | Sensitive | lineage1.1.2 | None | ERR2020046 | MDR-TB | lineage2.2.1 | None | SRR22250071 | Sensitive | lineage3 | None | ERR13273063 | Sensitive | lineage1.1.2 | None | SRR29231248 | Other | lineage1.1.2 | None | SRR28045599 | Sensitive | lineage1.1.2 | None | ERR4798448 | Other | lineage1.1.2 | in | ERR4798737 | Other | lineage1.1.2 | in | ERR4799574 | Sensitive | lineage1.1.2 | in | ERR4799575 | Sensitive | lineage1.1.2 | in | SRR6785287 | Sensitive | lineage4.3.3 | None | ERR4831356 | Sensitive | lineage1.1.2 | de | ERR4799452 | HR-TB | lineage1.1.2 | in | SRR11348179 | Sensitive | lineage1.1.2 | None | ERR4800310 | Sensitive | lineage1.1.2 | in | SRR28045879 | HR-TB | lineage1.1.2 | None | SRR28045635 | Sensitive | lineage1.1.2 | None | SRR28044315 | Sensitive | lineage1.1.2 | None | SRR28045623 | Sensitive | lineage1.1.2 | None | SRR28044305 | Sensitive | lineage1.1.2 | None | SRR28044510 | MDR-TB | lineage1.1.2 | None | SRR28045765 | Other | lineage1.1.2 | None | SRR28045729 | Sensitive | lineage1.1.2 | None | SRR28046037 | Other | lineage1.1.2 | None | SRR28045514 | Sensitive | lineage1.1.2 | None | SRR29772511 | MDR-TB | lineage1.1.2 | None | ERR046855 | MDR-TB | lineage1.1.2 | gb | ERR1555047 | MDR-TB | lineage4.8 | None | SRR25534213 | MDR-TB | lineage2.2.1 | None | SRR28045496 | RR-TB | lineage1.1.2 | None | ERR551388 | Sensitive | lineage1.1.2 | de | ERR400313 | Sensitive | lineage1.1.2 | gb | SRR2100433 | Sensitive | lineage1.1.2 | None | SRR2100526 | Sensitive | lineage1.1.2 | None | SRR2101145 | Sensitive | lineage1.1.2;lineage4 | None | ERR4816216 | Sensitive | lineage1.1.2;lineage4.1 | gb | ERR4816445 | Sensitive | lineage1.1.2 | gb | ERR2514640 | Sensitive | lineage1.1.2 | gb | ERR2512926 | Sensitive | lineage1.1.2 | gb | SRR6045803 | HR-TB | lineage1.1.2 | gb |
|---|
