EBG00000313325 - n.1443_1455delCTCGGGAGGGAGCinsACGTTTGTGGGGGGAGT
Drug resistance types
2 Sensitive
3 RR-TB
0 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 4 |
| lineage4.9 | 2 |
| lineage4.1.1.1 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.3;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.6 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 21 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7070329 | Other | lineage3 | None | SRR5818464 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR9117788 | Other | lineage3 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR4821007 | Other | lineage1.2.2.2 | None | ERR4820748 | Other | lineage3 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4817131 | Other | lineage3.1.3;lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4819518 | Sensitive | lineage4.1.1.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818785 | Sensitive | lineage4.1.2.1 | None | ERR4818507 | Other | lineage4.1.2.1 | None | SRR6044936 | Other | lineage4.6 | None | ERR4816462 | Other | lineage4.1.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | ERR4819528 | RR-TB | lineage3 | None |
|---|
