EBG00000313325 - n.504A>C
Drug resistance types
29 Sensitive
10 RR-TB
6 HR-TB
24 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 7 |
| lineage4.3.3 | 3 |
| lineage4.6.1 | 8 |
| lineage4.6.1.2 | 4 |
| lineage4.9 | 22 |
| lineage4.6.1.1 | 3 |
| lineage3.1.2.1 | 2 |
| lineage2.2.1 | 10 |
| 2 | |
| lineage2.2.1.2 | 1 |
| La1.8.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage5.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3 | 2 |
| lineage4.1.2 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.1.1.3 | 4 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 87 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SAMN02381037 | MDR-TB | lineage4.6.1 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None | ERR2747622 | Sensitive | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045162 | Sensitive | lineage4.9 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR245790 | Sensitive | None | SAMN02381047 | Sensitive | lineage4.6.1 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | ERR5162126 | Sensitive | lineage4.9 | None | ERR025890 | Sensitive | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | ERR5979784 | Sensitive | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR751338 | Other | lineage5.1.1 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2124087 | MDR-TB | lineage2.2.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR5979787 | Other | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR2124089 | MDR-TB | lineage2.2.1 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR9117694 | Sensitive | lineage3 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR970453 | RR-TB | lineage4.1.2 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | ERR970448 | RR-TB | lineage4.1.1.3 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | SRR1049622 | MDR-TB | lineage4.4.1.1 | None | SRR1049724 | MDR-TB | lineage4.6.1 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1049743 | Sensitive | lineage4.6.1 | None | SRR1062898 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1062927 | MDR-TB | lineage4.6.1 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1140740 | RR-TB | lineage4.6.1.2 | None | SRR1140677 | MDR-TB | lineage4.6.1 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140751 | MDR-TB | lineage4.4.1.1 | None | SRR1173310 | MDR-TB | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR11972165 | MDR-TB | lineage2.2.1.1 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972169 | HR-TB | lineage2.2 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR11972164 | MDR-TB | lineage2.2.1.1 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR14088382 | MDR-TB | lineage3 | None |
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