Rv0006 - c.1036_1038delCTAinsTG


Drug resistance types
1 Sensitive 6 RR-TB 18 HR-TB 10 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 80 Other
lineage Counts
lineage Count
lineage6.1.3 1
lineage2.2.1.1 4
lineage2.2.1 10
lineage4.9 20
lineage4.1.1.1 1
M.canetti;lineage4.9;lineage9 1
11
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.8 1
lineage2.1;lineage4.9;lineage6.3 7
La3;lineage4.9 5
lineage4.9;lineage6.3 3
lineage4.6.1.1 1
lineage2.1;lineage4.9 9
M.canetti;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage5.2 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.9;lineage9 1
lineage4.1.2.1 7
lineage4.7 2
lineage4.6.3;lineage4.9 1
lineage3 2
lineage2.1;lineage6.3 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.1.3 2
lineage4.8.1 1
lineage1.2.2.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
La3;lineage2.1;lineage4.9 1
lineage6.3.1 1
lineage2.1 1
La1.2.BCG;La1.8.1 1
lineage4.4.1.1 1
M.canetti;lineage1 1
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 117
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9787165 Other lineage6.1.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
ERR9787197 Other None
SRR3675275 Other lineage4.9 None
SRR3675549 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4819781 Other lineage2.2.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR1165628 Other La3;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675311 Other lineage4.9 None
SRR6046594 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR9786671 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR234659 HR-TB None
ERR2514692 Other None
SRR3675236 Other None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3797069 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR176751 HR-TB lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675457 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797201 Other lineage1.2.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180172 RR-TB lineage2.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR11252664 Other lineage2.2.1 None
SRR18213713 HR-TB None
ERR4816999 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
ERR702406 Other lineage2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675248 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None