Rv0006 - c.1036_1038delCTAinsTG
Drug resistance types
0 Sensitive
2 RR-TB
7 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.7 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.9 | 8 |
| La3;lineage4.9 | 2 |
| lineage2.2.1 | 3 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| 2 | |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.2.1.1 | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.1.3 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 38 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819932 | Other | lineage4.7 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046066 | Other | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR9787197 | Other | None | SRR3675275 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3797069 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR2514692 | Other | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None |
|---|
