Rv0006 - c.561C>G
Drug resistance types
7 Sensitive
5 RR-TB
9 HR-TB
27 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 9 |
| La3;M.canetti;lineage4.9 | 2 |
| lineage4.9 | 7 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 11 |
| lineage2.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.1.2.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| La3;lineage4.3.4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage1.1.2;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23861941 | Sensitive | lineage4.8 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR3675507 | RR-TB | lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR4821053 | RR-TB | lineage3 | None | ERR5866101 | MDR-TB | lineage4.8 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8665994 | RR-TB | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR18715047 | Sensitive | lineage4.8 | None | ERR400394 | Sensitive | lineage4.8 | gb | SRR13861224 | Sensitive | lineage4.9 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR2101278 | Sensitive | lineage4.8 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR5866102 | MDR-TB | lineage4.8 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR29681479 | Sensitive | lineage4.8 | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4817692 | MDR-TB | lineage1.1.2;lineage4 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR23862179 | Sensitive | lineage4.8 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR18714899 | Other | lineage4.8 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None |
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