lineage | Count |
---|---|
45 | |
lineage6.1.3 | 12 |
lineage4 | 4 |
La3 | 1 |
lineage2.2.1.2 | 2 |
lineage4.3.3 | 1 |
lineage2.2.2 | 1 |
lineage4.5 | 1 |
lineage4.9 | 2 |
lineage2 | 1 |
lineage4.9;La3 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage2.2.1 | 2 |
lineage4.3 | 1 |
lineage3.1.2 | 1 |
lineage1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | SRR1169194 | Other | None | ERR9787318 | Other | lineage6.1.3 | None | SRR1167384 | Other | lineage4 | None | ERR4811142 | MDR-TB | None | ERR736874 | HR-TB | None | ERR9787162 | Other | lineage6.1.3 | None | ERR9787200 | Other | lineage6.1.3 | None | ERR9787283 | Other | lineage6.1.3 | None | ERR9787278 | Other | lineage6.1.3 | None | ERR9787326 | Other | lineage6.1.3 | None | SRR1169249 | Other | La3 | None | SRR1172817 | HR-TB | None | SRR1169306 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173400 | Other | None | SRR1173142 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196494 | MDR-TB | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1184380 | HR-TB | None | SRR19303884 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR18054782 | MDR-TB | lineage2.2.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR26159043 | Other | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304025 | Other | lineage6.1.3 | None | SRR25827682 | Other | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675221 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675236 | HR-TB | None | ERR176751 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | SRR3742665 | HR-TB | None | SRR5341302 | HR-TB | None | ERR234659 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | ERR2515097 | Sensitive | lineage3.1.2 | None | SRR5341333 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6045028 | Sensitive | lineage1 | None | SRR6045010 | Other | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046066 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046362 | HR-TB | None | ERR502532 | HR-TB | None | SRR6789626 | Other | None | ERR3806815 | Other | lineage6.1.3 | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3804043 | Other | lineage6.1.3 | None | ERR3806635 | Other | lineage6.1.3 | None | SRR8217918 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | ERR3797069 | Other | None | ERR3804139 | Other | lineage6.1.3 | None | ERR3806593 | Other | lineage6.1.3 | None | ERR4800341 | Other | lineage3 | None | ERR473332 | Other | lineage4 | None | ERR4407463 | HR-TB | None | ERR5336148 | Other | None | ERR4810741 | HR-TB | None |
---|