lineage | Count |
---|---|
lineage2.2.1 | 12 |
lineage4.4.1.1 | 70 |
lineage1.1.2 | 2 |
lineage4.2.2 | 1 |
lineage4.1.1.3.1 | 55 |
lineage1.2.2.2 | 3 |
lineage2.2.2 | 4 |
lineage4.1.1 | 6 |
lineage4.1.2.1 | 20 |
lineage4.3.3 | 13 |
lineage4.9 | 3 |
lineage4.1.1.3 | 6 |
lineage3.1.2.1 | 1 |
lineage3 | 5 |
lineage4.8 | 1 |
lineage4.1.2 | 1 |
lineage4.8.2;lineage4.1.1.3.1 | 1 |
1 | |
lineage4.4.1.1.1 | 3 |
lineage2.2.1.1 | 2 |
lineage4.3.4.1 | 2 |
lineage3.1.2 | 1 |
lineage3.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.3.3;lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 216 |
ID | Drug resistance | Lineage | Country iso2 | ERR2516665 | Pre-XDR-TB | lineage2.2.1 | pe | ERR8975655 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4797319 | MDR-TB | lineage1.1.2 | in | ERR2510616 | Pre-XDR-TB | lineage4.2.2 | pk | ERR4830866 | MDR-TB | lineage4.4.1.1 | sz | ERR7911279 | MDR-TB | lineage2.2.1 | vn | ERR046795 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4819771 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4797117 | RR-TB | lineage1.2.2.2 | in | ERR4830850 | MDR-TB | lineage4.4.1.1 | sz | ERR552405 | MDR-TB | lineage4.4.1.1 | sz | ERR4830876 | MDR-TB | lineage4.4.1.1 | sz | SRR6824346 | MDR-TB | lineage2.2.2 | cn | ERR2510203 | MDR-TB | lineage4.1.1 | pe | ERR046792 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR038295 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR552193 | MDR-TB | lineage4.4.1.1 | sz | ERR2516437 | MDR-TB | lineage4.1.2.1 | pe | ERR4830874 | MDR-TB | lineage4.4.1.1 | sz | ERR2516831 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4814757 | MDR-TB | lineage4.4.1.1 | gb | ERR552484 | MDR-TB | lineage4.4.1.1 | sz | ERR8975695 | Pre-XDR-TB | lineage4.3.3 | None | ERR551014 | MDR-TB | lineage4.4.1.1 | sz | ERR552077 | MDR-TB | lineage4.4.1.1 | sz | ERR2514982 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4821423 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046790 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2707155 | MDR-TB | lineage4.9 | cd | ERR8975646 | MDR-TB | lineage4.1.1.3 | None | ERR552612 | MDR-TB | lineage4.4.1.1 | sz | ERR4811278 | RR-TB | lineage2.2.1 | cn | ERR038294 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4818880 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR552496 | MDR-TB | lineage4.4.1.1 | sz | ERR4796641 | MDR-TB | lineage3.1.2.1 | in | ERR550741 | MDR-TB | lineage4.4.1.1 | sz | ERR5917988 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR2099790 | MDR-TB | lineage4.1.2.1 | es | SRR6824408 | MDR-TB | lineage2.2.1 | cn | ERR046911 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2515294 | MDR-TB | lineage4.1.1.3 | za | ERR4796615 | MDR-TB | lineage1.2.2.2 | in | ERR4830849 | MDR-TB | lineage4.4.1.1 | sz | SRR2469373 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR751410 | MDR-TB | lineage4.1.1 | pe | ERR4830861 | MDR-TB | lineage4.4.1.1 | sz | SRR2100867 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4829131 | Pre-XDR-TB | lineage3 | pk | ERR552823 | MDR-TB | lineage4.4.1.1 | sz | ERR046786 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR8975065 | MDR-TB | lineage4.4.1.1 | None | ERR4799897 | MDR-TB | lineage3 | in | ERR552573 | MDR-TB | lineage4.4.1.1 | None | SRR20139562 | RR-TB | lineage4.8 | None | ERR7911101 | MDR-TB | lineage2.2.1 | vn | ERR3287468 | MDR-TB | lineage4.1.2.1 | pe | ERR8975639 | MDR-TB | lineage4.4.1.1 | None | SRR1723430 | MDR-TB | lineage2.2.2 | cn | ERR553242 | MDR-TB | lineage4.4.1.1 | sz | SAMN02403625 | Pre-XDR-TB | lineage4.4.1.1 | sz | ERR046785 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR550861 | MDR-TB | lineage4.4.1.1 | sz | ERR552070 | MDR-TB | lineage4.4.1.1 | sz | ERR552083 | MDR-TB | lineage4.4.1.1 | sz | ERR046793 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4812268 | MDR-TB | lineage4.3.3 | None | SRR2100826 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR2101039 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2099786 | MDR-TB | lineage4.1.2.1 | es | ERR775314 | MDR-TB | lineage4.1.1.3 | pe | ERR4829486 | Pre-XDR-TB | lineage4.1.2 | it | ERR2099787 | RR-TB | lineage4.1.2.1 | es | ERR046800 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR553221 | MDR-TB | lineage4.4.1.1 | sz | SAMN02053804 | MDR-TB | lineage4.3.3 | za | ERR552765 | MDR-TB | lineage4.4.1.1 | sz | ERR2514666 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR552150 | MDR-TB | lineage4.4.1.1 | sz | ERR552672 | MDR-TB | lineage4.4.1.1 | sz | ERR551536 | MDR-TB | lineage4.4.1.1 | sz | ERR4830872 | MDR-TB | lineage4.4.1.1 | sz | SRR6824582 | MDR-TB | lineage2.2.2 | cn | ERR552745 | MDR-TB | lineage4.4.1.1 | sz | ERR2099781 | Pre-XDR-TB | lineage4.1.2.1 | es | ERR552118 | MDR-TB | lineage4.4.1.1 | None | SRR2100893 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR551758 | MDR-TB | lineage4.4.1.1 | sz | ERR2184677 | MDR-TB | lineage4.1.1 | pe | SRR3675218 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2513859 | Pre-XDR-TB | lineage4.8.2;lineage4.1.1.3.1 | gb | ERR2099785 | MDR-TB | lineage4.1.2.1 | es | ERR2099789 | MDR-TB | lineage4.1.2.1 | es | ERR4830857 | MDR-TB | lineage4.4.1.1 | sz | SAMN03246362 | RR-TB | lineage2.2.1 | cn | ERR4830865 | MDR-TB | lineage4.3.3 | sz | SRR3055242 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4830862 | MDR-TB | lineage4.4.1.1 | sz | ERR4830853 | MDR-TB | lineage4.4.1.1 | sz | SAMN02585973 | Pre-XDR-TB | lineage4.3.3 | za | SAMEA104221066 | MDR-TB | lineage4.1.2.1 | es | SRR6824450 | RR-TB | lineage2.2.1 | cn | ERR2099788 | MDR-TB | lineage4.1.2.1 | es | SRR2100923 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR046913 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SAMN02350481 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830867 | MDR-TB | lineage4.4.1.1 | sz | ERR4830873 | MDR-TB | lineage4.4.1.1 | sz | ERR2099778 | RR-TB | lineage4.1.2.1 | es | ERR4830859 | MDR-TB | lineage4.4.1.1 | sz | ERR046784 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR751413 | MDR-TB | lineage4.1.1 | pe | ERR4830879 | MDR-TB | lineage4.4.1.1 | sz | ERR552870 | MDR-TB | lineage4.4.1.1 | sz | ERR4821219 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR553357 | MDR-TB | lineage4.4.1.1 | sz | ERR2516816 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR8976107 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR552987 | MDR-TB | lineage4.4.1.1 | sz | SRR8791302 | RR-TB | None | ERR551609 | MDR-TB | lineage4.4.1.1 | sz | ERR4797962 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR8975683 | RR-TB | lineage4.4.1.1.1 | None | ERR038297 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4830878 | MDR-TB | lineage4.4.1.1 | sz | ERR046787 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4829130 | Pre-XDR-TB | lineage1.2.2.2 | pk | ERR2514947 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR552491 | MDR-TB | lineage4.4.1.1 | sz | ERR779907 | MDR-TB | lineage4.3.3 | pe | ERR551280 | MDR-TB | lineage4.4.1.1 | sz | SRR2100721 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4812160 | MDR-TB | lineage4.1.2.1 | pe | ERR2513944 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4830852 | MDR-TB | lineage4.4.1.1 | sz | ERR2099791 | MDR-TB | lineage4.1.2.1 | es | ERR4822260 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4810982 | Pre-XDR-TB | lineage2.2.1 | cn | ERR552254 | MDR-TB | lineage4.4.1.1 | None | ERR4830871 | MDR-TB | lineage2.2.1.1 | sz | ERR553230 | MDR-TB | lineage4.4.1.1 | sz | ERR3287712 | Pre-XDR-TB | lineage4.1.1 | pe | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SRR2100239 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR6046819 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2099783 | Pre-XDR-TB | lineage4.1.2.1 | es | ERR046794 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2513631 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR552540 | MDR-TB | lineage4.4.1.1 | sz | ERR4830860 | MDR-TB | lineage4.4.1.1 | sz | ERR038296 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2514424 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SRR2100283 | MDR-TB | lineage4.3.3 | None | ERR2706982 | MDR-TB | lineage4.3.4.1 | cd | ERR1035073 | Pre-XDR-TB | lineage2.2.1.1 | za | ERR4797926 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR4830864 | MDR-TB | lineage4.4.1.1 | sz | ERR4817221 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR552754 | MDR-TB | lineage4.4.1.1 | sz | ERR2513957 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR1213896 | MDR-TB | lineage4.1.2.1 | pe | SAMN02585964 | Pre-XDR-TB | lineage4.3.3 | za | ERR4800565 | Pre-XDR-TB | lineage3.1.2 | in | SRR2100389 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR2101261 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4797739 | Pre-XDR-TB | lineage3.1 | in | ERR552822 | MDR-TB | lineage4.4.1.1 | sz | ERR552637 | MDR-TB | lineage4.4.1.1 | sz | ERR551488 | MDR-TB | lineage4.4.1.1 | sz | ERR4828736 | MDR-TB | lineage2.2.1 | None | ERR2513160 | Pre-XDR-TB | lineage3 | gb | SAMN03246276 | MDR-TB | lineage2.2.1 | cn | ERR4819736 | Pre-XDR-TB | lineage3 | gb | ERR4812743 | MDR-TB | lineage4.1.1 | pe | ERR046788 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SAMN02586063 | MDR-TB | lineage4.3.3 | za | ERR2706940 | MDR-TB | lineage4.9 | cd | ERR4818346 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2099775 | RR-TB | lineage4.1.2.1 | es | ERR4816876 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2099776 | MDR-TB | lineage4.1.2.1 | es | ERR4811085 | MDR-TB | lineage2.2.1 | cn | SAMN02585965 | Pre-XDR-TB | lineage4.3.3 | za | ERR4810902 | RR-TB | lineage2.2.1 | None | ERR4830863 | MDR-TB | lineage4.4.1.1 | sz | ERR8975692 | MDR-TB | lineage4.4.1.1 | None | ERR552487 | MDR-TB | lineage4.4.1.1 | sz | ERR8975000 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR2099972 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4830560 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR2707233 | MDR-TB | lineage4.3.4.1 | cd | ERR1035011 | MDR-TB | lineage4.3.2.1 | za | ERR4830877 | MDR-TB | lineage4.4.1.1 | sz | ERR552124 | MDR-TB | lineage4.4.1.1 | sz | SAMN02585978 | Pre-XDR-TB | lineage4.3.3 | za | ERR4814380 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4797916 | Pre-XDR-TB | lineage3 | in | ERR4821985 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2099777 | MDR-TB | lineage4.1.2.1 | es | ERR8975801 | Pre-XDR-TB | lineage4.3.3;lineage2.2.1.1 | None | ERR4817291 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR551969 | MDR-TB | lineage4.4.1.1 | sz | ERR4818967 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4830875 | MDR-TB | lineage4.4.1.1 | sz | ERR2099782 | Pre-XDR-TB | lineage4.1.2.1 | es | SRR5007178 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR551195 | MDR-TB | lineage4.4.1.1 | sz | ERR4830868 | MDR-TB | lineage4.4.1.1 | sz | ERR4830870 | MDR-TB | lineage4.4.1.1 | sz | ERR4813863 | MDR-TB | lineage4.3.3 | br | SAMN02599026 | MDR-TB | lineage1.1.2 | in | ERR4830848 | MDR-TB | lineage4.4.1.1 | sz | ERR046789 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2707006 | MDR-TB | lineage4.9 | cd |
---|