ERR552540
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4812160
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR2497872
|
RR-TB
|
lineage4.9
|
None
|
ERR6052032
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR4796615
|
MDR-TB
|
lineage1.2.2.2
|
in
|
SRR1181008
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR9588015
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR2101039
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR11488896
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1140949
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR10040391
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR4797926
|
Pre-XDR-TB
|
lineage4.1.2.1
|
in
|
ERR552078
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR7070133
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR2513957
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR2884681_ERR2099784
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4830865
|
MDR-TB
|
lineage4.3.3
|
sz
|
ERR4817221
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR4797739
|
Pre-XDR-TB
|
lineage3.1
|
in
|
ERR4800565
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR551488
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR775314
|
RR-TB
|
lineage4.1.1.3
|
pe
|
SRR1181355
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR5917988
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR1180266
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4819736
|
Pre-XDR-TB
|
lineage3
|
gb
|
ERR11488884
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SRR9971250
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR18213825
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR11488763
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR9971126
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2497887
|
MDR-TB
|
lineage4.9
|
None
|
SRR26159062
|
MDR-TB
|
|
None
|
ERR11488382
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SAMEA2535221
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR270794
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR386895
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR2497891
|
MDR-TB
|
lineage4.9
|
None
|
SRR14802234
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8975801
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage4.3.3
|
None
|
ERR2099782
|
Pre-XDR-TB
|
lineage4.1.2.1
|
es
|
ERR4816181
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR4813863
|
MDR-TB
|
lineage4.3.3
|
br
|
ERR4830849
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR552745
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR751410
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR10748457
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR4830555
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR4830864
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR1180422
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29056138
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9588008
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR11662616
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR9588014
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9588003
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR25827357
|
XDR-TB
|
lineage1.1.2;lineage2.2.1;lineage3
|
None
|
ERR2099777
|
MDR-TB
|
lineage4.1.2.1
|
es
|
ERR4020189
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR22873596
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR21798280
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14088389
|
MDR-TB
|
lineage3
|
None
|
ERR6052040
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR551969
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR294247
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR2516816
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR551014
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR046784
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR4831097
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4553536
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552612
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR117676
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR552124
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR552986
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4796641
|
MDR-TB
|
lineage3.1.2.1
|
in
|
SRR6930927
|
MDR-TB
|
lineage1.2.1.2
|
None
|
SRR29231854
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR11488836
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR9993035
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4819741
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR13260667
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
SAMN03246362
|
RR-TB
|
lineage2.2.1
|
cn
|
SRR6797272
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR1181172
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28044666
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR9588029
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11773791
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2099787
|
RR-TB
|
lineage4.1.2.1
|
es
|
ERR553242
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR228114
|
Pre-XDR-TB
|
lineage4.1.1.3.1;lineage4.8.2
|
None
|
SRR28045025
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7361993
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR9971248
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13291181
|
RR-TB
|
lineage4.1.1
|
None
|
SRR9588012
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9588022
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9971235
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR26159050
|
MDR-TB
|
lineage4.9
|
None
|
ERR13260900
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR13288955
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR2099781
|
Pre-XDR-TB
|
lineage4.1.2.1
|
es
|
SRR28393642
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR046786
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR386878
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR9588017
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9588028
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4830877
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR27241220
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2515294
|
MDR-TB
|
lineage4.1.1.3
|
za
|
SRR28385876
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR2884653
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR11488351
|
MDR-TB
|
lineage4.9
|
None
|
SRR21732072
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR552253
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR13288944
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR6866606
|
MDR-TB
|
lineage4.1.1
|
None
|
SRR28393312
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2497900
|
MDR-TB
|
lineage4.9
|
None
|
ERR5866127
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1180998
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR1181108
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR6964492
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4818346
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR3105802
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4830854
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4830869
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488765
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR552149
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR13290975
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR038297
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR10748162
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR1723621
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1172916
|
RR-TB
|
lineage4.3.3;lineage4.9
|
None
|
ERR7911101
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR11488470
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR3287712
|
Pre-XDR-TB
|
lineage4.1.1
|
pe
|
SRR21576586
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865548
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2099791
|
MDR-TB
|
lineage4.1.2.1
|
es
|
ERR4810982
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR11488997
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR5758473
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR4813839
|
Pre-XDR-TB
|
lineage4.1.2
|
None
|
ERR11488890
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SRR6824408
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR9588023
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SAMN02360590
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR2100239
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR11044692
|
MDR-TB
|
lineage4.8
|
None
|
SRR29289332
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR29289128
|
MDR-TB
|
lineage3
|
None
|
SRR2100283
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR114434
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2199994
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2513859
|
Pre-XDR-TB
|
lineage4.1.1.3.1;lineage4.8.2
|
gb
|
ERR9993022
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SAMN02585978
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR4828736
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665768
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11488858
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4811085
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR11488969
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR2497906
|
MDR-TB
|
lineage4.9
|
None
|
SRR9971042
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR8975692
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR552487
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR19295646
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR351924
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR038295
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR4830871
|
MDR-TB
|
lineage2.2.1.1
|
sz
|
ERR10748129
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR8975000
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1180488
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4821985
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR14801568
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR12420642
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552821
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR9993052
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4797319
|
MDR-TB
|
lineage1.1.2
|
in
|
ERR2513631
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR10185952
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29017599
|
MDR-TB
|
lineage1.1.3.1
|
None
|
ERR2707233
|
MDR-TB
|
lineage4.3.4.1
|
cd
|
SRR29016744
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830870
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4830848
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR552119
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR552491
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SAMN02599026
|
MDR-TB
|
lineage1.1.2
|
in
|
SRR26936940
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR552573
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4830520
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2707006
|
MDR-TB
|
lineage4.9
|
cd
|
ERR4830861
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4830872
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR11488616
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488623
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SRR9588018
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR2101261
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR046795
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR9992916
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR2706982
|
MDR-TB
|
lineage4.3.4.1
|
cd
|
SRR1181262
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR11488463
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2497883
|
RR-TB
|
lineage4.9
|
None
|
SRR19325547
|
RR-TB
|
lineage4.1.1
|
None
|
SRR19318144
|
RR-TB
|
lineage4.1.1
|
None
|
ERR4819771
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR29231412
|
RR-TB
|
lineage1.1.2
|
None
|
ERR11488349
|
MDR-TB
|
lineage4.9
|
None
|
ERR553222
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1019143
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR552823
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR552987
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4814757
|
MDR-TB
|
lineage4.4.1.1
|
gb
|
ERR4799775
|
Pre-XDR-TB
|
lineage3.1.2.1
|
None
|
ERR11488405
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR2099972
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR22424876
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11488791
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2099790
|
MDR-TB
|
lineage4.1.2.1
|
es
|
SRR1013633
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR2100867
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR551757
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR552254
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR5153074
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR12796605
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR28044659
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28393564
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR551194
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR9993053
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR5865549
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02585973
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR2497899
|
MDR-TB
|
lineage4.9
|
None
|
ERR2510616
|
Pre-XDR-TB
|
lineage4.2.2
|
pk
|
ERR4829130
|
Pre-XDR-TB
|
lineage1.2.2.2
|
pk
|
ERR4829131
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR13289264
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR13289514
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR13288835
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR13289023
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR751413
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR29681329
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR13289558
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR046790
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR16089390
|
RR-TB
|
lineage4.1.1
|
None
|
SRR29289365
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR2513160
|
Pre-XDR-TB
|
lineage3
|
gb
|
ERR4553714
|
MDR-TB
|
lineage4.8
|
None
|
ERR8976107
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR1180445
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR17856673
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR11488941
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488380
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SRR24827278
|
RR-TB
|
lineage4.1.1
|
None
|
ERR4830850
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4830867
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR6964623
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR29231451
|
RR-TB
|
lineage3
|
None
|
SRR9588005
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR13259975
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR552405
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR270682
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR278536
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SAMEA2534447
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2497901
|
MDR-TB
|
lineage4.9
|
None
|
SRR9588020
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11043052
|
MDR-TB
|
lineage2.2.1;lineage4
|
None
|
ERR11488352
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488657
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488350
|
MDR-TB
|
lineage4.9
|
None
|
ERR5865505
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR046911
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR8975655
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR8975639
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR19276633
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4814380
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR20139562
|
RR-TB
|
lineage4.8
|
None
|
ERR2099786
|
MDR-TB
|
lineage4.1.2.1
|
es
|
ERR551280
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SAMN02585964
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR4821850
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR4822260
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR29017403
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR2099775
|
RR-TB
|
lineage4.1.2.1
|
es
|
ERR4812743
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR6785289
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2099789
|
MDR-TB
|
lineage4.1.2.1
|
es
|
SAMEA2534888
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488389
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR3132140
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR553243
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2200094
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR8975695
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR552637
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR11662607
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1013634
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR7070346
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR9992922
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR9992968
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SAMEA104221066
|
MDR-TB
|
lineage4.1.2.1
|
es
|
ERR046793
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR4812268
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4830852
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR403383
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR2099780
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR2514424
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR13284693
|
MDR-TB
|
lineage2.2.1;lineage4
|
None
|
ERR9993245
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29055959
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29440742
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR046787
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR5866125
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2200058
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR270716
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR26159037
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR2497903
|
MDR-TB
|
lineage4.9
|
None
|
SRR1196555
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN03246276
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR046788
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR10808821
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR2099784
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR21798458
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813819
|
Pre-XDR-TB
|
lineage4.4.1
|
None
|
ERR2497875
|
RR-TB
|
lineage4.9
|
None
|
ERR270766
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR4830560
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
SAMEA2534740
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4020188
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR5866126
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9588024
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4817291
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR9992661
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7737826
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9588019
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9588025
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR24256303
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9992909
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR5865504
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4020183
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4830858
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR551195
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR046789
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR038294
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR038296
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR2516665
|
Pre-XDR-TB
|
lineage2.2.1
|
pe
|
SRR18149499
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4830866
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR2510203
|
MDR-TB
|
lineage4.1.1
|
pe
|
SRR9588026
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488958
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR2497886
|
MDR-TB
|
lineage4.9
|
None
|
ERR552193
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR13232714
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516437
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR2516831
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR2497885
|
RR-TB
|
lineage4.9
|
None
|
ERR2497876
|
MDR-TB
|
lineage4.9
|
None
|
SRR26159067
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13260876
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2707155
|
MDR-TB
|
lineage4.9
|
cd
|
ERR4797916
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR4799897
|
MDR-TB
|
lineage3
|
in
|
ERR552118
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR046792
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR3077985
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR4830860
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4830874
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR8975646
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR2099783
|
Pre-XDR-TB
|
lineage4.1.2.1
|
es
|
ERR552484
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4020186
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SAMN02585965
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
ERR2099788
|
MDR-TB
|
lineage4.1.2.1
|
es
|
ERR11488407
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR8774131
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR552572
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR228132
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR1183101
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2497878
|
MDR-TB
|
lineage4.9
|
None
|
ERR2497882
|
RR-TB
|
lineage4.9
|
None
|
SRR29096563
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR9993015
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2497898
|
MDR-TB
|
lineage4.9
|
None
|
ERR023197
|
MDR-TB
|
lineage4.8
|
None
|
ERR2497889
|
MDR-TB
|
lineage4.9
|
None
|
ERR552754
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR553230
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR18213684
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR9993080
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28045691
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28393539
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28385882
|
MDR-TB
|
lineage2.2.2
|
None
|
SAMEA2534689
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SAMEA2535241
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR28045001
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
ERR2514982
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR9588027
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR30340072
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR1183967
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR17856654
|
Pre-XDR-TB
|
lineage3.1.2.1
|
None
|
SRR6785168
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7070077
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR4830876
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR9588013
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9588021
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR13260890
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811278
|
RR-TB
|
lineage2.2.1
|
cn
|
SRR1180157
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR9992651
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9993210
|
RR-TB
|
lineage2.2.1.1
|
None
|
SAMN02586063
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR2469373
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR552496
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR9971193
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR2199748
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488401
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR26159044
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR11348154
|
RR-TB
|
lineage1.1.2
|
None
|
ERR9992988
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR023198
|
MDR-TB
|
lineage4.8
|
None
|
ERR046785
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR2514666
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR5007178
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR28385881
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR2099785
|
MDR-TB
|
lineage4.1.2.1
|
es
|
ERR13286105
|
MDR-TB
|
lineage1.1.3.2
|
None
|
ERR4830851
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR22461579
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4020185
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR13292582
|
MDR-TB
|
lineage3
|
None
|
ERR046794
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR4830862
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR11349137
|
RR-TB
|
lineage4.4.1.1.1
|
None
|
SRR25827597
|
Pre-XDR-TB
|
lineage3.1.2.1
|
None
|
ERR13276352
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR1723523
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11488859
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21798279
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830855
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR8975065
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488861
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR3287468
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SRR9588011
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1723430
|
MDR-TB
|
lineage2.2.2
|
cn
|
ERR11465836
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR550861
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR552070
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR552083
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4830856
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488670
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR833196
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866266
|
RR-TB
|
lineage4.3.2
|
None
|
ERR2497893
|
MDR-TB
|
lineage4.9
|
None
|
SRR29056162
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4829486
|
Pre-XDR-TB
|
lineage4.1.2
|
it
|
ERR11488353
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SRR26159056
|
MDR-TB
|
lineage4.9
|
None
|
ERR552765
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR1180353
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR25827749
|
XDR-TB
|
lineage2.2.1;lineage3;lineage4
|
None
|
ERR551536
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4020184
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2497881
|
MDR-TB
|
lineage4.9
|
None
|
SRR10147682
|
MDR-TB
|
lineage4.5
|
None
|
ERR4816876
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR1180281
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29231821
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR10397141
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8774352
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232711
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13266744
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR551970
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2497879
|
MDR-TB
|
lineage4.9
|
None
|
ERR2200022
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR230097
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR117688
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR9588016
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR6046819
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR4818967
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR9588007
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR10809080
|
RR-TB
|
lineage2.1
|
None
|
SRR9971044
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR29016883
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR1213896
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR4020187
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SAMEA2534974
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488900
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SRR7070423
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR4830873
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SAMN02350481
|
Pre-XDR-TB
|
lineage4.3.3
|
za
|
SRR14807572
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6824346
|
MDR-TB
|
lineage2.2.2
|
cn
|
ERR4423542
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR29231301
|
MDR-TB
|
lineage4.9
|
None
|
ERR552870
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR551758
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR8774129
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR552672
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR552822
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR9121354
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR2100893
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR387052
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
DRR130205
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR20969598
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR779907
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1181145
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR278519
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR552876
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4553862
|
RR-TB
|
lineage1.2.2.2
|
None
|
SRR1180429
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SAMN02053804
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR3675218
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR9588004
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR29231316
|
MDR-TB
|
lineage4.9
|
None
|
SRR19295645
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR2497874
|
RR-TB
|
lineage4.9
|
None
|
SRR3055242
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR1035011
|
MDR-TB
|
lineage4.3.2.1
|
za
|
ERR4020182
|
MDR-TB
|
lineage4.3.4.2.1;lineage4.4.1.1
|
None
|
ERR13291008
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2100923
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR046913
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR8665770
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4830868
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR11488638
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11488390
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR25827488
|
MDR-TB
|
lineage1.2.2.2;lineage4.3.3
|
None
|
ERR2099778
|
RR-TB
|
lineage4.1.2.1
|
es
|
SRR25207235
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR553357
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SAMN02403625
|
Pre-XDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4821219
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR2497895
|
RR-TB
|
lineage4.9
|
None
|
SRR24256170
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11488402
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827513
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
ERR9992748
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR550741
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4830863
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR2514947
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR9971241
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4553584
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR11662200
|
MDR-TB
|
lineage1.1.1
|
None
|
SRR9588010
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4797117
|
RR-TB
|
lineage1.2.2.2
|
in
|
ERR4810902
|
RR-TB
|
lineage2.2.1
|
None
|
SRR28044765
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4830857
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR1175055
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2706940
|
MDR-TB
|
lineage4.9
|
cd
|
SRR2100826
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR13260901
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR553221
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4817206
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046800
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR4821423
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR833100
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR14088352
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
SRR13870419
|
XDR-TB
|
lineage4.1.1
|
None
|
ERR2497897
|
MDR-TB
|
lineage4.9
|
None
|
ERR4553501
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR2100721
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
SRR1723524
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4818546
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR4818880
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
SRR1184115
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2184677
|
MDR-TB
|
lineage4.1.1
|
pe
|
ERR4423541
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR9992708
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993075
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR9992923
|
XDR-TB
|
lineage4.4.1.1
|
None
|
SRR12420405
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11488985
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR26159057
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR2497880
|
RR-TB
|
lineage4.9
|
None
|
SRR7069358
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR4830853
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR9588006
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SAMEA2534323
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR9588009
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR7070080
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR11488889
|
MDR-TB
|
lineage4.9
|
None
|
SRR6824450
|
RR-TB
|
lineage2.2.1
|
cn
|
ERR2199767
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR29289374
|
XDR-TB
|
lineage3
|
None
|
ERR9027252
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2497884
|
RR-TB
|
lineage4.9
|
None
|
SRR1049005
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1169491
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR9121553
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR386856
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR4830879
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR11043528
|
MDR-TB
|
lineage4.8
|
None
|
ERR552764
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR8975913
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR25207150
|
Pre-XDR-TB
|
lineage4.5
|
None
|
ERR13260898
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR2884681
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR266577
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
None
|
ERR11488824
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR551609
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR1172157
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4797962
|
XDR-TB
|
lineage4.1.1.3
|
in
|
SRR9971043
|
XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR552150
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR4830878
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR6866737
|
RR-TB
|
lineage4.3.2
|
None
|
ERR8975683
|
RR-TB
|
lineage4.4.1.1.1
|
None
|
ERR11488951
|
XDR-TB
|
lineage4.4.1.1
|
None
|
ERR552488
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2099776
|
MDR-TB
|
lineage4.1.2.1
|
es
|