Rv0676c - c.2361C>T


Drug resistance types
11 Sensitive 0 RR-TB 26 HR-TB 8 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 6 Other
lineage Counts
lineage Count
lineage4.9 23
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.9 4
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 3
lineage2.1;lineage4.9 1
La1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.2;lineage4.9 1
1
La3;M.canetti;lineage2.1;lineage3.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage6.3 1
La1;lineage4.1.2 1
lineage2.1;lineage2.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 52
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341469 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341384 HR-TB lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR137286 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR1063896 Sensitive None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12416842 HR-TB lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR5341453 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR736834 Sensitive lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None