SRR6485122
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6484999
|
HR-TB
|
lineage4.8
|
None
|
ERR2229746
|
Sensitive
|
lineage4.8;lineage4.9
|
None
|
ERR2229360
|
Sensitive
|
lineage4.8
|
None
|
ERR552676
|
Sensitive
|
lineage4.5
|
de
|
SRR13986562
|
Other
|
La1.2
|
None
|
SRR22251189
|
Sensitive
|
lineage4.8
|
None
|
ERR2229310
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229114
|
Sensitive
|
lineage4.8
|
dk
|
ERR2517431
|
Sensitive
|
lineage4.1.2.1
|
nl
|
ERR4830824
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
SRR6484881
|
Sensitive
|
lineage4.3.3
|
None
|
ERR2229367
|
Sensitive
|
lineage4.8
|
dk
|
SRR22249419
|
Sensitive
|
lineage3
|
None
|
ERR4827910
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR8600120
|
Other
|
La1.8.1
|
None
|
SRR6785182
|
Other
|
lineage4.2.1.1
|
None
|
ERR1465979_ERR1465871
|
HR-TB
|
lineage4.8
|
None
|
ERR552541
|
Sensitive
|
lineage4.3.3
|
de
|
SRR3085281
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11043121
|
MDR-TB
|
lineage4.6.5
|
None
|
ERR2229569
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229161
|
Sensitive
|
lineage4.8
|
None
|
SRR5818676
|
Other
|
M.canetti
|
dj
|
ERR551278
|
Sensitive
|
lineage4.8
|
None
|
SRR6785377
|
HR-TB
|
lineage4.3.3
|
None
|
ERR2229763
|
Sensitive
|
lineage4.8
|
dk
|
ERR4830802
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
SRR22249886
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR552855
|
Sensitive
|
lineage4.7
|
None
|
SRR9940980
|
Sensitive
|
lineage4.9
|
None
|
ERR2229397
|
Sensitive
|
lineage4.8
|
None
|
ERR2229382
|
Sensitive
|
lineage4.8
|
None
|
ERR4772229
|
Other
|
La1.2
|
None
|
SRR22249775
|
Sensitive
|
lineage4.3
|
None
|
ERR2229497
|
Sensitive
|
lineage4.8
|
None
|
ERR2229574
|
Sensitive
|
lineage4.8
|
None
|
SRR6484880
|
Sensitive
|
lineage4.8
|
None
|
SRR15600361
|
MDR-TB
|
lineage4.8
|
None
|
ERR2229341
|
Sensitive
|
lineage4.8
|
dk
|
ERR1465731
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR15661596
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR553159
|
Other
|
lineage2.2.1
|
de
|
ERR2229327
|
Sensitive
|
lineage4.8
|
dk
|
ERR9125428
|
Sensitive
|
lineage4.8
|
None
|
SRR21733023
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8025752
|
XDR-TB
|
lineage2.2.2
|
None
|
SRR15600358
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR2229683
|
Sensitive
|
lineage4.8
|
dk
|
SRR6785214
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229363
|
Sensitive
|
lineage4.8
|
None
|
SRR22251773
|
Sensitive
|
lineage2.2.1
|
None
|
SRR8600121
|
Other
|
La1.8.1
|
None
|
ERR4827448
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6485152
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3132162
|
Sensitive
|
lineage4.1.2
|
None
|
ERR4827806
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229488
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229626
|
Sensitive
|
lineage4.8
|
dk
|
SRR11972280
|
HR-TB
|
lineage1.1.3.1
|
None
|
SRR12882369
|
Sensitive
|
lineage3.1.1
|
None
|
SRR6484863
|
Sensitive
|
lineage4.8
|
None
|
ERR11466470
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR13232448
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22251165
|
Sensitive
|
lineage1.1.1
|
None
|
ERR2229343
|
Sensitive
|
lineage4.8
|
dk
|
ERR2041706
|
MDR-TB
|
lineage2.2.1
|
rs
|
ERR2229055
|
Sensitive
|
lineage4.8
|
None
|
SRR22251187
|
Sensitive
|
lineage4.3.3
|
None
|
SRR22461614
|
HR-TB
|
lineage4.3.3
|
None
|
ERR13289436
|
HR-TB
|
lineage4.1
|
None
|
ERR13289447
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13289460
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR13289472
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29440612
|
Sensitive
|
lineage3
|
None
|
SRR29441068
|
Sensitive
|
lineage2.2.1
|
None
|
SRR29441090
|
HR-TB
|
lineage2.2.2
|
None
|
SRR30111477
|
Sensitive
|
lineage4.8
|
None
|
SRR29831045
|
Other
|
lineage4.3.4.2
|
None
|
SRR29126450
|
Sensitive
|
lineage4.2.2.2
|
None
|
SRR13180377
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR1791768
|
Other
|
La1.7.1
|
None
|
ERR2229581
|
Sensitive
|
lineage4.8
|
None
|
SRR1002684
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR27107246
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR553280
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR6785228
|
Sensitive
|
lineage4.8
|
None
|
SRR4034384
|
Sensitive
|
lineage4.1.2
|
za
|
SRR6785534
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2510717
|
MDR-TB
|
lineage2.2.1
|
it
|
ERR3132117
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR6207273
|
Sensitive
|
lineage2.2.1
|
None
|
SRR22250037
|
Sensitive
|
lineage4.1.2
|
None
|
SRR22249412
|
MDR-TB
|
lineage3
|
None
|
ERR2516124
|
Sensitive
|
lineage4.3.2
|
None
|
ERR1465978_ERR1465867
|
Sensitive
|
lineage4.8
|
None
|
SRR22249895
|
Sensitive
|
lineage4.5
|
None
|
SRR5818567
|
Other
|
M.canetti
|
dj
|
SRR6484925
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2229345
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229467
|
Sensitive
|
lineage4.8
|
dk
|
SRR6257041
|
HR-TB
|
lineage4.3.3
|
None
|
SRR7851302
|
Other
|
La1.2
|
None
|
ERR2229525
|
Sensitive
|
lineage4.8
|
dk
|
SRR5431711
|
Other
|
La1.8.1
|
None
|
ERR2229744
|
Sensitive
|
lineage4.8
|
None
|
ERR2229434
|
Sensitive
|
lineage4.8
|
dk
|
SRR16058070
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
SRR6785181
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6485016
|
MDR-TB
|
lineage2.2.1;lineage4.6.1.2
|
None
|
SRR11972431
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR6785151
|
Sensitive
|
lineage4.8
|
None
|
ERR9125432
|
Sensitive
|
lineage4.8
|
None
|
SRR6785220
|
HR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR2229351
|
Sensitive
|
lineage4.8
|
None
|
ERR2199843
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2120269
|
MDR-TB
|
lineage4.6.5
|
None
|
ERR4276853
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR2229474
|
Sensitive
|
lineage4.8
|
dk
|
SRR6785524
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22250151
|
Sensitive
|
lineage3
|
None
|
SRR6785306
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229637
|
Sensitive
|
lineage4.8
|
dk
|
ERR3132237
|
Sensitive
|
lineage1.1.3
|
None
|
SRR6257061
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2229353
|
Sensitive
|
lineage4.8
|
dk
|
SRR6485013
|
Sensitive
|
lineage4.8
|
None
|
ERR7363125
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR2229361
|
Sensitive
|
lineage4.8
|
None
|
SRR6785378
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7069291
|
Sensitive
|
lineage4.8
|
None
|
ERR2229357
|
Sensitive
|
lineage4.8
|
dk
|
SRR8600132
|
Other
|
La1.8.1
|
None
|
SAMEA2534018
|
MDR-TB
|
lineage2.2.1.1
|
de
|
SRR9940985
|
Sensitive
|
lineage4.9
|
None
|
SRR6785221
|
Sensitive
|
lineage4.8
|
None
|
ERR2229694
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229319
|
Sensitive
|
lineage4.8
|
dk
|
SRR6785434
|
Sensitive
|
lineage2.2.1
|
None
|
SRR11972166
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR4796911
|
Sensitive
|
lineage1.2.2.2
|
in
|
SRR22250251
|
Sensitive
|
lineage4.3.3
|
None
|
SRR11972359
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6484883
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2229387
|
Sensitive
|
lineage4.8
|
None
|
SRR22249414
|
Sensitive
|
lineage1.1.2
|
None
|
ERR553248
|
Sensitive
|
lineage4.5
|
None
|
ERR2229666
|
Sensitive
|
lineage4.8
|
None
|
ERR2229025
|
Sensitive
|
lineage4.8
|
None
|
SRR22251775
|
Sensitive
|
lineage3
|
None
|
ERR2229557
|
Sensitive
|
lineage4.8
|
None
|
SRR6785296
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6484928
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6785178
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229731
|
Sensitive
|
lineage4.8
|
None
|
SRR1002689
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1002680
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2229722
|
Sensitive
|
lineage4.8
|
None
|
SRR11972171
|
RR-TB
|
lineage2.2.2
|
None
|
SRR6785412
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4827915
|
Sensitive
|
lineage2.2.1
|
None
|
ERR551902
|
Sensitive
|
lineage4.3.3
|
de
|
ERR9125429
|
Sensitive
|
lineage4.8
|
None
|
ERR2229406
|
Sensitive
|
lineage4.8
|
None
|
ERR2229231
|
Sensitive
|
lineage4.8
|
None
|
ERR11465930
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR6982529
|
MDR-TB
|
lineage4.9.1
|
None
|
SRR22251777
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2229629
|
Sensitive
|
lineage4.8
|
None
|
SRR6785541
|
Sensitive
|
lineage2.2.1
|
None
|
ERR553113
|
HR-TB
|
lineage4.5
|
de
|
ERR4829105
|
Other
|
lineage4.6
|
dj
|
SRR6484976
|
Other
|
lineage2.2.1
|
None
|
ERR2229614
|
Sensitive
|
lineage4.8
|
None
|
ERR2229506
|
Sensitive
|
lineage4.8
|
None
|
SRR6485012
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229665
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229346
|
Sensitive
|
lineage4.8
|
None
|
ERR2229314
|
Sensitive
|
lineage4.8
|
None
|
ERR4827460
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2229017
|
Sensitive
|
lineage4.8
|
dk
|
ERR4827887
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR550954
|
Other
|
La1.7.1
|
None
|
ERR4827457
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR550924
|
Sensitive
|
lineage4
|
de
|
SRR6785237
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6484989
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4972509
|
Pre-XDR-TB
|
lineage4.1.2.1.1
|
None
|
SRR8237323
|
MDR-TB
|
lineage2.2.1
|
np
|
SRR11972439
|
MDR-TB
|
lineage1.1.3
|
None
|
ERR2229026
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229309
|
Sensitive
|
lineage4.8
|
None
|
SRR22250247
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6785206
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1002700
|
Other
|
lineage2.2.1
|
None
|
ERR4830795
|
MDR-TB
|
lineage4.6.5
|
et
|
ERR2229101
|
Sensitive
|
lineage4.8
|
dk
|
ERR4827453
|
Other
|
lineage4.1.2.1
|
None
|
SRR6785442
|
Sensitive
|
lineage4.3.3
|
None
|
ERR2229311
|
Sensitive
|
lineage4.8
|
None
|
SRR6785198
|
Other
|
lineage2.2.1
|
None
|
ERR3132302
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR6785280
|
Sensitive
|
lineage4.8
|
None
|
ERR2229356
|
Sensitive
|
lineage4.8
|
dk
|
SRR6485147
|
Sensitive
|
lineage4.8
|
None
|
ERR2229317
|
Sensitive
|
lineage4.8
|
dk
|
ERR4827423
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5818681
|
Sensitive
|
lineage4.1.2.1
|
dj
|
SRR9738508
|
RR-TB
|
lineage4.8
|
None
|
SRR6484901
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6484981
|
HR-TB
|
lineage4.2.1.1
|
None
|
ERR12976118
|
Other
|
La1.2
|
None
|
SRR22461708
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2510317
|
MDR-TB
|
lineage3
|
pk
|
SAMEA2533589
|
Other
|
La1.7.1
|
de
|
ERR4830833
|
RR-TB
|
lineage4.2
|
et
|
ERR13431999
|
Sensitive
|
lineage4.1.1.2
|
None
|
SRR29127025
|
Other
|
lineage1.2.1.2
|
None
|
SRR29342478
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR29342495
|
Sensitive
|
lineage4.3.2
|
None
|
SRR29601149
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR22251797
|
Sensitive
|
lineage3
|
None
|
ERR2229395
|
Sensitive
|
lineage4.8
|
None
|
ERR551483
|
Sensitive
|
lineage4.2.1.1
|
de
|
ERR2229539
|
Sensitive
|
lineage4.8
|
None
|
ERR4827434
|
HR-TB
|
lineage2.2.1
|
None
|
SRR18111724
|
Sensitive
|
lineage4.9
|
None
|
ERR2229728
|
Sensitive
|
lineage4.8
|
dk
|
SRR24466746
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR2229616
|
Sensitive
|
lineage4.8
|
dk
|
SRR6785460
|
Sensitive
|
lineage4.2.1
|
None
|
ERR11466529
|
Sensitive
|
lineage4.8
|
None
|
SRR6484874
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10525331
|
RR-TB
|
lineage4.8
|
None
|
SRR16058233
|
Sensitive
|
lineage4.8
|
None
|
ERR2229380
|
Sensitive
|
lineage4.8
|
None
|
ERR11465978
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR6485155
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2202630
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2229391
|
Sensitive
|
lineage4.8
|
None
|
ERR552577
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2229254
|
Sensitive
|
lineage4.8
|
dk
|
ERR551549
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR6785476
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229430
|
Sensitive
|
lineage4.8
|
dk
|
SRR1002697
|
Sensitive
|
lineage4.2.1.1
|
None
|
SRR14519655
|
Sensitive
|
lineage1.2.1
|
None
|
ERR2229548
|
Sensitive
|
lineage4.8
|
None
|
SRR6485032
|
Other
|
lineage4.3.3
|
None
|
ERR552860
|
Sensitive
|
lineage4.1.2.1
|
de
|
ERR2510289
|
MDR-TB
|
lineage3
|
None
|
ERR2229421
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229291
|
Sensitive
|
lineage4.8
|
None
|
ERR2229097
|
Sensitive
|
lineage4.8
|
dk
|
ERR4830825
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR2229762
|
Sensitive
|
lineage4.8
|
None
|
SRR6785417
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3103478
|
Sensitive
|
lineage4.8
|
None
|
SRR6785277
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2229156
|
Sensitive
|
lineage4.8
|
None
|
SRR5431794
|
Other
|
La1.8.1
|
None
|
ERR2229127
|
Sensitive
|
lineage4.8
|
None
|
SRR6785158
|
Sensitive
|
lineage4.3.3
|
None
|
SRR6785223
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6785244
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6485015
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2229265
|
Sensitive
|
lineage4.8
|
dk
|
ERR4863405
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
SRR6485035
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16058509
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR2229084
|
Sensitive
|
lineage4.8
|
dk
|
ERR552092
|
Sensitive
|
lineage4.1.2.1
|
de
|
ERR2229286
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229505
|
Sensitive
|
lineage4.8
|
None
|
SRR5818602
|
MDR-TB
|
lineage3
|
dj
|
SRR19303881
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR6785329
|
Sensitive
|
lineage2.2.1
|
None
|
ERR8773511
|
Sensitive
|
lineage4.8
|
None
|
SRR6484972
|
Other
|
lineage2.2.1
|
None
|
SRR22250214
|
Sensitive
|
lineage4.7
|
None
|
ERR2229274
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229106
|
Sensitive
|
lineage4.8
|
dk
|
SRR6785320
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6785245
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229378
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229553
|
Sensitive
|
lineage4.8
|
None
|
ERR2229330
|
Sensitive
|
lineage4.8
|
dk
|
ERR4827899
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229126
|
Sensitive
|
lineage4.8
|
dk
|
SRR22249880
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR2229588
|
Sensitive
|
lineage4.8
|
None
|
ERR2229751
|
Sensitive
|
lineage4.8
|
None
|
SRR6785331
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229577
|
Sensitive
|
lineage4.8
|
None
|
ERR2229734
|
Sensitive
|
lineage4.8
|
dk
|
SRR21733274
|
Sensitive
|
lineage3.1.1
|
None
|
ERR4798526
|
Sensitive
|
lineage2.2.1
|
in
|
SRR6485153
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3132136
|
RR-TB
|
lineage2.2.1
|
None
|
SRR22251492
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2041693
|
MDR-TB
|
lineage4.1.2.1
|
rs
|
ERR4828782
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11466392
|
Sensitive
|
lineage4.1.1;lineage4.1.2
|
None
|
ERR7902773
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR6485058
|
Sensitive
|
lineage4.2.1.1
|
None
|
SRR6484930
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2229754
|
Sensitive
|
lineage4.4.1.1;lineage4.8
|
None
|
ERR2229598
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229393
|
Sensitive
|
lineage4.8
|
None
|
ERR2229677
|
Sensitive
|
lineage4.8
|
dk
|
SRR1002695
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6485139
|
Other
|
lineage4.8
|
None
|
SRR6785419
|
HR-TB
|
lineage4.3.3
|
None
|
SRR6785332
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2229108
|
Sensitive
|
lineage4.8
|
dk
|
ERR550730
|
Sensitive
|
lineage4.3
|
de
|
ERR2228868
|
Sensitive
|
lineage4.8
|
None
|
SRR6785275
|
Sensitive
|
lineage4.8
|
None
|
SRR6785376
|
Sensitive
|
lineage4.2.1.1
|
None
|
SRR8600128
|
Other
|
La1.8.1
|
None
|
SRR6785355
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6785483
|
Sensitive
|
lineage4.7
|
None
|
SRR6785502
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6785359
|
HR-TB
|
lineage2.2.1
|
None
|
ERR9882552
|
Sensitive
|
lineage4.9
|
None
|
SRR6785172
|
Sensitive
|
lineage4.2.1.1
|
None
|
ERR1193811
|
Sensitive
|
lineage4.3.3
|
kz
|
SRR6785531
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1193805
|
Sensitive
|
lineage4.3.3
|
tr
|
ERR2229491
|
Sensitive
|
lineage4.9
|
None
|
SRR10500312
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
ERR2229740
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229700
|
Sensitive
|
lineage4.8
|
None
|
ERR2229306
|
Sensitive
|
lineage4.8
|
dk
|
SRR6485149
|
HR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
SRR6484954
|
Sensitive
|
lineage4.2.1
|
None
|
ERR2229349
|
Sensitive
|
lineage4.8
|
dk
|
SRR6785195
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6485011
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11466010
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR551867
|
Sensitive
|
lineage4.6.2.2
|
de
|
ERR12268392
|
Sensitive
|
lineage4.3.3
|
None
|
ERR551498
|
Sensitive
|
lineage1.2.1.2.1
|
de
|
ERR9125396
|
Sensitive
|
lineage4.8
|
None
|
SRR19303879
|
Sensitive
|
lineage4.8
|
None
|
ERR553239
|
Sensitive
|
lineage4.1.2
|
de
|
SRR6785375
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229485
|
Sensitive
|
lineage4.8
|
None
|
ERR551143
|
Sensitive
|
lineage4.7
|
de
|
ERR2229750
|
Sensitive
|
lineage4.8
|
None
|
ERR2229354
|
Sensitive
|
lineage4.8
|
dk
|
SRR6785389
|
HR-TB
|
lineage4.2.1.1
|
None
|
ERR2229320
|
Sensitive
|
lineage4.8
|
None
|
ERR2229462
|
Sensitive
|
lineage4.8
|
None
|
ERR2229510
|
Sensitive
|
lineage4.8
|
None
|
ERR2200146
|
Sensitive
|
lineage4.9
|
None
|
ERR2510721
|
Sensitive
|
lineage4.1.2.1
|
it
|
ERR2229263
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229047
|
Sensitive
|
lineage4.8
|
dk
|
ERR552020
|
HR-TB
|
lineage4.8
|
de
|
SRR6257043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6785241
|
RR-TB
|
lineage4.8
|
None
|
ERR2229119
|
Sensitive
|
lineage4.8
|
None
|
SRR22251420
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR7362041
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR11823429
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR4829995
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR6785335
|
Other
|
lineage4.3.3
|
None
|
SRR1791740
|
Other
|
La1.8.1
|
None
|
ERR4827474
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6485125
|
Sensitive
|
lineage4.8
|
None
|
ERR552055
|
Sensitive
|
lineage4.8
|
de
|
ERR9786672
|
Other
|
lineage4.3.4.2
|
None
|
ERR2229635
|
Sensitive
|
lineage4.8
|
None
|
SRR6785379
|
HR-TB
|
lineage2.2
|
None
|
SRR21798476
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR6785232
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229445
|
Sensitive
|
lineage4.8
|
None
|
ERR12976170
|
Other
|
La1.2
|
None
|
ERR12976172
|
Other
|
La1.2
|
None
|
ERR13289475
|
HR-TB
|
lineage4.3.3
|
None
|
ERR13289477
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13289510
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR29440654
|
Sensitive
|
lineage3
|
None
|
SRR29440945
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR29440971
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR29440609
|
Sensitive
|
lineage1.1
|
None
|
SRR29126432
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR5818679
|
HR-TB
|
lineage4.3
|
dj
|
ERR551489
|
Sensitive
|
lineage4.8
|
de
|
ERR2229269
|
Sensitive
|
lineage4.8
|
dk
|
ERR2510855
|
Sensitive
|
lineage4.8
|
it
|
SRR14296115
|
Other
|
La1.8.1
|
None
|
ERR4827461
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5818702
|
Sensitive
|
lineage4.2.2.2
|
dj
|
ERR4798777
|
Sensitive
|
lineage4.8
|
in
|
ERR2229216
|
Sensitive
|
lineage4.8
|
dk
|
SRR16058038
|
Sensitive
|
lineage4.8
|
None
|
ERR2229404
|
Sensitive
|
lineage4.8
|
None
|
SRR6485081
|
Sensitive
|
lineage4.8
|
None
|
ERR2229324
|
Sensitive
|
lineage4.8
|
None
|
SRR22251503
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2229267
|
Sensitive
|
lineage4.8
|
dk
|
ERR1465867
|
Sensitive
|
lineage4.8
|
None
|
ERR2229007
|
Sensitive
|
lineage4.8
|
None
|
ERR2229130
|
Sensitive
|
lineage4.8
|
None
|
SRR6485001
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18111725
|
Sensitive
|
lineage4.9
|
None
|
SRR11972405
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR6785186
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR2229454
|
Sensitive
|
lineage4.8
|
dk
|
ERR4829845
|
MDR-TB
|
lineage2.2.1
|
it
|
SRR6484973
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2229132
|
Sensitive
|
lineage4.8
|
None
|
ERR2229284
|
Sensitive
|
lineage4.8
|
None
|
SRR22250255
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
SRR22251497
|
Sensitive
|
lineage3
|
None
|
ERR4020182
|
MDR-TB
|
lineage4.3.4.2.1;lineage4.4.1.1
|
None
|
ERR551686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2229543
|
Sensitive
|
lineage4.8
|
dk
|
SRR10766998
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR6484996
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2229352
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229573
|
Sensitive
|
lineage4.8
|
None
|
ERR2229381
|
Sensitive
|
lineage4.8
|
None
|
ERR2229061
|
Sensitive
|
lineage4.8
|
dk
|
SRR8600254
|
Other
|
La1.8.1
|
None
|
SRR19303885
|
Sensitive
|
lineage1.2.2.2
|
None
|
SRR2502864
|
Sensitive
|
lineage4.8
|
None
|
SRR6785319
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR22249393
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR6785432
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2229300
|
Sensitive
|
lineage4.8
|
None
|
ERR11465965
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR6257063
|
Sensitive
|
lineage4.2.1.1
|
None
|
ERR2229664
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229379
|
Sensitive
|
lineage4.8
|
None
|
ERR2229110
|
Sensitive
|
lineage4.8
|
None
|
SRR6485039
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR11823425
|
Sensitive
|
lineage4.9
|
None
|
ERR552202
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR22251496
|
Sensitive
|
lineage4.8.1
|
None
|
ERR552096
|
Sensitive
|
lineage4.4.1.1
|
de
|
SRR6484980
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6785203
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4827459
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2229730
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229619
|
Sensitive
|
lineage4.8
|
dk
|
SRR16058230
|
Sensitive
|
lineage4.8
|
None
|
SRR6484878
|
HR-TB
|
lineage4.2.1
|
None
|
ERR11465936
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR6785180
|
Sensitive
|
lineage4.8
|
None
|
ERR9125348
|
Sensitive
|
lineage4.8
|
None
|
ERR2229625
|
Sensitive
|
lineage4.8
|
dk
|
ERR2229386
|
Sensitive
|
lineage4.8;lineage4.9
|
None
|
SRR6785468
|
Sensitive
|
lineage4.8
|
None
|
ERR2229280
|
Sensitive
|
lineage4.8
|
dk
|
ERR2510672
|
Pre-XDR-TB
|
lineage4.2.1
|
it
|
SRR8758894
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2229312
|
Sensitive
|
lineage4.8
|
None
|
SRR11972458
|
Sensitive
|
lineage1.1.2
|
None
|
ERR2229511
|
Sensitive
|
lineage4.8
|
None
|
ERR4831787
|
HR-TB
|
lineage4.4.2
|
vn
|
SRR22249458
|
Sensitive
|
lineage4.3.3
|
None
|
ERR2229735
|
Sensitive
|
lineage4.8
|
dk
|
ERR4829305
|
Sensitive
|
lineage1.1.2
|
None
|
SRR6257037
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3132258
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR2229173
|
Sensitive
|
lineage4.8
|
None
|
ERR2229151
|
Other
|
lineage4.8
|
dk
|
SRR6785418
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11466011
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR3132243
|
Other
|
lineage1.1.3.1
|
None
|
SRR6484937
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2229189
|
Sensitive
|
lineage4.8
|
dk
|
SRR11972464
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6484956
|
Sensitive
|
lineage4.5
|
None
|
SRR6785224
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR6785363
|
Sensitive
|
lineage2.2.1
|
None
|
SRR22251481
|
Sensitive
|
lineage4.8
|
None
|
SRR5818601
|
HR-TB
|
lineage4.2.2.2
|
dj
|
SRR6785508
|
HR-TB
|
lineage2.2.1
|
None
|
SRR12882766
|
Sensitive
|
lineage3.1.1
|
None
|
SRR11972432
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2229365
|
Sensitive
|
lineage4.8
|
None
|
ERR2229729
|
Sensitive
|
lineage4.8
|
None
|
SRR7851315
|
Other
|
La1.8.2
|
None
|
ERR4827444
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6785210
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6785285
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6484994
|
Other
|
lineage2.2.1
|
None
|
ERR2229122
|
Sensitive
|
lineage4.8
|
None
|
SRR9217355
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR12006633
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
ERR2229487
|
Sensitive
|
lineage4.8
|
None
|
ERR4830870
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
ERR2229232
|
Sensitive
|
lineage4.8
|
None
|
ERR4830848
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR6485079
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1465985_ERR1465884
|
Sensitive
|
lineage4.7
|
None
|
SRR5818697
|
MDR-TB
|
lineage1.1.2
|
dj
|
ERR2510682
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
ERR4827917
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR7851364
|
Other
|
La1.8.1
|
None
|
ERR2229657
|
Sensitive
|
lineage4.8
|
None
|
SRR22251475
|
Sensitive
|
lineage3
|
None
|
SRR6485082
|
Sensitive
|
lineage2.2.1;lineage4.8
|
None
|
ERR4830000
|
RR-TB
|
lineage4.6.2.2
|
None
|
ERR2229465
|
Sensitive
|
lineage4.8
|
dk
|